Information report for PPR2263
Gene Details
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Functional Descriptions
- The phenotypic and molecular characterization of the pentatricopeptide repeat2263 (PPR2263) mutant characterized by a reduced kernel size and a severely stunted vegetative apparatus.
- PPR2263 encodes a protein required for RNA editing in mitochondrial nad5 and cob transcript.
- PPR2263, a DYW-Subgroup Pentatricopeptide Repeat Protein, Is Required for Mitochondrial nad5 and cob Transcript Editing, Mitochondrion Biogenesis, and Maize Growth.
- In maize, the corresponding PPR2263 mutation causes growth defects in kernels and seedlings.
- The PPR2263 mutant harbors mitochondria that lack complex III and have a compromised ultrastructure, generally increased transcript levels, and higher levels of alternative oxidase protein.
Functional Keywords
Literature and News
Gene Resources
- NCBI ID: LOC103637971
- UniProt accessions: K7VA15
- EMBL: CM000785
- EnsemblPlants: Zm00001eb374510_T001
- Gramene: Zm00001eb374510_T001
- KEGG: zma:103637971
- OMA: VYCRLNE
- ExpressionAtlas: Zm00001eb374510
- InterPro: IPR002885 , IPR011990 , IPR032867 , IPR046848 , IPR046960
- PANTHER: PTHR24015 , PTHR24015:SF1695
- SUPFAM: SSF48452
- PROSITE: PS51375
- Gene3D: 1.25.40.10
- OrthoDB: K7VA15
- SMR: K7VA15
Homologs
- Arabidopsis thaliana: AT3G12770, AT2G29760, AT3G11460, AT3G22690, AT3G49170
- Brassica rapa: Brara.I04422
- Gossypium hirsutum: Gh_A13G0768
- Oryza sativa: OsPPR16
- Rosa chinensis: RchiOBHm_Chr5g0011421
- Saccharum spontaneum: Sspon.02G0050800-1C
Sequences
cDNA Sequence
- >Zm00001eb374510_T001
CCTCACGATCGCATCCGCATTCCGCACGGCCCCGGTAGCGGCCAGCGACATGTCTCCTTCCCGCCTCGTCCTCCCTCCGCCCGCCGGCGACCCAGGCGGCGGACTGCGGCGCTCTTACCTCCGCCTTGTCGCCCTATCATCCACGCCCCGCCACCTTGACCAGCTCCTCGCAGTCTCGCTCGCCTCCGGCCACTACGCGCTCGACCCGGCCCCGGCCACCGCGCTGCTGCTCCGCTACGCCTCCCTCCGTGCGCCGCCCAGCCACCTTCTCCGCCTCTTCCGCGCCTTCCCCTGCCCCGACCGGTTCCTCCGAAATGCGCTGCTACGCTCCCTCCCGTCCCTCCGCCCGCACCTCCTCTTCCCGTCGCCGGACTCGTTCTCCTTCGCCTTCGCCGCCACCTCGCTCTCCTCTTCCTGTTCCTCCCGTGGCAACGACGCTGCTGCCGCACGCACGCTTCACGGGCTCTCCGTGGCCGCGGGGTACGCGGCGGACACGTTCGTAGCGTCAGCTCTGGCCAAGCTCTACTTCAAGCTGTCAAGAGGGGACGACGCACGCAAGGTGTTCGACACGGTGCCGTCGCCCGACACTATCTTGTGGAACACGCTGCTCGCTGGTTTGCCTGGATCGGAGGCCCTGGAGGCGTTCGTGCGGATGGTGGATGCTGGGAGAGTGCGACCTGACTCAACCACCCTTGCATCCAGCCTACGGGCAGCGGCAGAAGCATCACATATGGCAATGGGGAGGTGCGTCCATGGATATGGCGTGAAGTGCGGGTTGGCAGAGCATGAGCATGTTGTGACTGGGCTCATGTCGCTCTATTCAAAGTGCGGGGACATGGACTCTGCACAGTTTCTCTTTGATAGGATGGACAATCCAGATTTGGTTGCCTACAATGCTTTGATCTCAGGCTACTCAGTCAATGGCATGGTTGAATCATCGGTGGAGTTGTTCAAAGAGTTGACGGCCTCAGGCTGGAGGCCAAACTCAAGCACGTTGGTTGCGGTGATACCGGTGTACAGTCCATTTGGGCATGAGCTGCTTGCTCGGTGCTTACATGCGTTTGTTGTCAAGGCCAGGTTAGATGCAGATGCTCTGGTGTCAACAGCACTGACCACTTTGTACTGTAGATTAAACGATATGGAGTCTGCAAGGAGCATATTTGATGCAATGCTAGAGAAGACCATGGAATCATGGAATGCAATGATATCCGGGTATGCCCAGAACGGCTTGACGGAGATGGCAGTTGCACTTTTCCAGCTAATGCAGGAGCTCAATGTGCAGCCGAACCCCATCACTATTTCAAGCACTCTTTCAGCCTGTGCACATCTTGGAGCTTTGTCTCTGGGGAAGTGGGTTCACAGGATCATCTCCAAGGAGAAACTTGAGCTCAATGTCTACGTCATGACAGCGCTCATTGACATGTATGCGAAATGTGGAAGCATTGCTGAAGCTCGGAGCATCTTTGACAGAATGGATAACAAGAATGTAGTCTCCTGGAATGCGATGATATCTGGATACGGTCTCCATGGCCAAGGTGCTGAAGCTTTGAAGCTCTACAAGGATATGTTGGATGCACGCATTCTTCCAACAAGCTCCACCTTCCTGTCGGTGATCTACGCATGCAGCCATGGAGGATTGGTTGACGAAGGGCAGAAAGTTTTCCGCGTAATGACTAATGAGTACAGGATCACCCCAGGTATCGAGCATTGCACATGTATGGTAGACCTTCTTGGTCGGGCAGGCAAACTGAATGAAGCTTTGGAGCTCATATCTGAATTCCCTCAAAGTGCCATTGGACCTGGCGTGTGGGGAGCGCTGCTAGGTGCTTGCATGGTCCATAAAAATAGTGACCTAGCAAAATTGGCATCCCAGAAGTTGTTCGAACTAGACTCAGAGAATGCGGGCTACTACGTGCTCCTATCTAATCTGTACACATCCAAGAAGCATTACTCTGAAGCAGCTGTGGTGAGACAAGAGGCCAAGACCAGGAAGCTGGTGAAAACACCAGGGTGTACTCTCATCGAGATAGGCGACAGGCCTCATGTATTCATGGCTGGTGACCATCTTCACCCACAATCAGAGGCTATCTACTCATACTTAGAGAGGTTAACCGCAAAGATGATTGAAGCTGGGTACCAGCCTGTGACAGAGGCTGCATTGTACGATGTTGAGGAGGAAGAGAAGGAGCACATGGTAAAGGTGCACAGCGAGAAGTTGGCCATCGCCTTTGGGCTCCTTAGTACAGAGCCGGGGACAGAGATCAGGATCATCAAGAACCTTAGGGTTTGCCTGGACTGCCATAACGCTACCAAGTTCATATCCAAAGTGACACAGAGGTTGATTGTAGTTAGGGATGCATCGAGATTTCACCATTTCAGAGACGGGGTTTGCTCCTGTGGTGATTACTGGTGATTCACAACAGATAGCTTGAAAACTTTGAACTTTAAAAAACTAATTGTCCAGAAGCACTTCTCATTGTGCTCAAGTGTTGAAGCTTAAGTACAGAGCGTCATTTCCATTTAGCAGCTGGGAGCTACCAGAATTAACTGATAACCAGCAACTGATTTCGGGCTTCCTCTACAGCGACAATATTCATTAATCCAAGCTACAATTTCACTGGATCATAGAAAATCATACCAATCCATGCTTGAAATTTCACTGCCGCGCAACAGACATCGTGCTGAAGCAATAAGACATCATATTCTAGATTGAATCAATCATTCAATTGTCAATTGGGCAGACTACAGAACGATACATAGTTTTGGCAAACAAGATAACGGAAGGAGCTGTAGTGCTGTACAGACTACCTAGAATCACTAAAAGCTAAGGCAAACTCTACCAGTTGTTTTCTTTGATGCCAATGTATTATCACTTCGATTTTTAACGTTAATGGAGGGTAAGAGCATCTCCAAGAGTTTCC
CDS Sequence
- >Zm00001eb374510_T001
ATGTCTCCTTCCCGCCTCGTCCTCCCTCCGCCCGCCGGCGACCCAGGCGGCGGACTGCGGCGCTCTTACCTCCGCCTTGTCGCCCTATCATCCACGCCCCGCCACCTTGACCAGCTCCTCGCAGTCTCGCTCGCCTCCGGCCACTACGCGCTCGACCCGGCCCCGGCCACCGCGCTGCTGCTCCGCTACGCCTCCCTCCGTGCGCCGCCCAGCCACCTTCTCCGCCTCTTCCGCGCCTTCCCCTGCCCCGACCGGTTCCTCCGAAATGCGCTGCTACGCTCCCTCCCGTCCCTCCGCCCGCACCTCCTCTTCCCGTCGCCGGACTCGTTCTCCTTCGCCTTCGCCGCCACCTCGCTCTCCTCTTCCTGTTCCTCCCGTGGCAACGACGCTGCTGCCGCACGCACGCTTCACGGGCTCTCCGTGGCCGCGGGGTACGCGGCGGACACGTTCGTAGCGTCAGCTCTGGCCAAGCTCTACTTCAAGCTGTCAAGAGGGGACGACGCACGCAAGGTGTTCGACACGGTGCCGTCGCCCGACACTATCTTGTGGAACACGCTGCTCGCTGGTTTGCCTGGATCGGAGGCCCTGGAGGCGTTCGTGCGGATGGTGGATGCTGGGAGAGTGCGACCTGACTCAACCACCCTTGCATCCAGCCTACGGGCAGCGGCAGAAGCATCACATATGGCAATGGGGAGGTGCGTCCATGGATATGGCGTGAAGTGCGGGTTGGCAGAGCATGAGCATGTTGTGACTGGGCTCATGTCGCTCTATTCAAAGTGCGGGGACATGGACTCTGCACAGTTTCTCTTTGATAGGATGGACAATCCAGATTTGGTTGCCTACAATGCTTTGATCTCAGGCTACTCAGTCAATGGCATGGTTGAATCATCGGTGGAGTTGTTCAAAGAGTTGACGGCCTCAGGCTGGAGGCCAAACTCAAGCACGTTGGTTGCGGTGATACCGGTGTACAGTCCATTTGGGCATGAGCTGCTTGCTCGGTGCTTACATGCGTTTGTTGTCAAGGCCAGGTTAGATGCAGATGCTCTGGTGTCAACAGCACTGACCACTTTGTACTGTAGATTAAACGATATGGAGTCTGCAAGGAGCATATTTGATGCAATGCTAGAGAAGACCATGGAATCATGGAATGCAATGATATCCGGGTATGCCCAGAACGGCTTGACGGAGATGGCAGTTGCACTTTTCCAGCTAATGCAGGAGCTCAATGTGCAGCCGAACCCCATCACTATTTCAAGCACTCTTTCAGCCTGTGCACATCTTGGAGCTTTGTCTCTGGGGAAGTGGGTTCACAGGATCATCTCCAAGGAGAAACTTGAGCTCAATGTCTACGTCATGACAGCGCTCATTGACATGTATGCGAAATGTGGAAGCATTGCTGAAGCTCGGAGCATCTTTGACAGAATGGATAACAAGAATGTAGTCTCCTGGAATGCGATGATATCTGGATACGGTCTCCATGGCCAAGGTGCTGAAGCTTTGAAGCTCTACAAGGATATGTTGGATGCACGCATTCTTCCAACAAGCTCCACCTTCCTGTCGGTGATCTACGCATGCAGCCATGGAGGATTGGTTGACGAAGGGCAGAAAGTTTTCCGCGTAATGACTAATGAGTACAGGATCACCCCAGGTATCGAGCATTGCACATGTATGGTAGACCTTCTTGGTCGGGCAGGCAAACTGAATGAAGCTTTGGAGCTCATATCTGAATTCCCTCAAAGTGCCATTGGACCTGGCGTGTGGGGAGCGCTGCTAGGTGCTTGCATGGTCCATAAAAATAGTGACCTAGCAAAATTGGCATCCCAGAAGTTGTTCGAACTAGACTCAGAGAATGCGGGCTACTACGTGCTCCTATCTAATCTGTACACATCCAAGAAGCATTACTCTGAAGCAGCTGTGGTGAGACAAGAGGCCAAGACCAGGAAGCTGGTGAAAACACCAGGGTGTACTCTCATCGAGATAGGCGACAGGCCTCATGTATTCATGGCTGGTGACCATCTTCACCCACAATCAGAGGCTATCTACTCATACTTAGAGAGGTTAACCGCAAAGATGATTGAAGCTGGGTACCAGCCTGTGACAGAGGCTGCATTGTACGATGTTGAGGAGGAAGAGAAGGAGCACATGGTAAAGGTGCACAGCGAGAAGTTGGCCATCGCCTTTGGGCTCCTTAGTACAGAGCCGGGGACAGAGATCAGGATCATCAAGAACCTTAGGGTTTGCCTGGACTGCCATAACGCTACCAAGTTCATATCCAAAGTGACACAGAGGTTGATTGTAGTTAGGGATGCATCGAGATTTCACCATTTCAGAGACGGGGTTTGCTCCTGTGGTGATTACTGGTGA
Protein Sequence
- >Zm00001eb374510_P001
MSPSRLVLPPPAGDPGGGLRRSYLRLVALSSTPRHLDQLLAVSLASGHYALDPAPATALLLRYASLRAPPSHLLRLFRAFPCPDRFLRNALLRSLPSLRPHLLFPSPDSFSFAFAATSLSSSCSSRGNDAAAARTLHGLSVAAGYAADTFVASALAKLYFKLSRGDDARKVFDTVPSPDTILWNTLLAGLPGSEALEAFVRMVDAGRVRPDSTTLASSLRAAAEASHMAMGRCVHGYGVKCGLAEHEHVVTGLMSLYSKCGDMDSAQFLFDRMDNPDLVAYNALISGYSVNGMVESSVELFKELTASGWRPNSSTLVAVIPVYSPFGHELLARCLHAFVVKARLDADALVSTALTTLYCRLNDMESARSIFDAMLEKTMESWNAMISGYAQNGLTEMAVALFQLMQELNVQPNPITISSTLSACAHLGALSLGKWVHRIISKEKLELNVYVMTALIDMYAKCGSIAEARSIFDRMDNKNVVSWNAMISGYGLHGQGAEALKLYKDMLDARILPTSSTFLSVIYACSHGGLVDEGQKVFRVMTNEYRITPGIEHCTCMVDLLGRAGKLNEALELISEFPQSAIGPGVWGALLGACMVHKNSDLAKLASQKLFELDSENAGYYVLLSNLYTSKKHYSEAAVVRQEAKTRKLVKTPGCTLIEIGDRPHVFMAGDHLHPQSEAIYSYLERLTAKMIEAGYQPVTEAALYDVEEEEKEHMVKVHSEKLAIAFGLLSTEPGTEIRIIKNLRVCLDCHNATKFISKVTQRLIVVRDASRFHHFRDGVCSCGDYW