Gene Details:
- Gene ID: Zm00001eb279350
- Gene Symbol: Emp601
- Gene Name: empty pericarp601
- Genome: Zm-B73-REFERENCE-NAM-5.0
- Species: Zea mays
Functional Descriptions:
- The pentatricopeptide repeat protein Emp601 functions in maize seed development by affecting RNA editing of mitochondrial transcript ccmC.
- Emp601 functions in RNA editing of mitochondrial ccmC transcripts and influences mitochondrial function and seed development.
- Emp601 acts in mitochondrial function and seed development by regulating RNA editing of mitochondrial ccmC transcripts.
- Here we report the identification of the maize empty pericarp 601 (Emp601) mutant and the map-based cloning of the Emp601 gene, which encodes an E2-type PPR protein that is targeted to mitochondria.
- A single-nucleotide deletion in the Emp601 mutant caused a frameshift and introduced a premature stop codon into the predicted Emp601.
Function-related keywords:
Literature:
- The pentatricopeptide repeat protein EMP601 functions in maize seed development by affecting RNA editing of mitochondrial transcript ccmC DOI: 10.1016/j.cj.2023.03.004 ; PMID:
Related News:
Gene Resources:
- NCBI ID: 103629919
- UniProt accessions: A0A1D6LVH5
Sequences:
cDNA Sequence
- >Zm00001eb279350_T001
GCCTCGACGCGAGCGGCCGCCGCCGCCTGCACCACGCCGTATTCGTGTGTCAAATACTCTTCTGACAAGTGACAACTGACAAGCAACCCGCCACCAGCGCCGTTGTCTACCTCGACTGCGGCAACCTTCTCCCGCTGCCTTCCCGCGTGATCTCAACTTGGGCAGGATGCGATATACCAGTTGCTGTTGGTATTAAACAGCACGCACCAACAATGAGCCTTGCCAATGCCCCGAAATCCGCCGCCGCGCTCTATTCCTCCCTGCTCCAGAGCTCTATGGGCGCTAACGCGTTTCGGCAAGGCAAATCCGTGCACCACCGGGCCATCATCACGTCTTCCGCCTCACCTCCGGACCTCCACCTGAATACCAAGCTCGTCATTTTCTACTCTCACTTCGGCGACGTTGCGGCCGCACGCAGGGTGTTCGACGGGATGCCGCACAGGAGTGTCGTGTCCTGGACTGCCATGGTCTCTGGGTACGCCAAGAACAGCCGTCCCCAGGAGGCGCTGGACCTGTTTGCGTTCATGCTCCGGTCCGGCGCCAGGCCGAACCAGTTCACGTTCGGGAGCGCGGTGAGGGCATGCACGGGCGCCCGCTGCGCGAGGAGCGGGGAGCAAATTCACGCGTGTGCGGCTAAAGGGAGGTTCGCAGGCGACATGTTTGTGCAGAGCGCGCTCATGGACATGCATCTCAGGTGCGGGTCAGTAGGGGACGCGAGGCGACTGTTTGCGGAGATGGAGAGGAAAGACTTGGTGTCCTGGAATTCCCTGATGAGGGGGTTTGTGGAGAGGGAGCATTGTAATGATGCGCTTGGATTGTTTGATTCAATGCTGAGAGATGGGATGCTACCTGATCATTTCACATTTGGAAGTGCTCTAAAGGCATGTGGAGCAATCAGTGTGCTTTTCAATGTGGAGCTAATTCACGCTTGCATCATCAAGCTTGGTTATTGGGACGAAAACGTCGCTATTGCATCACTTATTGATTCTTATGCAAAATGTCGGAGCTTAAGCAGTGCGAGGGTGATATATGATTCCATGTGTGAACCAGACCTCGTGTCATCTACAGCATTGATCAGTGGGTACTCCATGGATAGGAACTATAGTGATGATGCAATGAAGCTTTTCTGTAAGATTCATCGAAAGGGTTTAAGAATTGATGCTATTCTGTTAAGCTCCTTGCTTGGTGTTTGTGCTAATGTAGCATCAATAAAATTTGGGACACAAATTCATGCTTACATGCACAAGAAGCAACCTATGGGTGATTTGGCATTGGACAACGCTCTTGTTGACATGTATGCAAAGTCAGGAGAATTTTTGGATTCCAGACGCGCTTTTGATGAAATGCCCAACAGAAATGTGATTTCGTGGACTTCACTTATTACTTCCTGTGCACAACATGGTTTTGGAGAAGATGCTGTGACCCTTTTTGCTAGGATGGAGGAGGATGGTGTGAAGCCAAATGATGTGACATTCCTTTCTCTTCTATCAGCATGCAGCCATTCTGGTATGATGAACAAAGGGATGGAATATTTCACTTCTATGATGAGCAAGTATGGTATTGATCCAAGATTTAAGCATTACAGCTCTGCTGTTGACCTTCTTGCTCGTGGTGGTCAGTTAGAAGATGCATGGATGCTTGTTCAAAATACGAATACTGAGTGCAAGTCATCAATGTATGGTACAATGCTTGGAGCTTGCAAGGTACATGGCAACATGCCTCTTGGAGAAACTGCGGCTAAGAATCTTTTGAGTATAGATCCTGAGAGTTCTGTGAACTATGCTGTCCTTGCAAACATGTATGCAGAATCCCATTTATGGGAGGATGCTCAGAGAACAAGAAAATTATTGGTGGAGACATCCAAAGGAAAAGAAGCTGGTTTCAGTGTCATATCAAGATAGGTAACGGTCAACAAAGATATTTTCATCTGCAGAAATGAAAGGGAATGGCTATTTGCCTCTAAAAATGATCAAGATTAATCTGAAACCCTGATCTTCTTTTGACTATGGTCCAAGATCCCAGATGGACTTTAGATCCAACGTACATGACAGCTGTTGAATTGAAACACTGAGTCACTGACCTTGTGAAGACTTAAGAGCTTCGACCGATCTGTATGCAGAGCCACACGATGACTGCAACTGGTGTGCAGTGTTCTCTTTTTCTGCTTACTCCCTGTTTTCTGGGACTTCATACACTGTAAATTGTTGTACCTTTTCACCTACTTAATGCAAAGGCAGAGCA
CDS Sequence
- >Zm00001eb279350_T001
ATGAGCCTTGCCAATGCCCCGAAATCCGCCGCCGCGCTCTATTCCTCCCTGCTCCAGAGCTCTATGGGCGCTAACGCGTTTCGGCAAGGCAAATCCGTGCACCACCGGGCCATCATCACGTCTTCCGCCTCACCTCCGGACCTCCACCTGAATACCAAGCTCGTCATTTTCTACTCTCACTTCGGCGACGTTGCGGCCGCACGCAGGGTGTTCGACGGGATGCCGCACAGGAGTGTCGTGTCCTGGACTGCCATGGTCTCTGGGTACGCCAAGAACAGCCGTCCCCAGGAGGCGCTGGACCTGTTTGCGTTCATGCTCCGGTCCGGCGCCAGGCCGAACCAGTTCACGTTCGGGAGCGCGGTGAGGGCATGCACGGGCGCCCGCTGCGCGAGGAGCGGGGAGCAAATTCACGCGTGTGCGGCTAAAGGGAGGTTCGCAGGCGACATGTTTGTGCAGAGCGCGCTCATGGACATGCATCTCAGGTGCGGGTCAGTAGGGGACGCGAGGCGACTGTTTGCGGAGATGGAGAGGAAAGACTTGGTGTCCTGGAATTCCCTGATGAGGGGGTTTGTGGAGAGGGAGCATTGTAATGATGCGCTTGGATTGTTTGATTCAATGCTGAGAGATGGGATGCTACCTGATCATTTCACATTTGGAAGTGCTCTAAAGGCATGTGGAGCAATCAGTGTGCTTTTCAATGTGGAGCTAATTCACGCTTGCATCATCAAGCTTGGTTATTGGGACGAAAACGTCGCTATTGCATCACTTATTGATTCTTATGCAAAATGTCGGAGCTTAAGCAGTGCGAGGGTGATATATGATTCCATGTGTGAACCAGACCTCGTGTCATCTACAGCATTGATCAGTGGGTACTCCATGGATAGGAACTATAGTGATGATGCAATGAAGCTTTTCTGTAAGATTCATCGAAAGGGTTTAAGAATTGATGCTATTCTGTTAAGCTCCTTGCTTGGTGTTTGTGCTAATGTAGCATCAATAAAATTTGGGACACAAATTCATGCTTACATGCACAAGAAGCAACCTATGGGTGATTTGGCATTGGACAACGCTCTTGTTGACATGTATGCAAAGTCAGGAGAATTTTTGGATTCCAGACGCGCTTTTGATGAAATGCCCAACAGAAATGTGATTTCGTGGACTTCACTTATTACTTCCTGTGCACAACATGGTTTTGGAGAAGATGCTGTGACCCTTTTTGCTAGGATGGAGGAGGATGGTGTGAAGCCAAATGATGTGACATTCCTTTCTCTTCTATCAGCATGCAGCCATTCTGGTATGATGAACAAAGGGATGGAATATTTCACTTCTATGATGAGCAAGTATGGTATTGATCCAAGATTTAAGCATTACAGCTCTGCTGTTGACCTTCTTGCTCGTGGTGGTCAGTTAGAAGATGCATGGATGCTTGTTCAAAATACGAATACTGAGTGCAAGTCATCAATGTATGGTACAATGCTTGGAGCTTGCAAGGTACATGGCAACATGCCTCTTGGAGAAACTGCGGCTAAGAATCTTTTGAGTATAGATCCTGAGAGTTCTGTGAACTATGCTGTCCTTGCAAACATGTATGCAGAATCCCATTTATGGGAGGATGCTCAGAGAACAAGAAAATTATTGGTGGAGACATCCAAAGGAAAAGAAGCTGGTTTCAGTGTCATATCAAGATAG
Protein Sequence
- >Zm00001eb279350_P001
MSLANAPKSAAALYSSLLQSSMGANAFRQGKSVHHRAIITSSASPPDLHLNTKLVIFYSHFGDVAAARRVFDGMPHRSVVSWTAMVSGYAKNSRPQEALDLFAFMLRSGARPNQFTFGSAVRACTGARCARSGEQIHACAAKGRFAGDMFVQSALMDMHLRCGSVGDARRLFAEMERKDLVSWNSLMRGFVEREHCNDALGLFDSMLRDGMLPDHFTFGSALKACGAISVLFNVELIHACIIKLGYWDENVAIASLIDSYAKCRSLSSARVIYDSMCEPDLVSSTALISGYSMDRNYSDDAMKLFCKIHRKGLRIDAILLSSLLGVCANVASIKFGTQIHAYMHKKQPMGDLALDNALVDMYAKSGEFLDSRRAFDEMPNRNVISWTSLITSCAQHGFGEDAVTLFARMEEDGVKPNDVTFLSLLSACSHSGMMNKGMEYFTSMMSKYGIDPRFKHYSSAVDLLARGGQLEDAWMLVQNTNTECKSSMYGTMLGACKVHGNMPLGETAAKNLLSIDPESSVNYAVLANMYAESHLWEDAQRTRKLLVETSKGKEAGFSVISR
Source: Genetic information comes from the article