Gene Details:
- Gene ID: Zm00001eb068720
- Gene Symbol: Emp12 ZmPPR087
- Gene Name: empty pericarp12
- Genome: Zm-B73-REFERENCE-NAM-5.0
- Species: Zea mays
Functional Descriptions:
- The mitochondrial pentatricopeptide repeat protein Emp12 is involved in the splicing of three nad2 introns and seed development in maize
- The mitochondrial pentatricopeptide repeat protein Emp12 is involved in the splicing of three nad2 introns and seed development in maize.
- Emp12 is targeted to mitochondria. Loss-of-function mutation in Emp12 severely arrests embryo and endosperm development, causing embryo lethality.
- Emp12 is required for the trans-splicing of nad2 intron 2 and cis-splicing of nad2 introns 1 and 4, and is important to complex I biogenesis, and embryogenesis and endosperm development in maize.
- Emp12 plays an essential role in nad2 intron splicing, mitochondria functions, and embryo and endosperm development in maize.
Function-related keywords:
- development , seed , mitochondria , embryo , endosperm , seed-development , endosperm-development , embryo-development
Literature:
- The mitochondrial pentatricopeptide repeat protein EMP12 is involved in the splicing of three nad2 introns and seed development in maize. DOI: 10.1093/jxb/ery432 ; PMID: 30535370
Related News:
Gene Resources:
- NCBI ID: LOC100274078
- UniProt accessions: B4FYY0
Sequences:
cDNA Sequence
- >Zm00001eb068720_T001
GTTTTTCCCGTGATTTCTAAAACCTTATTAATTCTTTACACACAAATTTTAATAAAATTGATAAAAACCACTTTGATAATCACTTCTAACAAGGACATTGAGATAATTTAAATGGTTGGGTGTTGAAGGAGGCAGTCTGTTCGGTTTTAGAGCTAGAGGAAAAAATTAGACTTTCAAAAAGATTTTGAAACCTAGATTACGATAGTTTAGTACTTCAGTTTATGAAGTCAAAAAAGTTTTTTTCCCCAATTATCACCAGCAGCCGGTTTGGGCTTGGGCCGGCCAGAGGCAGGCCGAGTCGCAAGCGCCGTTGCCATCTCTAACACGCGGCACTGTAGGAATCGGCTACCTCCGGCTGCTCTGCTTTGTGAGATGCTCTTCCTCGTCCGGCGGCACCGCCGCCTCGCTCTCCCCTTCTCCAGTCTGCACGCACCCGCGCCCGCGCCCGCTCCCACACTGCCCTCCTCTCTCGACGCCTCGGCGGTGCTCAAGACGCTGTCCCTCTACGCCAACGATTGGCGCCGGGCGCTCGACTTCTTCCACTGGTCCGCCTCCCCCGCCGGCGCCAACTTGCCCCCGACCGCCGCCACCCTCGCCCGAGCGGTCGACATACTCGGCAAACACTTCGAGTTCCCGCTCGCCACCTCCCTCCTCCTTTCCCACCACGATCCTGGGGACCCCACCTTCCTCCGCCCCGCGCTCCGCGCCCTCCTCAACCGCCTCGCCGCCGCCAACCTCATCGACGACGCCCTCCACGCGTTCGAATCCACCGCTGCCTCCATCGGACTCTGCGATGAGGTCTCCTTCCACATCCTCGTCGACGCGCTCTGCGACCACCGCCGCGTCGACGAGGCCGACCACCTATGCTTCGGCAAGGACCCGCCGCCGTTCCCACCGGGCACGAAGACCCACAACCTGCTCCTCCGTGGGTGGGCTAAGGCCCACGCCTGGGCGCGTCTCCGCCAGCTGTGGTTCGACATGGACCGCCGCGGCGTTGCCAAGGACCTCCATTCCTACTCGATATACATGGATGCCCTTGCTAAGTCAGGCAAGCCGTGGAAGGCTTTCAAAGTTTTCAAGGAGATGAAGCAGAGAGGCATTCGAATCGATACTGTTGCTTACAACACTGCGATCCATGCTGTTGGGATGGCACAGGGCGTCGACTCTGCTGTAAGGTTGTACAGACAGATGGTTGATGCCGGTTGCAAACCAAATATTGCCACTTACAATGCGATTATCAAGTTATTCTGCAAGGAGGGTAGGTTCAAGGAAGGGTATGCGTTTGTTCAGCAGATGCGCAAGACTGGCTGCAAGCCCGACGTGCTCACATACCATTGCTTTTTCCAGTATTTGAGCCGTCCACAAGAGGTCCTCGGACTGTTTGAGAAAATGCTTGAGAGGGGTTGCCAGCCAAGGATGGACACATATGTCATGCTTATTAAGAGGTTTGGACGCTGGGGGTTCCTTCGGCCGGTGTTCATTGTGTGGAAGGCAATGGAAGAGCAGGGTCTTAGCCCGGATGCATTTGCATACAATGCACTTATTGATGCATTACTGCAAAAGGGTATGGTGGATTTGGCTAGGAAGTATGATGAGAAAATGCTTGCGAAGGGACTCTCACCTAAGCCCAGGAAAGAGCTGGGGACTAAGTTGCCAGAAGCAGAATCTGATAGTGATAACACATTAGATGGTGTGCTTTGATTTCTGTGAGCTAGACAGGGATGTACATTATCATGTTCTACTACCCATTGTTATCATCGAAACAATTGTTTGAATATGCTCATGTTCCCAAATATAGGCTGTTTTCATTCAAGGAGATCTAATATGATTTCATGGATTTTATATGGAATTCAAAGCAGACAATCATATTGCATTGCCATCAGTTATCATTAGGTTATTATCTGATAAATCTGTGGAAGAGGTGGGCCTCCAGAGCATTATGTGTTCCTGGAATCATAGGTGGACATGGTCACATGTGTAGGAAAAAGAATTATCATATGCTCATGGGTCTGGTGCAGCGGTGAGAACTCTCACTGAGTCACCAGGTCGCACATTCGAAGCAGCCTCTTCGTATTTGCGGGGAAGACTTGCCTCGGTTTATTCCTTCCCCAGACCTCGCTCCTGTGTGAGCCTCCGGCACTAGATCCGCCCTTTTTTATACGCTCATGGGCGTCCACCCCAGTTGACATAAGAAGTGGATGAAAGAACCAAGACGAATCAGCAATGAAGCAAAGGCCATGTAGTTTGTAAGGTCCCTAGTAAGTCAGCTTCAACTTGCTAAACAGCTCATGACGAGACCTGGAGCAGGAATACTGCCATCACATCAGACAAACTACTTGGCAGGGGATAGATGGCAATCATGGCATTCAAACTCAACTTGTTAGCTCTCCTGTGAGCAGCATGAACTGGGTTCTCCTTTGATTATCAACTGGCTTCTGTTCGTAACAGATTTGGCATGCAGTGGCAACTTGGTCAGGCATAGATTCTCTTGAGTCCAAACCCAGTAGGAATCAAATCAAGATGCTTCACAAAATATGAGAAACTGGTGACACAAGCACGTTGATGGAAGTACCATGCAGGCCCATGAGGAGAAAATTCAGAATAGATATGTTTGAATGCCACGTACTGAGCAGCTTGGAGGACATTGACAATTGGCATGCCACATACTGTGTTGTCAAAAGCGCAACAGGACTTCTCGTAGGAAGTCTGAATCTATGGCTTCGCTTAGTCTTGGGGGAGAGGCTTTCTGACAGAAAGCCTAAATTGATGAAATGAACGTTCAAATGAT
CDS Sequence
- >Zm00001eb068720_T001
ATGCTCTTCCTCGTCCGGCGGCACCGCCGCCTCGCTCTCCCCTTCTCCAGTCTGCACGCACCCGCGCCCGCGCCCGCTCCCACACTGCCCTCCTCTCTCGACGCCTCGGCGGTGCTCAAGACGCTGTCCCTCTACGCCAACGATTGGCGCCGGGCGCTCGACTTCTTCCACTGGTCCGCCTCCCCCGCCGGCGCCAACTTGCCCCCGACCGCCGCCACCCTCGCCCGAGCGGTCGACATACTCGGCAAACACTTCGAGTTCCCGCTCGCCACCTCCCTCCTCCTTTCCCACCACGATCCTGGGGACCCCACCTTCCTCCGCCCCGCGCTCCGCGCCCTCCTCAACCGCCTCGCCGCCGCCAACCTCATCGACGACGCCCTCCACGCGTTCGAATCCACCGCTGCCTCCATCGGACTCTGCGATGAGGTCTCCTTCCACATCCTCGTCGACGCGCTCTGCGACCACCGCCGCGTCGACGAGGCCGACCACCTATGCTTCGGCAAGGACCCGCCGCCGTTCCCACCGGGCACGAAGACCCACAACCTGCTCCTCCGTGGGTGGGCTAAGGCCCACGCCTGGGCGCGTCTCCGCCAGCTGTGGTTCGACATGGACCGCCGCGGCGTTGCCAAGGACCTCCATTCCTACTCGATATACATGGATGCCCTTGCTAAGTCAGGCAAGCCGTGGAAGGCTTTCAAAGTTTTCAAGGAGATGAAGCAGAGAGGCATTCGAATCGATACTGTTGCTTACAACACTGCGATCCATGCTGTTGGGATGGCACAGGGCGTCGACTCTGCTGTAAGGTTGTACAGACAGATGGTTGATGCCGGTTGCAAACCAAATATTGCCACTTACAATGCGATTATCAAGTTATTCTGCAAGGAGGGTAGGTTCAAGGAAGGGTATGCGTTTGTTCAGCAGATGCGCAAGACTGGCTGCAAGCCCGACGTGCTCACATACCATTGCTTTTTCCAGTATTTGAGCCGTCCACAAGAGGTCCTCGGACTGTTTGAGAAAATGCTTGAGAGGGGTTGCCAGCCAAGGATGGACACATATGTCATGCTTATTAAGAGGTTTGGACGCTGGGGGTTCCTTCGGCCGGTGTTCATTGTGTGGAAGGCAATGGAAGAGCAGGGTCTTAGCCCGGATGCATTTGCATACAATGCACTTATTGATGCATTACTGCAAAAGGGTATGGTGGATTTGGCTAGGAAGTATGATGAGAAAATGCTTGCGAAGGGACTCTCACCTAAGCCCAGGAAAGAGCTGGGGACTAAGTTGCCAGAAGCAGAATCTGATAGTGATAACACATTAGATGGTGTGCTTTGA
Protein Sequence
- >Zm00001eb068720_P001
MLFLVRRHRRLALPFSSLHAPAPAPAPTLPSSLDASAVLKTLSLYANDWRRALDFFHWSASPAGANLPPTAATLARAVDILGKHFEFPLATSLLLSHHDPGDPTFLRPALRALLNRLAAANLIDDALHAFESTAASIGLCDEVSFHILVDALCDHRRVDEADHLCFGKDPPPFPPGTKTHNLLLRGWAKAHAWARLRQLWFDMDRRGVAKDLHSYSIYMDALAKSGKPWKAFKVFKEMKQRGIRIDTVAYNTAIHAVGMAQGVDSAVRLYRQMVDAGCKPNIATYNAIIKLFCKEGRFKEGYAFVQQMRKTGCKPDVLTYHCFFQYLSRPQEVLGLFEKMLERGCQPRMDTYVMLIKRFGRWGFLRPVFIVWKAMEEQGLSPDAFAYNALIDALLQKGMVDLARKYDEKMLAKGLSPKPRKELGTKLPEAESDSDNTLDGVL
Source: Genetic information comes from the article