Gene Details:
- Gene ID: Zm00001eb214410
- Gene Symbol: CYP81A9 ben1 nsf1
- Gene Name: bentazon resistance1
- Genome: Zm-B73-REFERENCE-NAM-5.0
- Species: Zea mays
Functional Descriptions:
- Gene annotation results showed that a cytochrome P450 gene (CYP81A9) appeared to be the candidate gene of Nss associated with nicosulfuron sensitivity in maize.
- CYP81A9 gene was then isolated from the genomic DNA of nicosulfuron-tolerant and nicosulfuron-sensitive maize via PCR amplification.
- A candidate cytochrome P450 gene CYP81A9 was identified to be involved in nicosulfuron metabolism in maize, and several mutation sites were also found in nicosulfuron-sensitive maize.
- Recessive susceptibility to nicosulfuron (Accent) and mesotrione herbicides,dominant ben1 resistant, with Ben2.
Function-related keywords:
Literature:
- Rapid identification of a candidate nicosulfuron sensitivity gene (Nss) in maize (Zea mays L.) via combining bulked segregant analysis and RNA-seq. DOI: 10.1007/s00122-019-03282-8 ; PMID: 30652203
Related News:
Gene Resources:
- NCBI ID: LOC103625869
- UniProt accessions: P21569
Sequences:
cDNA Sequence
- >Zm00001eb214410_T001
GGAAAAAGCCGCGACGATGGAGGGAGGGATGGCAACCTCCACGAAGCCGCAACAAGATAATAGACACTGGTCAGGCTTAGAAAAATATCGTGCAGATCCTATATACTACCGCTGCATACGTCCGGCCGGAACCATCCTCTCCGGACGTACGTCATCAACTGCGTGTGCAAAATTGTCTGCCAAACTTTATTATACTTCAAGTTGTACTAGATCCTTGTCAAGTTTGAATCCCTGTGTGTGTATATATGCAGCCACGAAGGATGGCGCCACACAACCACCAACTCGCGATCCATCGATTTGCAGAACACCACCCAACAGCCAGACCATCACTCGATCGGTAGACATGGATAAGGCCTACATCGCCGCCCTCTCCGCCGCCGCCCTCTTCTTGCTCCACTACCTCCTGGGCCGCCGGGCCGGCGGCGAGGGCAAGGCCAAGGCCAAGGGCTCGCGGCGGCGGCTCCCGCCGAGCCCTCCGGCGATCCCGTTCCTGGGCCACCTCCACCTCGTCAAGGCCCCGTTCCACGGGGCGCTGGCCCGCCTCGCGGCGCGCCACGGCCCGGTGTTCTCCATGCGCCTGGGGACCCGGCGCGCCGTGGTCGTGTCGTCGCCGGACTGCGCCAGGGAGTGCTTCACGGAGCACGACGTGAACTTCGCGAACCGGCCGCTGTTCCCGTCGATGCGGCTGGCGTCCTTCGACGGCGCCATGCTCTCCGTGTCCAGCTACGGCCCGTACTGGCGCAACCTGCGCCGCGTCGCCGCCGTGCAGCTCCTCTCCGCGCACCGCGTCGGGTGCATGGCCCCCGCCATCGAAGCGCAGGTGCGCGCCATGGTGCGGAGGATGGACCGCGCCGCCGCGGCCGGCGGCGGCGGCGTCGCGCGCGTCCAGCTCAAGCGGCGGCTGTTCGAGCTCTCCCTCAGCGTGCTCATGGAGACCATCGCGCACACCAAGACGTCCCGCGCCGAGGCCGACGCCGACTCGGACATGTCGACCGAGGCCCACGAGTTCAAGCAGATCGTCGACGAGCTCGTGCCGTACATCGGCACGGCCAACCGCTGGGACTACCTGCCGGTGCTGCGCTGGTTCGACGTGTTCGGCGTGAGGAACAAGATCCTCGACGCCGTGGGCAGAAGGGACGCGTTCCTGGGGCGGCTCATCGACGGGGAGCGGCGGAGGCTGGACGCTGGCGACGAGAGCGAAAGTAAGAGCATGATTGCGGTGCTGCTCACTCTGCAGAAGTCCGAGCCAGAGGTCTACACTGACACTGTGATCACTGCTCTTTGCGCGAACCTATTCGGCGCCGGAACGGAGACCACGTCCACCACGACGGAATGGGCCATGTCACTGCTGCTGAACCACCGGGAGGCGCTCAAGAAGGCGCAGGCCGAGATCGACGCGGCGGTGGGCACCTCCCGCCTGGTGACCGCGGACGACGTGCCCCACCTCACCTACCTGCAGTGCATCGTCGACGAGACGCTGCGCCTGCACCCGGCCGCGCCGCTGCTGCTGCCGCACGAGTCCGCCGCGGACTGCACGGTCGGCGGCTACGACGTGCCGCGCGGCACGATGCTGCTGGTCAACGTGCACGCGGTCCACAGGGACCCCGCGGTGTGGGAGGACCCGGACAGGTTCGTGCCGGAGCGGTTCGAGGGCGCCGGCGGCAAGGCCGAGGGGCGCCTGCTGATGCCGTTCGGGATGGGGCGGCGCAAGTGCCCCGGGGAGACGCTCGCGCTGCGGACCGTCGGGCTGGTGCTCGCCACGCTGCTCCAGTGCTTCGACTGGGACACGGTTGATGGAGCTCAGGTTGACATGAAGGCTAGCGGCGGGCTGACCATGCCCCGGGCCGTCCCGTTGGAGGCCATGTGCAGGCCGCGTACAGCTATGCGTGGTGTTCTTAAGAGGCTCTGAAAACCTCATGGATCGAATTGCTGGCATCGTCTGAAGGGTGTATGACGTAGCTTCCGAGTTCCGAGCATATATATTCACTTGCCTTGTACTAGTTGATTTTCGCCGAGTGTATGGAATGGATTTTCTTTTTTTTTCTTGCAATGGATGTGAATTTTGTTTTTCTCGACGTTACAAGAAGTGAATCAACCTAGCTTCTCTTTGAGCCATGCTGGCTTCGGTTTCACTATATATGTACCTTTTTAGAGGAAGATTCACTATATAGTGGGCGATCTTTTTGGTTTAGTTTAGGGTGTGTTTGGTTTATAGAGATTAATTTTTATTCCCCCTTCTTTAGTCTATTTTAGTCCCTAAATTATCAAATACGGAAACTAAAACTCTATTTTAGTTTCCGTATTTTGCAATTTAGGAACTAAAATAGAATAAAATGGTGGGACTAAAAATTATTTCCTGGAAACCAAACACCCCTTAGTTTTTTTTCATAGGCTTCCTTATGTCAGTACTACTATATGATATGAATATGATGATGCAGATGCACCCAATGTTTTTGC
CDS Sequence
- >Zm00001eb214410_T001
ATGGATAAGGCCTACATCGCCGCCCTCTCCGCCGCCGCCCTCTTCTTGCTCCACTACCTCCTGGGCCGCCGGGCCGGCGGCGAGGGCAAGGCCAAGGCCAAGGGCTCGCGGCGGCGGCTCCCGCCGAGCCCTCCGGCGATCCCGTTCCTGGGCCACCTCCACCTCGTCAAGGCCCCGTTCCACGGGGCGCTGGCCCGCCTCGCGGCGCGCCACGGCCCGGTGTTCTCCATGCGCCTGGGGACCCGGCGCGCCGTGGTCGTGTCGTCGCCGGACTGCGCCAGGGAGTGCTTCACGGAGCACGACGTGAACTTCGCGAACCGGCCGCTGTTCCCGTCGATGCGGCTGGCGTCCTTCGACGGCGCCATGCTCTCCGTGTCCAGCTACGGCCCGTACTGGCGCAACCTGCGCCGCGTCGCCGCCGTGCAGCTCCTCTCCGCGCACCGCGTCGGGTGCATGGCCCCCGCCATCGAAGCGCAGGTGCGCGCCATGGTGCGGAGGATGGACCGCGCCGCCGCGGCCGGCGGCGGCGGCGTCGCGCGCGTCCAGCTCAAGCGGCGGCTGTTCGAGCTCTCCCTCAGCGTGCTCATGGAGACCATCGCGCACACCAAGACGTCCCGCGCCGAGGCCGACGCCGACTCGGACATGTCGACCGAGGCCCACGAGTTCAAGCAGATCGTCGACGAGCTCGTGCCGTACATCGGCACGGCCAACCGCTGGGACTACCTGCCGGTGCTGCGCTGGTTCGACGTGTTCGGCGTGAGGAACAAGATCCTCGACGCCGTGGGCAGAAGGGACGCGTTCCTGGGGCGGCTCATCGACGGGGAGCGGCGGAGGCTGGACGCTGGCGACGAGAGCGAAAGTAAGAGCATGATTGCGGTGCTGCTCACTCTGCAGAAGTCCGAGCCAGAGGTCTACACTGACACTGTGATCACTGCTCTTTGCGCGAACCTATTCGGCGCCGGAACGGAGACCACGTCCACCACGACGGAATGGGCCATGTCACTGCTGCTGAACCACCGGGAGGCGCTCAAGAAGGCGCAGGCCGAGATCGACGCGGCGGTGGGCACCTCCCGCCTGGTGACCGCGGACGACGTGCCCCACCTCACCTACCTGCAGTGCATCGTCGACGAGACGCTGCGCCTGCACCCGGCCGCGCCGCTGCTGCTGCCGCACGAGTCCGCCGCGGACTGCACGGTCGGCGGCTACGACGTGCCGCGCGGCACGATGCTGCTGGTCAACGTGCACGCGGTCCACAGGGACCCCGCGGTGTGGGAGGACCCGGACAGGTTCGTGCCGGAGCGGTTCGAGGGCGCCGGCGGCAAGGCCGAGGGGCGCCTGCTGATGCCGTTCGGGATGGGGCGGCGCAAGTGCCCCGGGGAGACGCTCGCGCTGCGGACCGTCGGGCTGGTGCTCGCCACGCTGCTCCAGTGCTTCGACTGGGACACGGTTGATGGAGCTCAGGTTGACATGAAGGCTAGCGGCGGGCTGACCATGCCCCGGGCCGTCCCGTTGGAGGCCATGTGCAGGCCGCGTACAGCTATGCGTGGTGTTCTTAAGAGGCTCTGA
Protein Sequence
- >Zm00001eb214410_P001
MDKAYIAALSAAALFLLHYLLGRRAGGEGKAKAKGSRRRLPPSPPAIPFLGHLHLVKAPFHGALARLAARHGPVFSMRLGTRRAVVVSSPDCARECFTEHDVNFANRPLFPSMRLASFDGAMLSVSSYGPYWRNLRRVAAVQLLSAHRVGCMAPAIEAQVRAMVRRMDRAAAAGGGGVARVQLKRRLFELSLSVLMETIAHTKTSRAEADADSDMSTEAHEFKQIVDELVPYIGTANRWDYLPVLRWFDVFGVRNKILDAVGRRDAFLGRLIDGERRRLDAGDESESKSMIAVLLTLQKSEPEVYTDTVITALCANLFGAGTETTSTTTEWAMSLLLNHREALKKAQAEIDAAVGTSRLVTADDVPHLTYLQCIVDETLRLHPAAPLLLPHESAADCTVGGYDVPRGTMLLVNVHAVHRDPAVWEDPDRFVPERFEGAGGKAEGRLLMPFGMGRRKCPGETLALRTVGLVLATLLQCFDWDTVDGAQVDMKASGGLTMPRAVPLEAMCRPRTAMRGVLKRL
Source: Genetic information comes from the article