Gene Details:
- Gene ID: Zm00001eb336870
- Gene Symbol: OCD1 ZmOCD1
- Gene Name: oxalyl-CoA decarboxylase1
- Genome: Zm-B73-REFERENCE-NAM-5.0
- Species: Zea mays
Functional Descriptions:
- Our enzymatic analysis showed that ZmOCD1 catalyzes oxalyl-CoA, the product of O7, into formyl-CoA and CO2 for degradation.
- ZmOCD1 mutants have an opaque phenotype and caused dramatic alterations in the metabolome in the endosperm.
- The OCD1 mutant seeds contain a significantly higher level of oxalate than the wild type, indicating that the OCD1 mutants have a defect in oxalate catabolism.
- ZmOCD1 acts downstream of O7 in oxalate degradation and affects endosperm development, the metabolome, and nutritional quality in maize seeds.
- ZmOCD1 Catalyzes the Breakdown of Oxalyl-CoA into Formyl-CoA and CO2.
Function-related keywords:
Literature:
- Maize Oxalyl-CoA Decarboxylase1 Degrades Oxalate and Affects the Seed Metabolome and Nutritional Quality. DOI: 10.1105/tpc.18.00266 ; PMID: 30201823
Related News:
Gene Resources:
- NCBI ID: LOC100191888
- UniProt accessions: B4FAJ4
Sequences:
cDNA Sequence
- >Zm00001eb336870_T001
GAGACGTTGACCCGTTTTGACCGGAGAAGCAAACTATGCCTAAACAAGCCGCACTCGGCTGCGCCTATGCGCTGCGTCGGGCAGAGACGAAGACAAGCAGGACGTCTTTTCGGCGGACAGCGGACTTCACCGCATACACCGCTACCCGCGCGCAGCCGCGCAGGTGCATCTGCGCCGCCGCCGGCCCGCCGCACCCGCACGTCTCCTTATACCCATCCGGCCATCTACACACTGCAGTCCACGCTCGTGGCACCGCACTCACTCCGAATTCTGAAGCAACAAACACCAGAAGCGCACCAACTCCCCAACCACCGGAGACCGCACCCCAGCAAAGGATGGCATCTGACTCCACGGCCGCCGTGACGGTGGACGGCAGCGCGCTTGCGGGGCGCGCGCTGGCCGCGGCGGGCACGCGGCACATGTTCGGGGTGGTGGGCATCCCCGTCACCTCCCTCGCGTCCCGTGCCGCCGCGGCCGGGGTCCGCTTCCTCGCCTTCCGCAACGAGCAGTCCGCGGGGTACGCCGCCGCCGCCTACGGCTTCCTCACGGGCTCCCCGGGCGCCCTACTCACCGTCTCCGGCCCAGGATGCGTCCACGGGCTCGCGGGCCTCTCCCACGCCACCGCCAACGCCTGGCCGCTCCTCATGATCTCCGGATCCTGCGACCAGGCTGACGCCGGCAGGGGCGACTTCCAGGAGCTCGACCAGATCGCCGCCACTAAGCCCTTCGTCAAGCTCGCCGTCAAGGCAACAACCATCGCCGACATCCCGCGCCTCGTCTTCCAGGCCCTCGCCGCCGCCGTGTCCGGCCGTCCCGGAGGGTGCTACCTCGATATCCCGTCCGATGTCCTCCACCAAACCCTCCCTGAATCCGAGGCCGCGGCTCTCATAGCAGCAGCAGCCGCCAATTCGGCCGCATCCGATCCTTCCCCGTCAAAGCACAAGACTCTTGACGAGGGAATCGCGAAAGCTGCGGACCTGCTCCGGTGTGCGGAGCGGCCTCTTGTTGTGATTGGGAAGGGTGCGGCGTATGCGCGCGCGGAGGAGGCGATTCGGAAGCTGGTGGACACCACGGGCATCCCCTTCCTCCCGACGCCGATGGGGAAAGGGGTCGTGCCTGACTCGCATCCACTCTCCGCCACGGCGGCACGCTCACTCGCCATCGGGCAGTGTGATGTGGCTCTGGTCATCGGTGCTAGGCTTAATTGGTTGCTTCACTTTGGCGAGCCACCCAAGTGGTCCAAGGATGTTAAGTTCATTCTTGTTGACGTCTCCGAGGAGGAGATTGAGCTCCGGAAGCCACATGTGGGGATTGTTGGGGACGCGAAGAGAGTAACTGAGCTGATCAACCGGGAGATCAAGGACAATCCATTCTGCCTGGCAAGGTCGCACCCATGGGTCGAAGCGATCACTAAGAAGGCCAATGACAATGTTCTTAAGATGGAGGCGCAGCTAGTGAAGGATGTTGTGCCATTCAATTTCATGACACCATTGCGGATCATCCGGGATGCGATCCTTGCCGAGGGGAGTCCTGCTCCAATAGTGGTCTCAGAAGGGGCAAATACCATGGATGTTGGCAGGGCTGTGCTTGTGCAGAATGAACCAAGGACAAGACTGGATGCAGGGACATGGGGGACGATGGGGGTTGGATTGGGGTACTGTATTGCGGCTGCAGCAGCTGAACCTGAACGACTCGTGGTTGCTGTGGAGGGCGATTCTGGATTTGGCTTCAGTGCAATGGAGGTTGAGACGTTGGTGAGGTACCAGCTGCCTGTTGTTGTAATCGTTTTCAACAACAACGGTGTCTACGGCGGGGACCGGAGAAGCCCTGACGAGATAACCGGACCCTACAAAGGTGACCCAGCCCCAACCTCATTTGTTCCGGCAGCAGGGTACCATAAGATGATGGAGGCTTTTGGAGGGAAAGGGTATCTTGTGGAGACACCAGACGAGCTCAAATCTGCCCTTTCAGAATCGTTCCGCGCCAGGAAACCGGCGGTGATTAATGTTATCATTGATCCTTACGCCGGCGCAGAGAGCGGTCGAATGCAGCACAAGAACTGAAGGCGCTTGCTTGGCTTTTGTACCATACCATAGCAGGATGCAGATGCGACTTGATACAAATAAGCAGCAACCGTCAATCAATCCTTTTGTTTCTTTTTTACGACCTCGCTTCGTTGTTCGTGATACAGACGTGGGGCGCTTTTAATTGGAAGTCCCATTTGAAGGCATGTGAATGTGTTATGATTATCTAAATGCCACGATGCAAACTTTAAAGGCATGTTGATGAGGATGTGTAGAAAACCTGTGCCCATATATGAGCCGGTATAATTATTTCTCAAAGTAATAAAGTCAGCGTTTTAAGGCCTGTTTGGAAGCACCACAATTTCTAAT
CDS Sequence
- >Zm00001eb336870_T001
ATGGCATCTGACTCCACGGCCGCCGTGACGGTGGACGGCAGCGCGCTTGCGGGGCGCGCGCTGGCCGCGGCGGGCACGCGGCACATGTTCGGGGTGGTGGGCATCCCCGTCACCTCCCTCGCGTCCCGTGCCGCCGCGGCCGGGGTCCGCTTCCTCGCCTTCCGCAACGAGCAGTCCGCGGGGTACGCCGCCGCCGCCTACGGCTTCCTCACGGGCTCCCCGGGCGCCCTACTCACCGTCTCCGGCCCAGGATGCGTCCACGGGCTCGCGGGCCTCTCCCACGCCACCGCCAACGCCTGGCCGCTCCTCATGATCTCCGGATCCTGCGACCAGGCTGACGCCGGCAGGGGCGACTTCCAGGAGCTCGACCAGATCGCCGCCACTAAGCCCTTCGTCAAGCTCGCCGTCAAGGCAACAACCATCGCCGACATCCCGCGCCTCGTCTTCCAGGCCCTCGCCGCCGCCGTGTCCGGCCGTCCCGGAGGGTGCTACCTCGATATCCCGTCCGATGTCCTCCACCAAACCCTCCCTGAATCCGAGGCCGCGGCTCTCATAGCAGCAGCAGCCGCCAATTCGGCCGCATCCGATCCTTCCCCGTCAAAGCACAAGACTCTTGACGAGGGAATCGCGAAAGCTGCGGACCTGCTCCGGTGTGCGGAGCGGCCTCTTGTTGTGATTGGGAAGGGTGCGGCGTATGCGCGCGCGGAGGAGGCGATTCGGAAGCTGGTGGACACCACGGGCATCCCCTTCCTCCCGACGCCGATGGGGAAAGGGGTCGTGCCTGACTCGCATCCACTCTCCGCCACGGCGGCACGCTCACTCGCCATCGGGCAGTGTGATGTGGCTCTGGTCATCGGTGCTAGGCTTAATTGGTTGCTTCACTTTGGCGAGCCACCCAAGTGGTCCAAGGATGTTAAGTTCATTCTTGTTGACGTCTCCGAGGAGGAGATTGAGCTCCGGAAGCCACATGTGGGGATTGTTGGGGACGCGAAGAGAGTAACTGAGCTGATCAACCGGGAGATCAAGGACAATCCATTCTGCCTGGCAAGGTCGCACCCATGGGTCGAAGCGATCACTAAGAAGGCCAATGACAATGTTCTTAAGATGGAGGCGCAGCTAGTGAAGGATGTTGTGCCATTCAATTTCATGACACCATTGCGGATCATCCGGGATGCGATCCTTGCCGAGGGGAGTCCTGCTCCAATAGTGGTCTCAGAAGGGGCAAATACCATGGATGTTGGCAGGGCTGTGCTTGTGCAGAATGAACCAAGGACAAGACTGGATGCAGGGACATGGGGGACGATGGGGGTTGGATTGGGGTACTGTATTGCGGCTGCAGCAGCTGAACCTGAACGACTCGTGGTTGCTGTGGAGGGCGATTCTGGATTTGGCTTCAGTGCAATGGAGGTTGAGACGTTGGTGAGGTACCAGCTGCCTGTTGTTGTAATCGTTTTCAACAACAACGGTGTCTACGGCGGGGACCGGAGAAGCCCTGACGAGATAACCGGACCCTACAAAGGTGACCCAGCCCCAACCTCATTTGTTCCGGCAGCAGGGTACCATAAGATGATGGAGGCTTTTGGAGGGAAAGGGTATCTTGTGGAGACACCAGACGAGCTCAAATCTGCCCTTTCAGAATCGTTCCGCGCCAGGAAACCGGCGGTGATTAATGTTATCATTGATCCTTACGCCGGCGCAGAGAGCGGTCGAATGCAGCACAAGAACTGA
Protein Sequence
- >Zm00001eb336870_P001
MASDSTAAVTVDGSALAGRALAAAGTRHMFGVVGIPVTSLASRAAAAGVRFLAFRNEQSAGYAAAAYGFLTGSPGALLTVSGPGCVHGLAGLSHATANAWPLLMISGSCDQADAGRGDFQELDQIAATKPFVKLAVKATTIADIPRLVFQALAAAVSGRPGGCYLDIPSDVLHQTLPESEAAALIAAAAANSAASDPSPSKHKTLDEGIAKAADLLRCAERPLVVIGKGAAYARAEEAIRKLVDTTGIPFLPTPMGKGVVPDSHPLSATAARSLAIGQCDVALVIGARLNWLLHFGEPPKWSKDVKFILVDVSEEEIELRKPHVGIVGDAKRVTELINREIKDNPFCLARSHPWVEAITKKANDNVLKMEAQLVKDVVPFNFMTPLRIIRDAILAEGSPAPIVVSEGANTMDVGRAVLVQNEPRTRLDAGTWGTMGVGLGYCIAAAAAEPERLVVAVEGDSGFGFSAMEVETLVRYQLPVVVIVFNNNGVYGGDRRSPDEITGPYKGDPAPTSFVPAAGYHKMMEAFGGKGYLVETPDELKSALSESFRARKPAVINVIIDPYAGAESGRMQHKN
Source: Genetic information comes from the article