Information report for ID1;ZmIDD5
Gene Details
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Functional Descriptions
- INDETERMINATE1 (ID1), a floral transition regulator, inhibits the transcription of ZmMIR399 genes by directly binding to their promoters, alleviating the repression of ZmPHO2 by miR399 and ultimately contributing to the maintenance of Pi homeostasis in maize.
- ID1 expression was independent of the external inorganic orthophosphate status, indicating that ID1 is an autonomous regulator of Pi homeostasis.
- The transcription factor INDETERMINATE1 (ID1) functions as an autonomous upstream regulator of phosphorus homeostasis by suppressing the transcription of ZmMIR399 genes.
- This study provides genetic resources for improving maize phosphorus use efficiency and breeding low phosphorus-tolerant maize varieties by editing the ID1-miR399-ZmPHO2 module.
- ID1-modified plants to fine-tune flowering time and phosphorus uptake in maize.
- ID1 requires extended growth for flowering; vegetatively totipotent with gt1 and factors for perennialism.
Functional Keywords
- transcription-factor , growth , floral , homeostasis , breeding , flowering-time , transcription-regulator , flowering , phosphorus , pi , pi-homeostasis , pi-uptake
Literature and News
- INDETERMINATE1 autonomously regulates phosphate homeostasis upstream of the miR399-ZmPHO2 signaling module in maize. DOI: 10.1093/plcell/koad089 ; PMID: 36943781
- Breeding maize of ideal plant architecture for high-density planting tolerance through modulating shade avoidance response and beyond. DOI: 10.1111/jipb.13603 ; PMID: 38131117
- The power of classic maize mutants: Driving forward our fundamental understanding of plants. DOI: 10.1093/plcell/koac081 ; PMID: 35274692
Gene Resources
- NCBI ID: LOC541693
- UniProt accessions: A0A317Y9F2
- EMBL: NCVQ01000001
- AlphaFoldDB: A0A317Y9F2
- InterPro: IPR013087 , IPR031140 , IPR036236 , IPR055185 , IPR055186 , IPR055187
- PANTHER: PTHR10593 , PTHR10593:SF136
- SUPFAM: SSF57667
- PROSITE: PS00028 , PS50157
- Gene3D: 3.30.160.60
Sequences
cDNA Sequence
- >Zm00001eb047750_T001
GCTTAGCCCGGCGGCCGGCCAGAACTGCAAGAGAGAAGACCAAGAAACAGAGAGAGACAAGCGCAGGGGACAGCAGCGGGTAGCTAGCTAGCTAGCGATCGACGACAGACGATGCAGATGATGATGCTCTCTGATCTCTCGTCTGACGACCACGAGGCCACTGGATCCAGCTCCTATGGCGGGGACATGGCCAGCTACGCCCTCAGCCCTCTCTTCCTCGCACCGGCGGCCTCGGCCACCGCGCCGCTGCCGCCACCTCCGCAGCCGCCGGCCGAGGAGCTCACCAACAAGCAGGCCGCGGGCGGCGGCAAGAGGAAGAGAAGCCAGCCGGGGAACCCAGACCCCGGCGCGGAGGTGATCGCGCTGTCGCCGCGCACGCTGGTGGCGACGAACCGGTTCGTGTGCGAGATCTGCAACAAGGGGTTCCAGCGGGACCAGAACCTGCAGCTGCACCGCCGGGGCCACAACCTCCCCTGGAAGCTCCGCCAGCGCAGCAGCCTCGTCGTCCCGTCGTCGTCGGCGGCGGCAGGCTCCGGCGGCAGGCAGCAGCAGCAGCAGGGCGAGGCCGCGCCGACGCCGCCGCGTAAGCGCGTCTACGTCTGCCCCGAGCCCACGTGCGTGCACCACGACCCGGCGAGAGCTCTGGGGGACTTGACTGGGATCAAGAAGCACTTCTCGCGGAAGCACGGGGAGAAGCGGTGGTGCTGCGAGCGCTGCGGGAAGCGCTACGCCGTGCAGTCGGACTGGAAGGCGCACGTCAAGGGGTGTGGCACGCGCGAGTACCGCTGCGACTGCGGCATCCTCTTCTCCAGGAAGGACAGCCTGCTCACGCACAGGGCCTTCTGCGATGCCCTAGCAGAGGAGAGCGCGAGGCTTCTTGCAGCAGCAGCAAACAACGGCAGCACTATCACCACGACCAGCAGCAGCAACAACAATGATCTTCTCAACGCCAGCAATAATATCACGCCATTATTCCTCCCGTTCGCCAGCTCTCCTCCTCCTGTCGTCGTAGCGGCGGCACAAAACCCTAATAACACCCTCTTCTTCCTGCACCAAGAGCTGTCCCCCTTCCTGCAACCGAGGGTGACGATGCAACAACAACCCTCGCCCTATCTTGACCTCCATATGCACGTCGACGCCAGCATCGTCACCACCACCGGTGGTCTCGCGGACGGCACGCCGGTCAGCTTTGGCCTCGCTCTGGACGGCTCGGTGGCCACCGTCGGCCACCGGCGCCTCACTAGGGACTTCCTCGGTGTCGATGGTGGCGGTCGTCAGGTCGAGGAGCTGCAGCTTCCACTGTGCGCCACAGCAGCCGCAGCAGGTGCCAGCCGCACCGCCAGCTGCGCCACCGACCTGACAAGGCAGTGCCTCGGCGGCCGGCTGCCGCCGGTCAACGAGACCTGGAGCCACAACTTCTAGGCCCGCTATATACTTCAAGCTGCATTGAGACTTTGAGAGACGAATGAACGGAACACCCAAACTGCATGCACTCTAGCTTGAAGAGCAACCAAAACTGGAGTAGCAAGTATGGTGCACTACTGTTGTTAATTTACCTTAATTTATTGATCTCTGTTAGTTCTATTTTCATTTAGGGCAATGCGGGCTAGCTAATTAATTCGATGTGCACAACTTTTGATGAATGGACCAGAAAGTTTATCTTGTTGCTTTTTTT
CDS Sequence
- >Zm00001eb047750_T001
ATGCAGATGATGATGCTCTCTGATCTCTCGTCTGACGACCACGAGGCCACTGGATCCAGCTCCTATGGCGGGGACATGGCCAGCTACGCCCTCAGCCCTCTCTTCCTCGCACCGGCGGCCTCGGCCACCGCGCCGCTGCCGCCACCTCCGCAGCCGCCGGCCGAGGAGCTCACCAACAAGCAGGCCGCGGGCGGCGGCAAGAGGAAGAGAAGCCAGCCGGGGAACCCAGACCCCGGCGCGGAGGTGATCGCGCTGTCGCCGCGCACGCTGGTGGCGACGAACCGGTTCGTGTGCGAGATCTGCAACAAGGGGTTCCAGCGGGACCAGAACCTGCAGCTGCACCGCCGGGGCCACAACCTCCCCTGGAAGCTCCGCCAGCGCAGCAGCCTCGTCGTCCCGTCGTCGTCGGCGGCGGCAGGCTCCGGCGGCAGGCAGCAGCAGCAGCAGGGCGAGGCCGCGCCGACGCCGCCGCGTAAGCGCGTCTACGTCTGCCCCGAGCCCACGTGCGTGCACCACGACCCGGCGAGAGCTCTGGGGGACTTGACTGGGATCAAGAAGCACTTCTCGCGGAAGCACGGGGAGAAGCGGTGGTGCTGCGAGCGCTGCGGGAAGCGCTACGCCGTGCAGTCGGACTGGAAGGCGCACGTCAAGGGGTGTGGCACGCGCGAGTACCGCTGCGACTGCGGCATCCTCTTCTCCAGGAAGGACAGCCTGCTCACGCACAGGGCCTTCTGCGATGCCCTAGCAGAGGAGAGCGCGAGGCTTCTTGCAGCAGCAGCAAACAACGGCAGCACTATCACCACGACCAGCAGCAGCAACAACAATGATCTTCTCAACGCCAGCAATAATATCACGCCATTATTCCTCCCGTTCGCCAGCTCTCCTCCTCCTGTCGTCGTAGCGGCGGCACAAAACCCTAATAACACCCTCTTCTTCCTGCACCAAGAGCTGTCCCCCTTCCTGCAACCGAGGGTGACGATGCAACAACAACCCTCGCCCTATCTTGACCTCCATATGCACGTCGACGCCAGCATCGTCACCACCACCGGTGGTCTCGCGGACGGCACGCCGGTCAGCTTTGGCCTCGCTCTGGACGGCTCGGTGGCCACCGTCGGCCACCGGCGCCTCACTAGGGACTTCCTCGGTGTCGATGGTGGCGGTCGTCAGGTCGAGGAGCTGCAGCTTCCACTGTGCGCCACAGCAGCCGCAGCAGGTGCCAGCCGCACCGCCAGCTGCGCCACCGACCTGACAAGGCAGTGCCTCGGCGGCCGGCTGCCGCCGGTCAACGAGACCTGGAGCCACAACTTCTAG
Protein Sequence
- >Zm00001eb047750_P001
MQMMMLSDLSSDDHEATGSSSYGGDMASYALSPLFLAPAASATAPLPPPPQPPAEELTNKQAAGGGKRKRSQPGNPDPGAEVIALSPRTLVATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLRQRSSLVVPSSSAAAGSGGRQQQQQGEAAPTPPRKRVYVCPEPTCVHHDPARALGDLTGIKKHFSRKHGEKRWCCERCGKRYAVQSDWKAHVKGCGTREYRCDCGILFSRKDSLLTHRAFCDALAEESARLLAAAANNGSTITTTSSSNNNDLLNASNNITPLFLPFASSPPPVVVAAAQNPNNTLFFLHQELSPFLQPRVTMQQQPSPYLDLHMHVDASIVTTTGGLADGTPVSFGLALDGSVATVGHRRLTRDFLGVDGGGRQVEELQLPLCATAAAAGASRTASCATDLTRQCLGGRLPPVNETWSHNF