Information report for Emp11;ZmPPR249
Gene Details
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Functional Descriptions
- The Empty pericarp11 (Emp11) gene, which encodes a P-type pentatricopeptide repeat (PPR) protein, is required for the development of maize seeds.
- The Emp11 mutants showed a failure in nad1 intron splicing, exhibited a severe reduction in complex I assembly and activity, mitochondrial structure disturbances, and an increase in alternative oxidase AOX2 and AOX3 levels.
- EMPTY PERICARP11 serves as a factor for splicing of mitochondrial nad1 intron and is required to ensure proper seed development in maize.
- The loss of Emp11 function seriously impairs embryo and endosperm development, resulting in empty pericarp seeds in maize, and alteration in Emp11 expression leads to quantitative variation in kernel size and weight.
- Emp11 affects complex I by modulating the intron splicing of nad1 in maize mitochondria.
Functional Keywords
Literature and News
Gene Resources
- NCBI ID: LOC103654325
- UniProt accessions: A0A1D6QHB6 , A0A3L6EY76 , A0A3L6F8A8
- EMBL: NCVQ01000005
- AlphaFoldDB: A0A3L6F8A8
- InterPro: IPR002885 , IPR011990
- PANTHER: PTHR45613 , PTHR45613:SF9
- SUPFAM: SSF81901
- PROSITE: PS51375
- Gene3D: 1.25.40.10
Sequences
cDNA Sequence
- >Zm00001eb196310_T001
ACGAAGCGTGGCGCTGGCTCCGCTGGCCATCGACTCGCGCCGCGGCCGTCTCCACCTCCTCCACCTCGCTCGTGCAGTCGCGCTCGCAGGCCGCGGCTGCCGCTGCCGCCGCCGCAGCAGCGGTTGATGTCAGCGAGGCTCCTGCCCCGCGTCACACCGCTCCCGCGCCGCCGCCACGGCCTGAGACCGAGCCCGGCCATCGCCCCCGCCCTCGCGGCCTCGCTCGCGCGCGTGCTCGCCGCGCGCTCTACCGACCCGTCCTGGTCCAGCTCCCTCGCGGCGCTCCTCCCTTCCCCGCTCCCCGACGCGCGCCTCGCCGCCGCCGTCTCCGCGCTCGGGGACCACAACCCTGACCTCGCGGCCGCGCTCCTCTCCTGGCACCGGGCCCACCACTGCCATGGCGGCGGCCCGACCCCGCTCGCCCACTCGGCGCTGCTCCGCCTCCTCGCCCGCGCCCGCCGCTTCGACGCCGCGGACGCCGCACTCCGCTGCATGTCCCTCGCGGGGGCCGCGCCCACGCGCGGGAGCCTCGGCGCGCTCGCCGCCGCCTACGCGGACGCCGGCATGGAAGAGAAAGCCGCCGAGGCGTGCGCGCGCGCCAGGGAACTGCACGGCGCGCTCCCCGACGCGCCGGACTGCAACTGCCTGCTCAGGCTCCTCGTGGAGCGCCGACGGTGGGAGCGCGCCCGGGGGCTGTACGGCGAGATGCTCGTCCGGGAGGGCGGCGCGGATGACTACAGCACCTGCGTCATGGTCCGCGGGCTGTGCTTGGAAGGGCGGGTGGAGGAGGGGAGGGGCCTCATTGAGGCCAGGTGGGGAGAAGGGTGCGTCCCGGGTGCCGTTTTCTACAATGTGCTCATCGACGGGTACTGCCGGCGTGGGGACATCGGGAGGGGGCTGCTGCTGTTGGGCGAGATGGAGACGAAGGGGATCATCCCAACCGTGGTTACGTATGGTGCTATCATTCACTGGCTTGGGAGGAAAGGCGATTTGACGAAGGTTGAGAGCTTACTTGGGGAGATGAGGGCGAGAGGGCTGTCCCCCAACGTGCAGATTTACAACACCGTGATCAATGCATTGTGCAAATGCCGGTCGGCGTCACAGGCATCAGATATGCTGAACCAAATGGTCAAAAGCAGGTTTAACCCAGATGTCGTCACGTTTAATACTATGATAGCAGGGTTTTGCCGGGAAGGGGATGTTCGAGAGGCTCTGAAACTTTTGAGGGAGGCCATTAGGAGGGGGTTGGAACCGAATCAGTTAAGCTATACGCCTTTGATTCATGGCTTCTGCGTCAGAGGAGAGGCGATGGTTGCATCAGATTTGCTTGTGGAAATGATGGGGAGAGGGCATACTCCGGACATGATCACACTTGGAGCATTGATTCATGGCCTCGTTGTTTCTGGGCAGGTTAATGATGCCTTGATTGTTCGGGAGAAGATGGCAGAGAGACAGGTGATGCCTGATGCTAACATATATAATGTGCTGATCAGTGGCCTATGCAAGAAACGGATGCTTTCTGCAGCTAAGAACCTTCTTGAAGAGATGCTTGAGCAAAAAGTCCAGCCTGATAAATTTATATATACTACTCTGATTGATGGGTTCGTTAGGAGTGACAAACTCAGTGATGCGAGGAAAATATTCGAATTCATGGAAGAAAAAGCCTGCCCTGATATTGTTGCCTACAATGTTATGATAAAAGGATATTGTAAGTTTGGAATGATGAAAGAGGCGGTTACATGCATGAGCAGCATGAGAAAGGCTGGGTGTATCCCAGATGAGTTTACATATACTACACTTGTCGATGGCTACGCTAAAAAAGGTGACATAAGTGCATCACTTAGGCTTTTATGTGATATGATGAAGCGAAGATGCAAGCCGAATATTTTTACATATGCATCACTAATATGTGGATACTGCAACATCGGTGACACATACAGTGCAGAAGATTTATTTGCAAAGATGCAGTCTGAGGGTCTATTTCCCAATGTTGTACACTACACAGTTCTAATTGGTAGTCTCTTTAAGAAAGATAAAGTGATCCAAGCTGCAGCGTACTTTGAGCATATGCTGCTTAACCATTGCCCTCCTAATGATGCTACAGTGCATTATTTAGTGAATGGGCTCGTAAACTGTAGGCACGGTATGGTCAACTCAAACCGCAGTGATACTAAACAGGCTCACGAGAAGAGTGCCCTTTTAGATGTATTCAGGGGATTGATTTCTGATGGATTGGACCCAAGGATTTCAGCGTACAATGCTATAATCTTCAGCTTGTGTAGACATAATATGCTTGGGAAGGCAATGGACCTGAAAGATAAGATGTCTAACAAAGGCTGCTTGCCAGACCCTATAACCTTCCTTTCACTTCTTTATGGATTTTCTTCTGCTGGAGAATCAGGGAAATGGAGGAGTGCCTTACCTAATGAATTTCAGCAGGATGAATTTGAGATAATCACCAAGTACATGGCATTATTCAATCAGCATGTAACTAGTTCAGTTGTAGGTGAAGTCTCTAGGATTTTACAGTTATATTCTGAGGAGTTTCAGTTCCTCAAACAACCAGAGCAGAGATTCGCTGGTTCCTGACCCCCACAATGTCATGGTTTACCTGGCACTTGGAATCAAGGTATAACAAGAAGAATAGCATGGTTTGAAATGCCAAGGAAGCTCCTGACAGGGTGTTTCCTCCAGCAATGAATTTCAAGACCGCAAGTGCAATCTGCAAGGCAAAGTTTCCGGTGGGGATCGTCCTTGAAGGTACGCGAATTAAATCAGCCGCTCCCTCGTTACAGCCAGCAGCACTGTTGAAACTTTTTCCCCCCCACCTGTAATGTTAGACATTAGCCAAAAACATAAAGTTATTTCCCGTCTG
CDS Sequence
- >Zm00001eb196310_T001
ATGTCAGCGAGGCTCCTGCCCCGCGTCACACCGCTCCCGCGCCGCCGCCACGGCCTGAGACCGAGCCCGGCCATCGCCCCCGCCCTCGCGGCCTCGCTCGCGCGCGTGCTCGCCGCGCGCTCTACCGACCCGTCCTGGTCCAGCTCCCTCGCGGCGCTCCTCCCTTCCCCGCTCCCCGACGCGCGCCTCGCCGCCGCCGTCTCCGCGCTCGGGGACCACAACCCTGACCTCGCGGCCGCGCTCCTCTCCTGGCACCGGGCCCACCACTGCCATGGCGGCGGCCCGACCCCGCTCGCCCACTCGGCGCTGCTCCGCCTCCTCGCCCGCGCCCGCCGCTTCGACGCCGCGGACGCCGCACTCCGCTGCATGTCCCTCGCGGGGGCCGCGCCCACGCGCGGGAGCCTCGGCGCGCTCGCCGCCGCCTACGCGGACGCCGGCATGGAAGAGAAAGCCGCCGAGGCGTGCGCGCGCGCCAGGGAACTGCACGGCGCGCTCCCCGACGCGCCGGACTGCAACTGCCTGCTCAGGCTCCTCGTGGAGCGCCGACGGTGGGAGCGCGCCCGGGGGCTGTACGGCGAGATGCTCGTCCGGGAGGGCGGCGCGGATGACTACAGCACCTGCGTCATGGTCCGCGGGCTGTGCTTGGAAGGGCGGGTGGAGGAGGGGAGGGGCCTCATTGAGGCCAGGTGGGGAGAAGGGTGCGTCCCGGGTGCCGTTTTCTACAATGTGCTCATCGACGGGTACTGCCGGCGTGGGGACATCGGGAGGGGGCTGCTGCTGTTGGGCGAGATGGAGACGAAGGGGATCATCCCAACCGTGGTTACGTATGGTGCTATCATTCACTGGCTTGGGAGGAAAGGCGATTTGACGAAGGTTGAGAGCTTACTTGGGGAGATGAGGGCGAGAGGGCTGTCCCCCAACGTGCAGATTTACAACACCGTGATCAATGCATTGTGCAAATGCCGGTCGGCGTCACAGGCATCAGATATGCTGAACCAAATGGTCAAAAGCAGGTTTAACCCAGATGTCGTCACGTTTAATACTATGATAGCAGGGTTTTGCCGGGAAGGGGATGTTCGAGAGGCTCTGAAACTTTTGAGGGAGGCCATTAGGAGGGGGTTGGAACCGAATCAGTTAAGCTATACGCCTTTGATTCATGGCTTCTGCGTCAGAGGAGAGGCGATGGTTGCATCAGATTTGCTTGTGGAAATGATGGGGAGAGGGCATACTCCGGACATGATCACACTTGGAGCATTGATTCATGGCCTCGTTGTTTCTGGGCAGGTTAATGATGCCTTGATTGTTCGGGAGAAGATGGCAGAGAGACAGGTGATGCCTGATGCTAACATATATAATGTGCTGATCAGTGGCCTATGCAAGAAACGGATGCTTTCTGCAGCTAAGAACCTTCTTGAAGAGATGCTTGAGCAAAAAGTCCAGCCTGATAAATTTATATATACTACTCTGATTGATGGGTTCGTTAGGAGTGACAAACTCAGTGATGCGAGGAAAATATTCGAATTCATGGAAGAAAAAGCCTGCCCTGATATTGTTGCCTACAATGTTATGATAAAAGGATATTGTAAGTTTGGAATGATGAAAGAGGCGGTTACATGCATGAGCAGCATGAGAAAGGCTGGGTGTATCCCAGATGAGTTTACATATACTACACTTGTCGATGGCTACGCTAAAAAAGGTGACATAAGTGCATCACTTAGGCTTTTATGTGATATGATGAAGCGAAGATGCAAGCCGAATATTTTTACATATGCATCACTAATATGTGGATACTGCAACATCGGTGACACATACAGTGCAGAAGATTTATTTGCAAAGATGCAGTCTGAGGGTCTATTTCCCAATGTTGTACACTACACAGTTCTAATTGGTAGTCTCTTTAAGAAAGATAAAGTGATCCAAGCTGCAGCGTACTTTGAGCATATGCTGCTTAACCATTGCCCTCCTAATGATGCTACAGTGCATTATTTAGTGAATGGGCTCGTAAACTGTAGGCACGGTATGGTCAACTCAAACCGCAGTGATACTAAACAGGCTCACGAGAAGAGTGCCCTTTTAGATGTATTCAGGGGATTGATTTCTGATGGATTGGACCCAAGGATTTCAGCGTACAATGCTATAATCTTCAGCTTGTGTAGACATAATATGCTTGGGAAGGCAATGGACCTGAAAGATAAGATGTCTAACAAAGGCTGCTTGCCAGACCCTATAACCTTCCTTTCACTTCTTTATGGATTTTCTTCTGCTGGAGAATCAGGGAAATGGAGGAGTGCCTTACCTAATGAATTTCAGCAGGATGAATTTGAGATAATCACCAAGTACATGGCATTATTCAATCAGCATGTAACTAGTTCAGTTGTAGGTGAAGTCTCTAGGATTTTACAGTTATATTCTGAGGAGTTTCAGTTCCTCAAACAACCAGAGCAGAGATTCGCTGGTTCCTGA
Protein Sequence
- >Zm00001eb196310_P001
MSARLLPRVTPLPRRRHGLRPSPAIAPALAASLARVLAARSTDPSWSSSLAALLPSPLPDARLAAAVSALGDHNPDLAAALLSWHRAHHCHGGGPTPLAHSALLRLLARARRFDAADAALRCMSLAGAAPTRGSLGALAAAYADAGMEEKAAEACARARELHGALPDAPDCNCLLRLLVERRRWERARGLYGEMLVREGGADDYSTCVMVRGLCLEGRVEEGRGLIEARWGEGCVPGAVFYNVLIDGYCRRGDIGRGLLLLGEMETKGIIPTVVTYGAIIHWLGRKGDLTKVESLLGEMRARGLSPNVQIYNTVINALCKCRSASQASDMLNQMVKSRFNPDVVTFNTMIAGFCREGDVREALKLLREAIRRGLEPNQLSYTPLIHGFCVRGEAMVASDLLVEMMGRGHTPDMITLGALIHGLVVSGQVNDALIVREKMAERQVMPDANIYNVLISGLCKKRMLSAAKNLLEEMLEQKVQPDKFIYTTLIDGFVRSDKLSDARKIFEFMEEKACPDIVAYNVMIKGYCKFGMMKEAVTCMSSMRKAGCIPDEFTYTTLVDGYAKKGDISASLRLLCDMMKRRCKPNIFTYASLICGYCNIGDTYSAEDLFAKMQSEGLFPNVVHYTVLIGSLFKKDKVIQAAAYFEHMLLNHCPPNDATVHYLVNGLVNCRHGMVNSNRSDTKQAHEKSALLDVFRGLISDGLDPRISAYNAIIFSLCRHNMLGKAMDLKDKMSNKGCLPDPITFLSLLYGFSSAGESGKWRSALPNEFQQDEFEIITKYMALFNQHVTSSVVGEVSRILQLYSEEFQFLKQPEQRFAGS