Information report for Emp601
Gene Details
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Functional Descriptions
- The pentatricopeptide repeat protein Emp601 functions in maize seed development by affecting RNA editing of mitochondrial transcript ccmC.
- Emp601 functions in RNA editing of mitochondrial ccmC transcripts and influences mitochondrial function and seed development.
- Emp601 acts in mitochondrial function and seed development by regulating RNA editing of mitochondrial ccmC transcripts.
- Here we report the identification of the maize empty pericarp 601 (Emp601) mutant and the map-based cloning of the Emp601 gene, which encodes an E2-type PPR protein that is targeted to mitochondria.
- A single-nucleotide deletion in the Emp601 mutant caused a frameshift and introduced a premature stop codon into the predicted Emp601.
Functional Keywords
Literature and News
Gene Resources
- NCBI ID: 103629919
- UniProt accessions: A0A1D6LVH5
- EMBL: CM000782
- EnsemblPlants: Zm00001eb279350_T001
- Gramene: Zm00001eb279350_T001
- KEGG: zma:103629919
- OMA: ESYDLIC
- ExpressionAtlas: Zm00001eb279350
- InterPro: IPR002885 , IPR011990 , IPR046848 , IPR046960
- PANTHER: PTHR47926 , PTHR47926:SF417
- PROSITE: PS51375
- Gene3D: 1.25.40.10
- OrthoDB: A0A1D6LVH5
- SMR: A0A1D6LVH5
Sequences
cDNA Sequence
- >Zm00001eb279350_T001
GCCTCGACGCGAGCGGCCGCCGCCGCCTGCACCACGCCGTATTCGTGTGTCAAATACTCTTCTGACAAGTGACAACTGACAAGCAACCCGCCACCAGCGCCGTTGTCTACCTCGACTGCGGCAACCTTCTCCCGCTGCCTTCCCGCGTGATCTCAACTTGGGCAGGATGCGATATACCAGTTGCTGTTGGTATTAAACAGCACGCACCAACAATGAGCCTTGCCAATGCCCCGAAATCCGCCGCCGCGCTCTATTCCTCCCTGCTCCAGAGCTCTATGGGCGCTAACGCGTTTCGGCAAGGCAAATCCGTGCACCACCGGGCCATCATCACGTCTTCCGCCTCACCTCCGGACCTCCACCTGAATACCAAGCTCGTCATTTTCTACTCTCACTTCGGCGACGTTGCGGCCGCACGCAGGGTGTTCGACGGGATGCCGCACAGGAGTGTCGTGTCCTGGACTGCCATGGTCTCTGGGTACGCCAAGAACAGCCGTCCCCAGGAGGCGCTGGACCTGTTTGCGTTCATGCTCCGGTCCGGCGCCAGGCCGAACCAGTTCACGTTCGGGAGCGCGGTGAGGGCATGCACGGGCGCCCGCTGCGCGAGGAGCGGGGAGCAAATTCACGCGTGTGCGGCTAAAGGGAGGTTCGCAGGCGACATGTTTGTGCAGAGCGCGCTCATGGACATGCATCTCAGGTGCGGGTCAGTAGGGGACGCGAGGCGACTGTTTGCGGAGATGGAGAGGAAAGACTTGGTGTCCTGGAATTCCCTGATGAGGGGGTTTGTGGAGAGGGAGCATTGTAATGATGCGCTTGGATTGTTTGATTCAATGCTGAGAGATGGGATGCTACCTGATCATTTCACATTTGGAAGTGCTCTAAAGGCATGTGGAGCAATCAGTGTGCTTTTCAATGTGGAGCTAATTCACGCTTGCATCATCAAGCTTGGTTATTGGGACGAAAACGTCGCTATTGCATCACTTATTGATTCTTATGCAAAATGTCGGAGCTTAAGCAGTGCGAGGGTGATATATGATTCCATGTGTGAACCAGACCTCGTGTCATCTACAGCATTGATCAGTGGGTACTCCATGGATAGGAACTATAGTGATGATGCAATGAAGCTTTTCTGTAAGATTCATCGAAAGGGTTTAAGAATTGATGCTATTCTGTTAAGCTCCTTGCTTGGTGTTTGTGCTAATGTAGCATCAATAAAATTTGGGACACAAATTCATGCTTACATGCACAAGAAGCAACCTATGGGTGATTTGGCATTGGACAACGCTCTTGTTGACATGTATGCAAAGTCAGGAGAATTTTTGGATTCCAGACGCGCTTTTGATGAAATGCCCAACAGAAATGTGATTTCGTGGACTTCACTTATTACTTCCTGTGCACAACATGGTTTTGGAGAAGATGCTGTGACCCTTTTTGCTAGGATGGAGGAGGATGGTGTGAAGCCAAATGATGTGACATTCCTTTCTCTTCTATCAGCATGCAGCCATTCTGGTATGATGAACAAAGGGATGGAATATTTCACTTCTATGATGAGCAAGTATGGTATTGATCCAAGATTTAAGCATTACAGCTCTGCTGTTGACCTTCTTGCTCGTGGTGGTCAGTTAGAAGATGCATGGATGCTTGTTCAAAATACGAATACTGAGTGCAAGTCATCAATGTATGGTACAATGCTTGGAGCTTGCAAGGTACATGGCAACATGCCTCTTGGAGAAACTGCGGCTAAGAATCTTTTGAGTATAGATCCTGAGAGTTCTGTGAACTATGCTGTCCTTGCAAACATGTATGCAGAATCCCATTTATGGGAGGATGCTCAGAGAACAAGAAAATTATTGGTGGAGACATCCAAAGGAAAAGAAGCTGGTTTCAGTGTCATATCAAGATAGGTAACGGTCAACAAAGATATTTTCATCTGCAGAAATGAAAGGGAATGGCTATTTGCCTCTAAAAATGATCAAGATTAATCTGAAACCCTGATCTTCTTTTGACTATGGTCCAAGATCCCAGATGGACTTTAGATCCAACGTACATGACAGCTGTTGAATTGAAACACTGAGTCACTGACCTTGTGAAGACTTAAGAGCTTCGACCGATCTGTATGCAGAGCCACACGATGACTGCAACTGGTGTGCAGTGTTCTCTTTTTCTGCTTACTCCCTGTTTTCTGGGACTTCATACACTGTAAATTGTTGTACCTTTTCACCTACTTAATGCAAAGGCAGAGCA
CDS Sequence
- >Zm00001eb279350_T001
ATGAGCCTTGCCAATGCCCCGAAATCCGCCGCCGCGCTCTATTCCTCCCTGCTCCAGAGCTCTATGGGCGCTAACGCGTTTCGGCAAGGCAAATCCGTGCACCACCGGGCCATCATCACGTCTTCCGCCTCACCTCCGGACCTCCACCTGAATACCAAGCTCGTCATTTTCTACTCTCACTTCGGCGACGTTGCGGCCGCACGCAGGGTGTTCGACGGGATGCCGCACAGGAGTGTCGTGTCCTGGACTGCCATGGTCTCTGGGTACGCCAAGAACAGCCGTCCCCAGGAGGCGCTGGACCTGTTTGCGTTCATGCTCCGGTCCGGCGCCAGGCCGAACCAGTTCACGTTCGGGAGCGCGGTGAGGGCATGCACGGGCGCCCGCTGCGCGAGGAGCGGGGAGCAAATTCACGCGTGTGCGGCTAAAGGGAGGTTCGCAGGCGACATGTTTGTGCAGAGCGCGCTCATGGACATGCATCTCAGGTGCGGGTCAGTAGGGGACGCGAGGCGACTGTTTGCGGAGATGGAGAGGAAAGACTTGGTGTCCTGGAATTCCCTGATGAGGGGGTTTGTGGAGAGGGAGCATTGTAATGATGCGCTTGGATTGTTTGATTCAATGCTGAGAGATGGGATGCTACCTGATCATTTCACATTTGGAAGTGCTCTAAAGGCATGTGGAGCAATCAGTGTGCTTTTCAATGTGGAGCTAATTCACGCTTGCATCATCAAGCTTGGTTATTGGGACGAAAACGTCGCTATTGCATCACTTATTGATTCTTATGCAAAATGTCGGAGCTTAAGCAGTGCGAGGGTGATATATGATTCCATGTGTGAACCAGACCTCGTGTCATCTACAGCATTGATCAGTGGGTACTCCATGGATAGGAACTATAGTGATGATGCAATGAAGCTTTTCTGTAAGATTCATCGAAAGGGTTTAAGAATTGATGCTATTCTGTTAAGCTCCTTGCTTGGTGTTTGTGCTAATGTAGCATCAATAAAATTTGGGACACAAATTCATGCTTACATGCACAAGAAGCAACCTATGGGTGATTTGGCATTGGACAACGCTCTTGTTGACATGTATGCAAAGTCAGGAGAATTTTTGGATTCCAGACGCGCTTTTGATGAAATGCCCAACAGAAATGTGATTTCGTGGACTTCACTTATTACTTCCTGTGCACAACATGGTTTTGGAGAAGATGCTGTGACCCTTTTTGCTAGGATGGAGGAGGATGGTGTGAAGCCAAATGATGTGACATTCCTTTCTCTTCTATCAGCATGCAGCCATTCTGGTATGATGAACAAAGGGATGGAATATTTCACTTCTATGATGAGCAAGTATGGTATTGATCCAAGATTTAAGCATTACAGCTCTGCTGTTGACCTTCTTGCTCGTGGTGGTCAGTTAGAAGATGCATGGATGCTTGTTCAAAATACGAATACTGAGTGCAAGTCATCAATGTATGGTACAATGCTTGGAGCTTGCAAGGTACATGGCAACATGCCTCTTGGAGAAACTGCGGCTAAGAATCTTTTGAGTATAGATCCTGAGAGTTCTGTGAACTATGCTGTCCTTGCAAACATGTATGCAGAATCCCATTTATGGGAGGATGCTCAGAGAACAAGAAAATTATTGGTGGAGACATCCAAAGGAAAAGAAGCTGGTTTCAGTGTCATATCAAGATAG
Protein Sequence
- >Zm00001eb279350_P001
MSLANAPKSAAALYSSLLQSSMGANAFRQGKSVHHRAIITSSASPPDLHLNTKLVIFYSHFGDVAAARRVFDGMPHRSVVSWTAMVSGYAKNSRPQEALDLFAFMLRSGARPNQFTFGSAVRACTGARCARSGEQIHACAAKGRFAGDMFVQSALMDMHLRCGSVGDARRLFAEMERKDLVSWNSLMRGFVEREHCNDALGLFDSMLRDGMLPDHFTFGSALKACGAISVLFNVELIHACIIKLGYWDENVAIASLIDSYAKCRSLSSARVIYDSMCEPDLVSSTALISGYSMDRNYSDDAMKLFCKIHRKGLRIDAILLSSLLGVCANVASIKFGTQIHAYMHKKQPMGDLALDNALVDMYAKSGEFLDSRRAFDEMPNRNVISWTSLITSCAQHGFGEDAVTLFARMEEDGVKPNDVTFLSLLSACSHSGMMNKGMEYFTSMMSKYGIDPRFKHYSSAVDLLARGGQLEDAWMLVQNTNTECKSSMYGTMLGACKVHGNMPLGETAAKNLLSIDPESSVNYAVLANMYAESHLWEDAQRTRKLLVETSKGKEAGFSVISR