Information report for Emp12;ZmPPR087
Gene Details
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Functional Descriptions
- The mitochondrial pentatricopeptide repeat protein Emp12 is involved in the splicing of three nad2 introns and seed development in maize
- The mitochondrial pentatricopeptide repeat protein Emp12 is involved in the splicing of three nad2 introns and seed development in maize.
- Emp12 is targeted to mitochondria. Loss-of-function mutation in Emp12 severely arrests embryo and endosperm development, causing embryo lethality.
- Emp12 is required for the trans-splicing of nad2 intron 2 and cis-splicing of nad2 introns 1 and 4, and is important to complex I biogenesis, and embryogenesis and endosperm development in maize.
- Emp12 plays an essential role in nad2 intron splicing, mitochondria functions, and embryo and endosperm development in maize.
Functional Keywords
Literature and News
Gene Resources
- NCBI ID: LOC100274078
- UniProt accessions: B4FYY0
- EMBL: BT042318 , CM007648
- EnsemblPlants: Zm00001eb068720_T001
- Gramene: Zm00001eb068720_T001
- KEGG: zma:100274078
- OMA: YSIYMDV
- ExpressionAtlas: Zm00001eb068720
- InterPro: IPR002885 , IPR011990
- PANTHER: PTHR47447 , PTHR47447:SF23
- PROSITE: PS51375
- Gene3D: 1.25.40.10
- OrthoDB: B4FYY0
- SMR: B4FYY0
Homologs
- Arabidopsis thaliana: AT3G22670
- Arachis hypogaea: arahy.Tifrunner.gnm1.ann1.IGD5ZI
- Capsicum annuum: T459_15790
- Daucus carota: DCAR_015659
- Glycine max: GmPPR576
- Malus domestica: MDP0000311683
- Oryza sativa: Rf1b, Rf1a;Rf5, Rf4;PPR782a, TCD10, OsWSL4, YSA, OsSOAR1, RF6, OsNPPR3;FLO14
- Triticum aestivum: Rf3;RFL29b, Rf3
Sequences
cDNA Sequence
- >Zm00001eb068720_T001
GTTTTTCCCGTGATTTCTAAAACCTTATTAATTCTTTACACACAAATTTTAATAAAATTGATAAAAACCACTTTGATAATCACTTCTAACAAGGACATTGAGATAATTTAAATGGTTGGGTGTTGAAGGAGGCAGTCTGTTCGGTTTTAGAGCTAGAGGAAAAAATTAGACTTTCAAAAAGATTTTGAAACCTAGATTACGATAGTTTAGTACTTCAGTTTATGAAGTCAAAAAAGTTTTTTTCCCCAATTATCACCAGCAGCCGGTTTGGGCTTGGGCCGGCCAGAGGCAGGCCGAGTCGCAAGCGCCGTTGCCATCTCTAACACGCGGCACTGTAGGAATCGGCTACCTCCGGCTGCTCTGCTTTGTGAGATGCTCTTCCTCGTCCGGCGGCACCGCCGCCTCGCTCTCCCCTTCTCCAGTCTGCACGCACCCGCGCCCGCGCCCGCTCCCACACTGCCCTCCTCTCTCGACGCCTCGGCGGTGCTCAAGACGCTGTCCCTCTACGCCAACGATTGGCGCCGGGCGCTCGACTTCTTCCACTGGTCCGCCTCCCCCGCCGGCGCCAACTTGCCCCCGACCGCCGCCACCCTCGCCCGAGCGGTCGACATACTCGGCAAACACTTCGAGTTCCCGCTCGCCACCTCCCTCCTCCTTTCCCACCACGATCCTGGGGACCCCACCTTCCTCCGCCCCGCGCTCCGCGCCCTCCTCAACCGCCTCGCCGCCGCCAACCTCATCGACGACGCCCTCCACGCGTTCGAATCCACCGCTGCCTCCATCGGACTCTGCGATGAGGTCTCCTTCCACATCCTCGTCGACGCGCTCTGCGACCACCGCCGCGTCGACGAGGCCGACCACCTATGCTTCGGCAAGGACCCGCCGCCGTTCCCACCGGGCACGAAGACCCACAACCTGCTCCTCCGTGGGTGGGCTAAGGCCCACGCCTGGGCGCGTCTCCGCCAGCTGTGGTTCGACATGGACCGCCGCGGCGTTGCCAAGGACCTCCATTCCTACTCGATATACATGGATGCCCTTGCTAAGTCAGGCAAGCCGTGGAAGGCTTTCAAAGTTTTCAAGGAGATGAAGCAGAGAGGCATTCGAATCGATACTGTTGCTTACAACACTGCGATCCATGCTGTTGGGATGGCACAGGGCGTCGACTCTGCTGTAAGGTTGTACAGACAGATGGTTGATGCCGGTTGCAAACCAAATATTGCCACTTACAATGCGATTATCAAGTTATTCTGCAAGGAGGGTAGGTTCAAGGAAGGGTATGCGTTTGTTCAGCAGATGCGCAAGACTGGCTGCAAGCCCGACGTGCTCACATACCATTGCTTTTTCCAGTATTTGAGCCGTCCACAAGAGGTCCTCGGACTGTTTGAGAAAATGCTTGAGAGGGGTTGCCAGCCAAGGATGGACACATATGTCATGCTTATTAAGAGGTTTGGACGCTGGGGGTTCCTTCGGCCGGTGTTCATTGTGTGGAAGGCAATGGAAGAGCAGGGTCTTAGCCCGGATGCATTTGCATACAATGCACTTATTGATGCATTACTGCAAAAGGGTATGGTGGATTTGGCTAGGAAGTATGATGAGAAAATGCTTGCGAAGGGACTCTCACCTAAGCCCAGGAAAGAGCTGGGGACTAAGTTGCCAGAAGCAGAATCTGATAGTGATAACACATTAGATGGTGTGCTTTGATTTCTGTGAGCTAGACAGGGATGTACATTATCATGTTCTACTACCCATTGTTATCATCGAAACAATTGTTTGAATATGCTCATGTTCCCAAATATAGGCTGTTTTCATTCAAGGAGATCTAATATGATTTCATGGATTTTATATGGAATTCAAAGCAGACAATCATATTGCATTGCCATCAGTTATCATTAGGTTATTATCTGATAAATCTGTGGAAGAGGTGGGCCTCCAGAGCATTATGTGTTCCTGGAATCATAGGTGGACATGGTCACATGTGTAGGAAAAAGAATTATCATATGCTCATGGGTCTGGTGCAGCGGTGAGAACTCTCACTGAGTCACCAGGTCGCACATTCGAAGCAGCCTCTTCGTATTTGCGGGGAAGACTTGCCTCGGTTTATTCCTTCCCCAGACCTCGCTCCTGTGTGAGCCTCCGGCACTAGATCCGCCCTTTTTTATACGCTCATGGGCGTCCACCCCAGTTGACATAAGAAGTGGATGAAAGAACCAAGACGAATCAGCAATGAAGCAAAGGCCATGTAGTTTGTAAGGTCCCTAGTAAGTCAGCTTCAACTTGCTAAACAGCTCATGACGAGACCTGGAGCAGGAATACTGCCATCACATCAGACAAACTACTTGGCAGGGGATAGATGGCAATCATGGCATTCAAACTCAACTTGTTAGCTCTCCTGTGAGCAGCATGAACTGGGTTCTCCTTTGATTATCAACTGGCTTCTGTTCGTAACAGATTTGGCATGCAGTGGCAACTTGGTCAGGCATAGATTCTCTTGAGTCCAAACCCAGTAGGAATCAAATCAAGATGCTTCACAAAATATGAGAAACTGGTGACACAAGCACGTTGATGGAAGTACCATGCAGGCCCATGAGGAGAAAATTCAGAATAGATATGTTTGAATGCCACGTACTGAGCAGCTTGGAGGACATTGACAATTGGCATGCCACATACTGTGTTGTCAAAAGCGCAACAGGACTTCTCGTAGGAAGTCTGAATCTATGGCTTCGCTTAGTCTTGGGGGAGAGGCTTTCTGACAGAAAGCCTAAATTGATGAAATGAACGTTCAAATGAT
CDS Sequence
- >Zm00001eb068720_T001
ATGCTCTTCCTCGTCCGGCGGCACCGCCGCCTCGCTCTCCCCTTCTCCAGTCTGCACGCACCCGCGCCCGCGCCCGCTCCCACACTGCCCTCCTCTCTCGACGCCTCGGCGGTGCTCAAGACGCTGTCCCTCTACGCCAACGATTGGCGCCGGGCGCTCGACTTCTTCCACTGGTCCGCCTCCCCCGCCGGCGCCAACTTGCCCCCGACCGCCGCCACCCTCGCCCGAGCGGTCGACATACTCGGCAAACACTTCGAGTTCCCGCTCGCCACCTCCCTCCTCCTTTCCCACCACGATCCTGGGGACCCCACCTTCCTCCGCCCCGCGCTCCGCGCCCTCCTCAACCGCCTCGCCGCCGCCAACCTCATCGACGACGCCCTCCACGCGTTCGAATCCACCGCTGCCTCCATCGGACTCTGCGATGAGGTCTCCTTCCACATCCTCGTCGACGCGCTCTGCGACCACCGCCGCGTCGACGAGGCCGACCACCTATGCTTCGGCAAGGACCCGCCGCCGTTCCCACCGGGCACGAAGACCCACAACCTGCTCCTCCGTGGGTGGGCTAAGGCCCACGCCTGGGCGCGTCTCCGCCAGCTGTGGTTCGACATGGACCGCCGCGGCGTTGCCAAGGACCTCCATTCCTACTCGATATACATGGATGCCCTTGCTAAGTCAGGCAAGCCGTGGAAGGCTTTCAAAGTTTTCAAGGAGATGAAGCAGAGAGGCATTCGAATCGATACTGTTGCTTACAACACTGCGATCCATGCTGTTGGGATGGCACAGGGCGTCGACTCTGCTGTAAGGTTGTACAGACAGATGGTTGATGCCGGTTGCAAACCAAATATTGCCACTTACAATGCGATTATCAAGTTATTCTGCAAGGAGGGTAGGTTCAAGGAAGGGTATGCGTTTGTTCAGCAGATGCGCAAGACTGGCTGCAAGCCCGACGTGCTCACATACCATTGCTTTTTCCAGTATTTGAGCCGTCCACAAGAGGTCCTCGGACTGTTTGAGAAAATGCTTGAGAGGGGTTGCCAGCCAAGGATGGACACATATGTCATGCTTATTAAGAGGTTTGGACGCTGGGGGTTCCTTCGGCCGGTGTTCATTGTGTGGAAGGCAATGGAAGAGCAGGGTCTTAGCCCGGATGCATTTGCATACAATGCACTTATTGATGCATTACTGCAAAAGGGTATGGTGGATTTGGCTAGGAAGTATGATGAGAAAATGCTTGCGAAGGGACTCTCACCTAAGCCCAGGAAAGAGCTGGGGACTAAGTTGCCAGAAGCAGAATCTGATAGTGATAACACATTAGATGGTGTGCTTTGA
Protein Sequence
- >Zm00001eb068720_P001
MLFLVRRHRRLALPFSSLHAPAPAPAPTLPSSLDASAVLKTLSLYANDWRRALDFFHWSASPAGANLPPTAATLARAVDILGKHFEFPLATSLLLSHHDPGDPTFLRPALRALLNRLAAANLIDDALHAFESTAASIGLCDEVSFHILVDALCDHRRVDEADHLCFGKDPPPFPPGTKTHNLLLRGWAKAHAWARLRQLWFDMDRRGVAKDLHSYSIYMDALAKSGKPWKAFKVFKEMKQRGIRIDTVAYNTAIHAVGMAQGVDSAVRLYRQMVDAGCKPNIATYNAIIKLFCKEGRFKEGYAFVQQMRKTGCKPDVLTYHCFFQYLSRPQEVLGLFEKMLERGCQPRMDTYVMLIKRFGRWGFLRPVFIVWKAMEEQGLSPDAFAYNALIDALLQKGMVDLARKYDEKMLAKGLSPKPRKELGTKLPEAESDSDNTLDGVL