Gene Details:

Functional Descriptions:

  • The pentatricopeptide repeat protein Emp601 functions in maize seed development by affecting RNA editing of mitochondrial transcript ccmC.
  • Emp601 functions in RNA editing of mitochondrial ccmC transcripts and influences mitochondrial function and seed development.
  • Emp601 acts in mitochondrial function and seed development by regulating RNA editing of mitochondrial ccmC transcripts.
  • Here we report the identification of the maize empty pericarp 601 (Emp601) mutant and the map-based cloning of the Emp601 gene, which encodes an E2-type PPR protein that is targeted to mitochondria.
  • A single-nucleotide deletion in the Emp601 mutant caused a frameshift and introduced a premature stop codon into the predicted Emp601.

Literature:

Gene Resources:

Sequences:

cDNA Sequence
  • >Zm00001eb279350_T001
    GCCTCGACGCGAGCGGCCGCCGCCGCCTGCACCACGCCGTATTCGTGTGTCAAATACTCTTCTGACAAGTGACAACTGACAAGCAACCCGCCACCAGCGCCGTTGTCTACCTCGACTGCGGCAACCTTCTCCCGCTGCCTTCCCGCGTGATCTCAACTTGGGCAGGATGCGATATACCAGTTGCTGTTGGTATTAAACAGCACGCACCAACAATGAGCCTTGCCAATGCCCCGAAATCCGCCGCCGCGCTCTATTCCTCCCTGCTCCAGAGCTCTATGGGCGCTAACGCGTTTCGGCAAGGCAAATCCGTGCACCACCGGGCCATCATCACGTCTTCCGCCTCACCTCCGGACCTCCACCTGAATACCAAGCTCGTCATTTTCTACTCTCACTTCGGCGACGTTGCGGCCGCACGCAGGGTGTTCGACGGGATGCCGCACAGGAGTGTCGTGTCCTGGACTGCCATGGTCTCTGGGTACGCCAAGAACAGCCGTCCCCAGGAGGCGCTGGACCTGTTTGCGTTCATGCTCCGGTCCGGCGCCAGGCCGAACCAGTTCACGTTCGGGAGCGCGGTGAGGGCATGCACGGGCGCCCGCTGCGCGAGGAGCGGGGAGCAAATTCACGCGTGTGCGGCTAAAGGGAGGTTCGCAGGCGACATGTTTGTGCAGAGCGCGCTCATGGACATGCATCTCAGGTGCGGGTCAGTAGGGGACGCGAGGCGACTGTTTGCGGAGATGGAGAGGAAAGACTTGGTGTCCTGGAATTCCCTGATGAGGGGGTTTGTGGAGAGGGAGCATTGTAATGATGCGCTTGGATTGTTTGATTCAATGCTGAGAGATGGGATGCTACCTGATCATTTCACATTTGGAAGTGCTCTAAAGGCATGTGGAGCAATCAGTGTGCTTTTCAATGTGGAGCTAATTCACGCTTGCATCATCAAGCTTGGTTATTGGGACGAAAACGTCGCTATTGCATCACTTATTGATTCTTATGCAAAATGTCGGAGCTTAAGCAGTGCGAGGGTGATATATGATTCCATGTGTGAACCAGACCTCGTGTCATCTACAGCATTGATCAGTGGGTACTCCATGGATAGGAACTATAGTGATGATGCAATGAAGCTTTTCTGTAAGATTCATCGAAAGGGTTTAAGAATTGATGCTATTCTGTTAAGCTCCTTGCTTGGTGTTTGTGCTAATGTAGCATCAATAAAATTTGGGACACAAATTCATGCTTACATGCACAAGAAGCAACCTATGGGTGATTTGGCATTGGACAACGCTCTTGTTGACATGTATGCAAAGTCAGGAGAATTTTTGGATTCCAGACGCGCTTTTGATGAAATGCCCAACAGAAATGTGATTTCGTGGACTTCACTTATTACTTCCTGTGCACAACATGGTTTTGGAGAAGATGCTGTGACCCTTTTTGCTAGGATGGAGGAGGATGGTGTGAAGCCAAATGATGTGACATTCCTTTCTCTTCTATCAGCATGCAGCCATTCTGGTATGATGAACAAAGGGATGGAATATTTCACTTCTATGATGAGCAAGTATGGTATTGATCCAAGATTTAAGCATTACAGCTCTGCTGTTGACCTTCTTGCTCGTGGTGGTCAGTTAGAAGATGCATGGATGCTTGTTCAAAATACGAATACTGAGTGCAAGTCATCAATGTATGGTACAATGCTTGGAGCTTGCAAGGTACATGGCAACATGCCTCTTGGAGAAACTGCGGCTAAGAATCTTTTGAGTATAGATCCTGAGAGTTCTGTGAACTATGCTGTCCTTGCAAACATGTATGCAGAATCCCATTTATGGGAGGATGCTCAGAGAACAAGAAAATTATTGGTGGAGACATCCAAAGGAAAAGAAGCTGGTTTCAGTGTCATATCAAGATAGGTAACGGTCAACAAAGATATTTTCATCTGCAGAAATGAAAGGGAATGGCTATTTGCCTCTAAAAATGATCAAGATTAATCTGAAACCCTGATCTTCTTTTGACTATGGTCCAAGATCCCAGATGGACTTTAGATCCAACGTACATGACAGCTGTTGAATTGAAACACTGAGTCACTGACCTTGTGAAGACTTAAGAGCTTCGACCGATCTGTATGCAGAGCCACACGATGACTGCAACTGGTGTGCAGTGTTCTCTTTTTCTGCTTACTCCCTGTTTTCTGGGACTTCATACACTGTAAATTGTTGTACCTTTTCACCTACTTAATGCAAAGGCAGAGCA
CDS Sequence
  • >Zm00001eb279350_T001
    ATGAGCCTTGCCAATGCCCCGAAATCCGCCGCCGCGCTCTATTCCTCCCTGCTCCAGAGCTCTATGGGCGCTAACGCGTTTCGGCAAGGCAAATCCGTGCACCACCGGGCCATCATCACGTCTTCCGCCTCACCTCCGGACCTCCACCTGAATACCAAGCTCGTCATTTTCTACTCTCACTTCGGCGACGTTGCGGCCGCACGCAGGGTGTTCGACGGGATGCCGCACAGGAGTGTCGTGTCCTGGACTGCCATGGTCTCTGGGTACGCCAAGAACAGCCGTCCCCAGGAGGCGCTGGACCTGTTTGCGTTCATGCTCCGGTCCGGCGCCAGGCCGAACCAGTTCACGTTCGGGAGCGCGGTGAGGGCATGCACGGGCGCCCGCTGCGCGAGGAGCGGGGAGCAAATTCACGCGTGTGCGGCTAAAGGGAGGTTCGCAGGCGACATGTTTGTGCAGAGCGCGCTCATGGACATGCATCTCAGGTGCGGGTCAGTAGGGGACGCGAGGCGACTGTTTGCGGAGATGGAGAGGAAAGACTTGGTGTCCTGGAATTCCCTGATGAGGGGGTTTGTGGAGAGGGAGCATTGTAATGATGCGCTTGGATTGTTTGATTCAATGCTGAGAGATGGGATGCTACCTGATCATTTCACATTTGGAAGTGCTCTAAAGGCATGTGGAGCAATCAGTGTGCTTTTCAATGTGGAGCTAATTCACGCTTGCATCATCAAGCTTGGTTATTGGGACGAAAACGTCGCTATTGCATCACTTATTGATTCTTATGCAAAATGTCGGAGCTTAAGCAGTGCGAGGGTGATATATGATTCCATGTGTGAACCAGACCTCGTGTCATCTACAGCATTGATCAGTGGGTACTCCATGGATAGGAACTATAGTGATGATGCAATGAAGCTTTTCTGTAAGATTCATCGAAAGGGTTTAAGAATTGATGCTATTCTGTTAAGCTCCTTGCTTGGTGTTTGTGCTAATGTAGCATCAATAAAATTTGGGACACAAATTCATGCTTACATGCACAAGAAGCAACCTATGGGTGATTTGGCATTGGACAACGCTCTTGTTGACATGTATGCAAAGTCAGGAGAATTTTTGGATTCCAGACGCGCTTTTGATGAAATGCCCAACAGAAATGTGATTTCGTGGACTTCACTTATTACTTCCTGTGCACAACATGGTTTTGGAGAAGATGCTGTGACCCTTTTTGCTAGGATGGAGGAGGATGGTGTGAAGCCAAATGATGTGACATTCCTTTCTCTTCTATCAGCATGCAGCCATTCTGGTATGATGAACAAAGGGATGGAATATTTCACTTCTATGATGAGCAAGTATGGTATTGATCCAAGATTTAAGCATTACAGCTCTGCTGTTGACCTTCTTGCTCGTGGTGGTCAGTTAGAAGATGCATGGATGCTTGTTCAAAATACGAATACTGAGTGCAAGTCATCAATGTATGGTACAATGCTTGGAGCTTGCAAGGTACATGGCAACATGCCTCTTGGAGAAACTGCGGCTAAGAATCTTTTGAGTATAGATCCTGAGAGTTCTGTGAACTATGCTGTCCTTGCAAACATGTATGCAGAATCCCATTTATGGGAGGATGCTCAGAGAACAAGAAAATTATTGGTGGAGACATCCAAAGGAAAAGAAGCTGGTTTCAGTGTCATATCAAGATAG
Protein Sequence
  • >Zm00001eb279350_P001
    MSLANAPKSAAALYSSLLQSSMGANAFRQGKSVHHRAIITSSASPPDLHLNTKLVIFYSHFGDVAAARRVFDGMPHRSVVSWTAMVSGYAKNSRPQEALDLFAFMLRSGARPNQFTFGSAVRACTGARCARSGEQIHACAAKGRFAGDMFVQSALMDMHLRCGSVGDARRLFAEMERKDLVSWNSLMRGFVEREHCNDALGLFDSMLRDGMLPDHFTFGSALKACGAISVLFNVELIHACIIKLGYWDENVAIASLIDSYAKCRSLSSARVIYDSMCEPDLVSSTALISGYSMDRNYSDDAMKLFCKIHRKGLRIDAILLSSLLGVCANVASIKFGTQIHAYMHKKQPMGDLALDNALVDMYAKSGEFLDSRRAFDEMPNRNVISWTSLITSCAQHGFGEDAVTLFARMEEDGVKPNDVTFLSLLSACSHSGMMNKGMEYFTSMMSKYGIDPRFKHYSSAVDLLARGGQLEDAWMLVQNTNTECKSSMYGTMLGACKVHGNMPLGETAAKNLLSIDPESSVNYAVLANMYAESHLWEDAQRTRKLLVETSKGKEAGFSVISR

Source: Genetic information comes from the article