Gene Details:

Functional Descriptions:

  • Determined that DEK41 is only localized to the mitochondria and identified a splicing defect of nad4 intron 3 in the dek41 mutant.
  • Dek43 is a P-type pentatricopeptide repeat (PPR) protein responsible for the Cis-splicing of nad4 in maize mitochondria.
  • Dek43, a dual-localized PPR protein, plays an important role in maintaining mitochondrial function and maize kernel development.
  • Mutations in Dek43 affect cis-splicing of mitochondrial nad4 introns 1 and 3.
  • The Dek43-1 mutant exhibits reduced mitochondrial complex I abundance and activity.
  • Dek43 mutations cause reduced splicing efficiency of mitochondrial nad4 intron 3, resulting in severely reduced complex I assembly and NADH dehydrogenase activity.

Literature:

Gene Resources:

Sequences:

cDNA Sequence
  • >Zm00001eb317730_T001
    GTGCTCTGTCCATATGCAATCCCATCGTGGCACTGGAACCTTCTCCCATTTCGTCGACTGTGAATACAGAACTTGGACAGCATCACGTCGCTGGATCAGAGTGCCATTTCTGTTCTCAGAAGGTTTCTTTGTGCCTCAGACGACCCATCATCCTCCGCATAACTCCATCGACGTCGATGGCCTGCATGTACATCAACGGTCACTGCCTTGTCCAGTAAGTAACACGTACGAGACGCCGCCATGGCGGGCAACAAGTTCTCGTCGTACCACCTCGCCGCGGCCCTCCGCCGCGAGCCGGACCCCGCCGCCGCGCTCCGCCTCTTCCTCAACCCTCCCGCATCCGCCACCCCGTTCCGCTATTCCCTCCGCTGCTACGACCTCATCATCTCCAGGCTCGCCGCCGCGCGCCTCTTCCCGGCCATGGAGTCCATCCTCTCGCGCCTGGCCTCCTCCTCGGGTCCCCGGCCCCGCGAGCAGCTCCTCTGCCGCGTCGTCTCCGCCTACGGCCGCGCCCGCCTCCCCGCCGCCGCGCGCCGCGCCTTCGCGCACCCGGCCTTCCCTGGGCCCCGCACCGCCAGGGCTCTCAACGCCCTCCTCCACGCCCTGCTCGCCTGCCGCGCTCCCCTCCGCGACCTCCTCGCCGTCTGCCGTGACGCTGGGACCCCGCCGGACGCGTGCACCTATAACATTCTCATGCGGGCAGCGGCTGCGTCCGGCTCCCTTGCCCACGCGCGCCACATGTTCGACGAAATGCTGCGACGGGGCATCGCGCCGACTGTAGTCACTTTCGGCACCCTCGTCGCCGCGCTGTGCGCTGCTGGCCAGCTGGAAGGCGCGTTCGAGGTGAAGGAAGTGATGGTCCGGCAGTACCACGTGTTGCCGAACGTGTATGTGTATACAAGTCTGATCAAGGGGCTCTGTGAGAAAGGGGATGTGGATGCTGCGGTGGCGCTCAAGGAAGAGATGGCAGGGAAGGCAGATCTTGTGCTGGATTCTGCTGTGTATGCGACGCTTGTACGGGCGTTGTTCCAGGTAGGGCGAAAAGGTGCGGTAGTTGGATTGCTGGAGGAGATGAAGGGGAGTGGGGTTGTGGCTGATACGGTGGTGTACAATGCCATGCTCGCAGGCTTTTGTGAGGATGAGAAGGATCTTGCTGCTGCGTTCGCTGTGCTTGACGATATGCAGAAGAATGGGTGCAAGGCGGATGCGGTGAGCTATAATACATTAGTTGCAGGGTTGTGCAAGCTGGGCCGGTGGCGGGATGCACATGAATTGGTTGAGGATATGCCAAGGCAGGGGTGCCATCCAGATGTGGTGACCTACAGAATGCTCTTTGATGGGATGTGTGCTGCTGAGGAGTTTCTTGAAGCAAACCAGGTTTTGGATGAGATGGTTTTCAAGGGTTTTGCGCCAAGCAACGATGGTGCACAGAAGTTTGTCCAGGGGATTGAGAAGGAAGGAGATGTGGTATTGCTAGAGTCAGTGTTGTGCCGACTAGCGAAGGTGAATGCTTTGGTGCCAAGTGGATGGGAAAAAGCTGTAAGTGGTGCGCTGAATGATCCCACAGAGTTGAGGCTAGAGAAGCAGCTTGACTCTTTAAGAATTGCTTGATTAGACACCATAGTGGATTTGATCAATACAGTTTGAGTAGCAAAAAAATGGCAAGCATGATTTTTAAAGAAATCAATTTGTTCATCTGTTATACAAGGCTGCCTTGCAGGAGTCTTACCCAATTCAGGTTAGTTTCTTGCAGGTAGTATTATTAAAGTCAGAGAAAGATTAAAATGGAATCTAAGGTGTGCAACTTATTCAAGTGAAGTTAATTTGCCATAAGATTGGAATATAAGATGGATCTATGGCAAAAAAGAATATTCGTGTTTGCAAGTACATGATCGTATATATTCTAGTTTTTTTGGTATGCTTCTAAATATGTTGTTATTTTGTTCCCTTGCTGACAATAATGTGATCTTTTGAATACTAATATACTGCCTCCTGTCACTTT
CDS Sequence
  • >Zm00001eb317730_T001
    ATGGCGGGCAACAAGTTCTCGTCGTACCACCTCGCCGCGGCCCTCCGCCGCGAGCCGGACCCCGCCGCCGCGCTCCGCCTCTTCCTCAACCCTCCCGCATCCGCCACCCCGTTCCGCTATTCCCTCCGCTGCTACGACCTCATCATCTCCAGGCTCGCCGCCGCGCGCCTCTTCCCGGCCATGGAGTCCATCCTCTCGCGCCTGGCCTCCTCCTCGGGTCCCCGGCCCCGCGAGCAGCTCCTCTGCCGCGTCGTCTCCGCCTACGGCCGCGCCCGCCTCCCCGCCGCCGCGCGCCGCGCCTTCGCGCACCCGGCCTTCCCTGGGCCCCGCACCGCCAGGGCTCTCAACGCCCTCCTCCACGCCCTGCTCGCCTGCCGCGCTCCCCTCCGCGACCTCCTCGCCGTCTGCCGTGACGCTGGGACCCCGCCGGACGCGTGCACCTATAACATTCTCATGCGGGCAGCGGCTGCGTCCGGCTCCCTTGCCCACGCGCGCCACATGTTCGACGAAATGCTGCGACGGGGCATCGCGCCGACTGTAGTCACTTTCGGCACCCTCGTCGCCGCGCTGTGCGCTGCTGGCCAGCTGGAAGGCGCGTTCGAGGTGAAGGAAGTGATGGTCCGGCAGTACCACGTGTTGCCGAACGTGTATGTGTATACAAGTCTGATCAAGGGGCTCTGTGAGAAAGGGGATGTGGATGCTGCGGTGGCGCTCAAGGAAGAGATGGCAGGGAAGGCAGATCTTGTGCTGGATTCTGCTGTGTATGCGACGCTTGTACGGGCGTTGTTCCAGGTAGGGCGAAAAGGTGCGGTAGTTGGATTGCTGGAGGAGATGAAGGGGAGTGGGGTTGTGGCTGATACGGTGGTGTACAATGCCATGCTCGCAGGCTTTTGTGAGGATGAGAAGGATCTTGCTGCTGCGTTCGCTGTGCTTGACGATATGCAGAAGAATGGGTGCAAGGCGGATGCGGTGAGCTATAATACATTAGTTGCAGGGTTGTGCAAGCTGGGCCGGTGGCGGGATGCACATGAATTGGTTGAGGATATGCCAAGGCAGGGGTGCCATCCAGATGTGGTGACCTACAGAATGCTCTTTGATGGGATGTGTGCTGCTGAGGAGTTTCTTGAAGCAAACCAGGTTTTGGATGAGATGGTTTTCAAGGGTTTTGCGCCAAGCAACGATGGTGCACAGAAGTTTGTCCAGGGGATTGAGAAGGAAGGAGATGTGGTATTGCTAGAGTCAGTGTTGTGCCGACTAGCGAAGGTGAATGCTTTGGTGCCAAGTGGATGGGAAAAAGCTGTAAGTGGTGCGCTGAATGATCCCACAGAGTTGAGGCTAGAGAAGCAGCTTGACTCTTTAAGAATTGCTTGA
Protein Sequence
  • >Zm00001eb317730_P001
    MAGNKFSSYHLAAALRREPDPAAALRLFLNPPASATPFRYSLRCYDLIISRLAAARLFPAMESILSRLASSSGPRPREQLLCRVVSAYGRARLPAAARRAFAHPAFPGPRTARALNALLHALLACRAPLRDLLAVCRDAGTPPDACTYNILMRAAAASGSLAHARHMFDEMLRRGIAPTVVTFGTLVAALCAAGQLEGAFEVKEVMVRQYHVLPNVYVYTSLIKGLCEKGDVDAAVALKEEMAGKADLVLDSAVYATLVRALFQVGRKGAVVGLLEEMKGSGVVADTVVYNAMLAGFCEDEKDLAAAFAVLDDMQKNGCKADAVSYNTLVAGLCKLGRWRDAHELVEDMPRQGCHPDVVTYRMLFDGMCAAEEFLEANQVLDEMVFKGFAPSNDGAQKFVQGIEKEGDVVLLESVLCRLAKVNALVPSGWEKAVSGALNDPTELRLEKQLDSLRIA

Source: Genetic information comes from the article