Gene Details:
- Gene ID: Zm00001eb094330
- Gene Symbol: PBF1 ZmDOF3 ZmDof13
- Gene Name: prolamin-box binding factor1
- Genome: Zm-B73-REFERENCE-NAM-5.0
- Species: Zea mays
Functional Descriptions:
- Loss of PBF1 altered accumulation of starch and proteins in endosperm.
- Under different N conditions, PBF1 protein levels remained stable but PBF1 bound different sets of target genes, especially genes related to the biosynthesis and accumulation of N and C storage products.
- Nitrogen-dependent binding of the transcription factor PBF1 contributes to the balance of protein and carbohydrate storage in maize endosperm.
- PBF1 promotes zein accumulation in the endosperm.
- PBF1 modulates C and N metabolism during endosperm development in an N-dependent manner.
Function-related keywords:
- nitrogen , transcription-factor , development , starch , endosperm , endosperm-development , starch-biosynthesis , starch-accumulation
Literature:
- Nitrogen-dependent binding of the transcription factor PBF1 contributes to the balance of protein and carbohydrate storage in maize endosperm. DOI: 10.1093/plcell/koac302 ; PMID: 36222567
Related News:
Gene Resources:
- NCBI ID: 542353
- UniProt accessions: A0A3L6FRB9
Sequences:
cDNA Sequence
- >Zm00001eb094330_T001
GTCCCTCACACCATACATCCATCTTGCTCACTCCTTTTTCTCTCTATAAACAACTAAAGGAGGCATCTCTCACATCATCATCATATCTCTTTACCCCTTCTTCCCAGCGACAAGAGAAAGGATTAGAAAAAGGAAAGATCCATGGACATGATCTCCGGCAGCACTGCAGCAACATCAACACCCCACAACAACCAACAGGCGGTGATGTTGTCATCCCCCATTATAAAGGAGGAAGCTAGGGACCCAAAGCAGACACGAGCCATGCCCCAAATAGGTGGCAGTGGGGAGCGTAAGCCGAGGCCGCAACTACCTGAGGCGCTCAAGTGCCCACGCTGCGACTCCAACAACACCAAGTTTTGCTACTACAACAATTATAGCATGTCACAACCACGCTACTTTTGCAAGGCTTGCCGCCGCTATTGGACACATGGTGGTACCCTCCGCAATGTCCCCATTGGTGGTGGGTGTCGCAAGAACAAACATGCCTCTAGATTTGTCTTGGGCTCTCACACCTCATCGTCCTCATCTGCTACCTATGCACCATTATCCCCTAGCACCAACGCTAGCTCTAGCAATATGAGCATCAACAAACATATGATGATGGTGCCTAACATGACGATGCCTACCCCAACGACAATGGGCTTATTCCCTAATGTGCTCCCAACACTTATGCCGACAGGTGGAGGCGGGGGCTTTGACTTCACTATGGACAACCAACATAGATCATTGTCCTTCACACCAATGTCTCTACCTAGCCAGGGGCCAGTGCCTATGCTGGCTGCAGGAGGGAGTGAGGCAACACCGTCTTTCCTAGAGATGCTGAGAGGAGGGATTTTTCATGGTAGTAGTAGCTATAACACAAGTCTCACGATGAGTGGTGGCAACAATGGAATGGACAAGCCATTTTCGCTGCCATCATATGGTGCAATGTGCACAAATGGGTTGAGTGGCTCAACCACTAATGATGCCAGACAACTGGTGGGGCCTCAGCAGGATAACAAGGCCATCATGAAGAGCAGTAATAACAACAATGGTGTATCATTGTTGAACCTCTACTGGAACAAGCACAACAACAACAACAACAACAACAACAACAACAACAACAACAAGGGACAATAAGGTTAGTGTGCCAGACCGTGGAAGCGTTGCTGCTATAAATAATGCAATTGGGTAGTAGTACCCAGTGAAATCAGGAGAGACTAGTAGCCTAGGGTGCATTTTGATTTATTTAGTTTTGGTCAAGATGACAAGTCATCATGAATCACCCTTTTTATTCATTTGCATGTTTTGATGAGAGTTCATTTGCAGTAAGCTATATATCATTGGATAATTAATCATTTGGTTGGATCATCAGTTCCTA
CDS Sequence
- >Zm00001eb094330_T001
ATGGACATGATCTCCGGCAGCACTGCAGCAACATCAACACCCCACAACAACCAACAGGCGGTGATGTTGTCATCCCCCATTATAAAGGAGGAAGCTAGGGACCCAAAGCAGACACGAGCCATGCCCCAAATAGGTGGCAGTGGGGAGCGTAAGCCGAGGCCGCAACTACCTGAGGCGCTCAAGTGCCCACGCTGCGACTCCAACAACACCAAGTTTTGCTACTACAACAATTATAGCATGTCACAACCACGCTACTTTTGCAAGGCTTGCCGCCGCTATTGGACACATGGTGGTACCCTCCGCAATGTCCCCATTGGTGGTGGGTGTCGCAAGAACAAACATGCCTCTAGATTTGTCTTGGGCTCTCACACCTCATCGTCCTCATCTGCTACCTATGCACCATTATCCCCTAGCACCAACGCTAGCTCTAGCAATATGAGCATCAACAAACATATGATGATGGTGCCTAACATGACGATGCCTACCCCAACGACAATGGGCTTATTCCCTAATGTGCTCCCAACACTTATGCCGACAGGTGGAGGCGGGGGCTTTGACTTCACTATGGACAACCAACATAGATCATTGTCCTTCACACCAATGTCTCTACCTAGCCAGGGGCCAGTGCCTATGCTGGCTGCAGGAGGGAGTGAGGCAACACCGTCTTTCCTAGAGATGCTGAGAGGAGGGATTTTTCATGGTAGTAGTAGCTATAACACAAGTCTCACGATGAGTGGTGGCAACAATGGAATGGACAAGCCATTTTCGCTGCCATCATATGGTGCAATGTGCACAAATGGGTTGAGTGGCTCAACCACTAATGATGCCAGACAACTGGTGGGGCCTCAGCAGGATAACAAGGCCATCATGAAGAGCAGTAATAACAACAATGGTGTATCATTGTTGAACCTCTACTGGAACAAGCACAACAACAACAACAACAACAACAACAACAACAACAACAACAAGGGACAATAA
Protein Sequence
- >Zm00001eb094330_P001
MDMISGSTAATSTPHNNQQAVMLSSPIIKEEARDPKQTRAMPQIGGSGERKPRPQLPEALKCPRCDSNNTKFCYYNNYSMSQPRYFCKACRRYWTHGGTLRNVPIGGGCRKNKHASRFVLGSHTSSSSSATYAPLSPSTNASSSNMSINKHMMMVPNMTMPTPTTMGLFPNVLPTLMPTGGGGGFDFTMDNQHRSLSFTPMSLPSQGPVPMLAAGGSEATPSFLEMLRGGIFHGSSSYNTSLTMSGGNNGMDKPFSLPSYGAMCTNGLSGSTTNDARQLVGPQQDNKAIMKSSNNNNGVSLLNLYWNKHNNNNNNNNNNNNNKGQ
Source: Genetic information comes from the article