Gene Details:
- Gene ID: Zm00001eb332550
- Gene Symbol: CycZmG1 cycZme1 cyc5
- Gene Name: cyclin5
- Genome: Zm-B73-REFERENCE-NAM-5.0
- Species: Zea mays
Functional Descriptions:
- Cyclins are the regulatory subunits of cyclin-dependent protein kinases. In investigations of the expression of a cyclin gene during maize endosperm development.
- The alternatively spliced transcript was unable to promote maturation. In addition to maize endosperm, the alternatively spliced cyclin was detected in apical meristem, mature leaf, root tip and mature root.
- These data show that deletion of 21 amino acids inside the cyclin box by alternative splicing, created a nonfunctional variant, CycZme3, that was not able to promote maturation.
Function-related keywords:
- leaf , root , development , leaf-development , root-development , meristem , endosperm , root-apical-meristem , endosperm-development , root-meristem
Literature:
- Alternative splicing of cyclin transcripts in maize endosperm. DOI: 10.1016/s0378-1119(97)00133-9 ; PMID: 9305761
Related News:
Gene Resources:
- NCBI ID: LOC542345
- UniProt accessions: A0A804QI55
Sequences:
cDNA Sequence
- >Zm00001eb332550_T002
CACGCTAGTAGAAATCCCTCCAAACCCAACGCCTACAATTACAAAGATACACCGCCTCCCGCTTCCTTCTCCGCCATACCTCGTGTCCGACGAGCCCTAGGGAACGCGAGACCGGCCGTCGGCGAGAGAAGGACTCGAATGGAGTGCGCAAGGGAGTTGCGGGTTCGCTCCACGTTTACGGCGGCGGCCATGGCGTCCAAGAAGCAGGTGGGGCCTGGAGGCGCGGTTCCCGCTCAGGAACAGATGAACGGCGGCGATGCCGCCAGACTGGTCAGGAAGCCAATGGATACATTTCCACAGCCAGCGGCGGCAAGAGGCCGTAGGGCACTTGTCGACGTTGGCAATCTTATGAATGGCCGGCCTTCTCTTGTGAACCATCAGAAGCAAGCGGTTGCGGCAGCGGCAACCAGTCATAAACCACTCAACGTCGGCAACAAGAAGCCACTTGTTCCTCAGGCAGCAGCAAGAGGCCTGCGACCCCTTGCCGACGTTACGAATCTTATGATCAAAGACCGTGCTGCTCCTGCAAATCGTCAGAAGCCTGTGGATGCTGTGTTTAACAGGAACGGGAAGGCAGTAAAGCTGAAGGAATGCAAGGTGAAGCCTGAAGTCATTGTGATCATTCCAGATTCCGAGAAGGAGAAGAAAGGCAAATTCCCTGGAGGTCAGAGAGTCTGTAGGAGGGTGCCAACACTTTTTGACAATTTGACAAAATGCAGCAGGGCCTCTGATGGGATTACCACCCCGAAGAAGAAGGATCCATATGACATTGATGCACCTGATTCTTGCAATGAGCTGGCAGTCGTTGAATATGTTGAGGACATTTACAGATTCTACAAGAGCACTGAGGGCACCTGCCTTCCTCTCAGCAGCTACATGAGCTCACAGGCTGAAATCAGTGAGAGAATGAGAGCTATCCTTATCGACTGGATTATCGAGGTACAGTACAGGCTTACTCTAATGCCAGAGACACTTTACTTGACCGTCTACATCATCGACCAGTACTTATCCATGGAGAGTGTACCAAGAAAGGAGCTACAGCTCGTCGGCATAAGTGCCATGCTGATAGCAAGCAAGTACGAAGAGATATGGGCTCCACTGGTTAAGGACTTGATGTGCCTCTGTGACAACGCATTTACCAGAGACCAGATTCTGACCAAGGAAAAGGCCATCCTGGACATGCTCCATTGGAACCTGACGGTTCCAACAATGTACATGTTCATTGTTAGGTACCTGAAAGCCGCAATGTGTGACACAGAGCTTGAGAACATGACATTCTTCTACTCCGAGCTGGCATTGGTCCAGTACGCGATGCTGGTTTACCCTCCATCGGTGACCGCAGCCGCTGCCGTCTATGCTGCCAGGTCTACACTTGGGATGAATCCACAGTGGACTGATATTCTGGAACATCACACTGGCCTAGCTGAGCCACAGTTACTGGACTGCGCTAGGCGGCTGATCAGCTTCCATGCCCTGGCTCCGGAAAGCAAGCAAAAGGCGGTGTACAGGAAATACTCCAAGCCCAAGCTCGGCTCCGTCGCGCTTCAATCCCCTGACAAGAAGCTTTTGTCAGGTTGAGGCTCGCTGCTGCTCATTGTATTGTATATCATCGCTTCGATGGTACCATTTGTTTGGGTCGTGTGCTCTTTGCTTTTCTACTGAAGCAGAGCATGTGTTGGTTAGTCAGTTTGCTTAAACGACTACTGAAGCAGAGCCTTGTATGTGTGTTGGGAGAATGTGATATGTGATGTCAAGCTCAAACTTCTTCTCATCATTGGATAAACTACTTGTTGGCGTGGCATTGCCGCTCGTCATGTGGCACTACTGCGCCCC - >Zm00001eb332550_T001
CACGCTAGTAGAAATCCCTCCAAACCCAACGCCTACAATTACAAAGATACACCGCCTCCCGCTTCCTTCTCCGCCATACCTCGTGTCCGACGAGCCCTAGGGAACGCGAGACCGGCCGTCGGCGAGAGAAGGACTCGAATGGAGTGCGCAAGGGAGTTGCGGGTTCGCTCCACGTTTACGGCGGCGGCCATGGCGTCCAAGAAGCAGGTGGGGCCTGGAGGCGCGGTTCCCGCTCAGGAACAGATGAACGGCGGCGATGCCGCCAGACTGGTCAGGAAGCCAATGGATACATTTCCACAGCCAGCGGCGGCAAGAGGCCGTAGGGCACTTGTCGACGTTGGCAATCTTATGAATGGCCGGCCTTCTCTTGTGAACCATCAGAAGCAAGCGGTTGCGGCAGCGGCAACCAGTCATAAACCACTCAACGTCGGCAACAAGAAGCCACTTGTTCCTCAGGCAGCAGCAAGAGGCCTGCGACCCCTTGCCGACGTTACGAATCTTATGATCAAAGACCGTGCTGCTCCTGCAAATCGTCAGAAGCCTGTGGATGCTGTGTTTAACAGGAACGGGAAGGCAGTAAAGCTGAAGGAATGCAAGGTGAAGCCTGAAGTCATTGTGATCATTCCAGATTCCGAGAAGGAGAAGAAAGGCAAATTCCCTGGAGGTCAGAGAGTCTGTAGGAGGGTGCCAACACTTTTTGACAATTTGACAAAATGCAGCAGGGCCTCTGATGGGATTACCACCCCGAAGAAGAAGGATCCATATGACATTGATGCACCTGATTCTTGCAATGAGCTGGCAGTCGTTGAATATGTTGAGGACATTTACAGATTCTACAAGAGCACTGAGGGCACCTGCCTTCCTCTCAGCAGCTACATGAGCTCACAGGCTGAAATCAGTGAGAGAATGAGAGCTATCCTTATCGACTGGATTATCGAGGTACAGTACAGGCTTACTCTAATGCCAGAGACACTTTACTTGACCGTCTACATCATCGACCAGTACTTATCCATGGAGAGTGTACCAAGAAAGGAGCTACAGCTCGTCGGCATAAGTGCCATGCTGATAGCAAGCAAGTACGAAGAGATATGGGCTCCACTGGTTAAGGACTTGATGTGCCTCTGTGACAACGCATTTACCAGAGACCAGATTCTGACCAAGGAAAAGGCCATCCTGGACATGCTCCATTGGAACCTGACGGTTCCAACAATGTACATGTTCATTGTTAGGTACCTGAAAGCCGCAATGTGTGACACAGAGCTTGAGAACATGACATTCTTCTACTCCGAGCTGGCATTGGTCCAGTACGCGATGCTGGTTTACCCTCCATCGGTGACCGCAGCCGCTGCCGTCTATGCTGCCAGGTCTACACTTGGGATGAATCCACAGTGGACTGATATTCTGGAACATCACACTGGCCTAGCTGAGCCACAGTTACTGGACTGCGCTAGGCGGCTGATCAGCTTCCATGCCCTGGCTCCGGAAAGCAAGCAAAAGGCGGTGTACAGGAAATACTCCAAGCCCAAGCTCGGCTCCGTCGCGCTTCAATCCCCTGACAAGAAGCTTTTGTCAGGTTGAGGCTCGCTGCTGCTCATTGTATTGTATATCATCGCTTCGATGGTACCATTTGTTTGGGTCGTGTGCTCTTTGCTTTTCTACTGAAGCAGAGCATGTGTTGGTTAGTCAGTTTGCTTAAACGACTACTGAAGCAGAGCCTTGTATGTGTGTTGGGAGAATGTGATATGTGATGTCAAGCTCAAACTTCTTCTCATCATTGGATAAACTACTTGTTGGCGTGGCATTGCCGCTCGTCATGTGGCACTACTGCGCCCC
CDS Sequence
- >Zm00001eb332550_T002
ATGGAGTGCGCAAGGGAGTTGCGGGTTCGCTCCACGTTTACGGCGGCGGCCATGGCGTCCAAGAAGCAGGTGGGGCCTGGAGGCGCGGTTCCCGCTCAGGAACAGATGAACGGCGGCGATGCCGCCAGACTGGTCAGGAAGCCAATGGATACATTTCCACAGCCAGCGGCGGCAAGAGGCCGTAGGGCACTTGTCGACGTTGGCAATCTTATGAATGGCCGGCCTTCTCTTGTGAACCATCAGAAGCAAGCGGTTGCGGCAGCGGCAACCAGTCATAAACCACTCAACGTCGGCAACAAGAAGCCACTTGTTCCTCAGGCAGCAGCAAGAGGCCTGCGACCCCTTGCCGACGTTACGAATCTTATGATCAAAGACCGTGCTGCTCCTGCAAATCGTCAGAAGCCTGTGGATGCTGTGTTTAACAGGAACGGGAAGGCAGTAAAGCTGAAGGAATGCAAGGTGAAGCCTGAAGTCATTGTGATCATTCCAGATTCCGAGAAGGAGAAGAAAGGCAAATTCCCTGGAGGTCAGAGAGTCTGTAGGAGGGTGCCAACACTTTTTGACAATTTGACAAAATGCAGCAGGGCCTCTGATGGGATTACCACCCCGAAGAAGAAGGATCCATATGACATTGATGCACCTGATTCTTGCAATGAGCTGGCAGTCGTTGAATATGTTGAGGACATTTACAGATTCTACAAGAGCACTGAGGGCACCTGCCTTCCTCTCAGCAGCTACATGAGCTCACAGGCTGAAATCAGTGAGAGAATGAGAGCTATCCTTATCGACTGGATTATCGAGGTACAGTACAGGCTTACTCTAATGCCAGAGACACTTTACTTGACCGTCTACATCATCGACCAGTACTTATCCATGGAGAGTGTACCAAGAAAGGAGCTACAGCTCGTCGGCATAAGTGCCATGCTGATAGCAAGCAAGTACGAAGAGATATGGGCTCCACTGGTTAAGGACTTGATGTGCCTCTGTGACAACGCATTTACCAGAGACCAGATTCTGACCAAGGAAAAGGCCATCCTGGACATGCTCCATTGGAACCTGACGGTTCCAACAATGTACATGTTCATTGTTAGGTACCTGAAAGCCGCAATGTGTGACACAGAGCTTGAGAACATGACATTCTTCTACTCCGAGCTGGCATTGGTCCAGTACGCGATGCTGGTTTACCCTCCATCGGTGACCGCAGCCGCTGCCGTCTATGCTGCCAGGTCTACACTTGGGATGAATCCACAGTGGACTGATATTCTGGAACATCACACTGGCCTAGCTGAGCCACAGTTACTGGACTGCGCTAGGCGGCTGATCAGCTTCCATGCCCTGGCTCCGGAAAGCAAGCAAAAGGCGGTGTACAGGAAATACTCCAAGCCCAAGCTCGGCTCCGTCGCGCTTCAATCCCCTGACAAGAAGCTTTTGTCAGGTTGA - >Zm00001eb332550_T001
ATGGAGTGCGCAAGGGAGTTGCGGGTTCGCTCCACGTTTACGGCGGCGGCCATGGCGTCCAAGAAGCAGGTGGGGCCTGGAGGCGCGGTTCCCGCTCAGGAACAGATGAACGGCGGCGATGCCGCCAGACTGGTCAGGAAGCCAATGGATACATTTCCACAGCCAGCGGCGGCAAGAGGCCGTAGGGCACTTGTCGACGTTGGCAATCTTATGAATGGCCGGCCTTCTCTTGTGAACCATCAGAAGCAAGCGGTTGCGGCAGCGGCAACCAGTCATAAACCACTCAACGTCGGCAACAAGAAGCCACTTGTTCCTCAGGCAGCAGCAAGAGGCCTGCGACCCCTTGCCGACGTTACGAATCTTATGATCAAAGACCGTGCTGCTCCTGCAAATCGTCAGAAGCCTGTGGATGCTGTGTTTAACAGGAACGGGAAGGCAGTAAAGCTGAAGGAATGCAAGGTGAAGCCTGAAGTCATTGTGATCATTCCAGATTCCGAGAAGGAGAAGAAAGGCAAATTCCCTGGAGGTCAGAGAGTCTGTAGGAGGGTGCCAACACTTTTTGACAATTTGACAAAATGCAGCAGGGCCTCTGATGGGATTACCACCCCGAAGAAGAAGGATCCATATGACATTGATGCACCTGATTCTTGCAATGAGCTGGCAGTCGTTGAATATGTTGAGGACATTTACAGATTCTACAAGAGCACTGAGGGCACCTGCCTTCCTCTCAGCAGCTACATGAGCTCACAGGCTGAAATCAGTGAGAGAATGAGAGCTATCCTTATCGACTGGATTATCGAGGTACAGTACAGGCTTACTCTAATGCCAGAGACACTTTACTTGACCGTCTACATCATCGACCAGTACTTATCCATGGAGAGTGTACCAAGAAAGGAGCTACAGCTCGTCGGCATAAGTGCCATGCTGATAGCAAGCAAGTACGAAGAGATATGGGCTCCACTGGTTAAGGACTTGATGTGCCTCTGTGACAACGCATTTACCAGAGACCAGATTCTGACCAAGGAAAAGGCCATCCTGGACATGCTCCATTGGAACCTGACGGTTCCAACAATGTACATGTTCATTGTTAGGTACCTGAAAGCCGCAATGTGTGACACAGAGCTTGAGAACATGACATTCTTCTACTCCGAGCTGGCATTGGTCCAGTACGCGATGCTGGTTTACCCTCCATCGGTGACCGCAGCCGCTGCCGTCTATGCTGCCAGGTCTACACTTGGGATGAATCCACAGTGGACTGATATTCTGGAACATCACACTGGCCTAGCTGAGCCACAGTTACTGGACTGCGCTAGGCGGCTGATCAGCTTCCATGCCCTGGCTCCGGAAAGCAAGCAAAAGGCGGTGTACAGGAAATACTCCAAGCCCAAGCTCGGCTCCGTCGCGCTTCAATCCCCTGACAAGAAGCTTTTGTCAGGTTGA
Protein Sequence
- >Zm00001eb332550_P002
MECARELRVRSTFTAAAMASKKQVGPGGAVPAQEQMNGGDAARLVRKPMDTFPQPAAARGRRALVDVGNLMNGRPSLVNHQKQAVAAAATSHKPLNVGNKKPLVPQAAARGLRPLADVTNLMIKDRAAPANRQKPVDAVFNRNGKAVKLKECKVKPEVIVIIPDSEKEKKGKFPGGQRVCRRVPTLFDNLTKCSRASDGITTPKKKDPYDIDAPDSCNELAVVEYVEDIYRFYKSTEGTCLPLSSYMSSQAEISERMRAILIDWIIEVQYRLTLMPETLYLTVYIIDQYLSMESVPRKELQLVGISAMLIASKYEEIWAPLVKDLMCLCDNAFTRDQILTKEKAILDMLHWNLTVPTMYMFIVRYLKAAMCDTELENMTFFYSELALVQYAMLVYPPSVTAAAAVYAARSTLGMNPQWTDILEHHTGLAEPQLLDCARRLISFHALAPESKQKAVYRKYSKPKLGSVALQSPDKKLLSG - >Zm00001eb332550_P001
MECARELRVRSTFTAAAMASKKQVGPGGAVPAQEQMNGGDAARLVRKPMDTFPQPAAARGRRALVDVGNLMNGRPSLVNHQKQAVAAAATSHKPLNVGNKKPLVPQAAARGLRPLADVTNLMIKDRAAPANRQKPVDAVFNRNGKAVKLKECKVKPEVIVIIPDSEKEKKGKFPGGQRVCRRVPTLFDNLTKCSRASDGITTPKKKDPYDIDAPDSCNELAVVEYVEDIYRFYKSTEGTCLPLSSYMSSQAEISERMRAILIDWIIEVQYRLTLMPETLYLTVYIIDQYLSMESVPRKELQLVGISAMLIASKYEEIWAPLVKDLMCLCDNAFTRDQILTKEKAILDMLHWNLTVPTMYMFIVRYLKAAMCDTELENMTFFYSELALVQYAMLVYPPSVTAAAAVYAARSTLGMNPQWTDILEHHTGLAEPQLLDCARRLISFHALAPESKQKAVYRKYSKPKLGSVALQSPDKKLLSG
Source: Genetic information comes from the article