Gene Details:
- Gene ID: Zm00001eb360490
- Gene Symbol: Clt1
- Gene Name: clumped tassel1
- Genome: Zm-B73-REFERENCE-NAM-5.0
- Species: Zea mays
Functional Descriptions:
- The BTB (brica-brac, tramtrack, and broad) domain-containing protein Clt1 regulates melanin and toxin synthesis, conidiation, and pathogenicity in Curvularia lunata, but the interacting proteins and regulative mechanism of Clt1 are unclear.
- The Role of Clt1-Regulated Xylan Metabolism in Melanin and Toxin Formation for the Pathogenicity of Curvularia lunata in Maize.
- In this research, we identified two proteins, which respectively correspond to xylanase (Clxyn24) and acetyl xylan esterase (Claxe43) from C. lunata, that were regulated by Clt1.
- Clt1 regulates maize plant height.
- Dominant Clt1 plants have variable dwarfing, developmental anomalies.
Function-related keywords:
Literature:
- The Role of Clt1-Regulated Xylan Metabolism in Melanin and Toxin Formation for the Pathogenicity of Curvularia lunata in Maize. DOI: 10.1094/MPMI-08-20-0235-R ; PMID: 33417477
- Integration of high-throughput phenotyping, GWAS, and predictive models reveals the genetic architecture of plant height in maize. DOI: 10.1016/j.molp.2022.11.016 ; PMID: 36447436
Related News:
Gene Resources:
- NCBI ID: LOC100382477
- UniProt accessions: C0P882
Sequences:
cDNA Sequence
- >Zm00001eb360490_T001
GTGGACCTTTGTTTATAAGAGTGGGCCCTTGAATATTGACAGCGGCCGCTCGAGCGTCATTGACAAAAGGTTTCGCCAGCGCCGAGCCTCATCATCAGCCACCCGTCCACCACCACCCAGCCCATTTCTCGTCCCCAAAATTTCGAGTTTCGAAACCAAACCAAACGAAGCGACACTGCACGTGTACGAACCTACGACAGCTCTCTACTTCCCTCGCGTCCTCTCCATCGAGAGCTGCTCCTGCTCGTCTCCTCCCACACCGCGCAATTCGTCGGGATTCGGGAACCCTAGCGCCGGATCTCCGCGGCAGCGGCGGAAATGGCGAATCCCCTAGCGGGGCTGCAGGACCACCTCAAGCTCGCGCGGGACTACGCGCTCGAGGGCCTCTACGACACCTCCATCATCTTCTTCGACGGCGCCATCGCCCAGATCAACAAGCATCTAACTACTTTGGACGATGCTCTGATTCGTACGAAATGGATGAACTGCAAGAAAGCAATCTCTGAAGAAGTGGAAATTGTGAAACAGTTGGATGCTCAATTAAAGTCCCTTAAAGAAGCTCCTGGGACAAGGCGGTCATCATCACCTCCTATTCGGTCTAATAAATCATTTGTTTTCCAACCGTTGGATGAGTATCCAACATCTTCACCAGCACCCTTTGATGATCCTGATGTGTGGGCTCCACCAAGGGATACACCAACCCGAAGACCAACAAGAGGTCAATCTAGTGCAAGGAAGTCCTCCCAAGATGGAGCCTGGGCACGTGGTTCATCAAGGACTGGAACACCTAGTCGAAGCGCAAAACCTAATGGGATTAAAGGAGGTGCTGTTAAATCAACTGCCTCTAACAGTTCTGTAAGGAAAGGGAAACAAAGTTCAAACAAGGCTGATTCAACGAGTAGTGATGCTGAGGAAGGTAAGTCCAAGAAGGGTCAGTATGAAGGGCCAGATATGGACTTAGCTGCAATGCTTGAAAGGGATGTTCTGGATTCTACTCCAGGAGTAAGATGGGATGATGTTGCCGGACTTAGTGAGGCCAAACGACTCCTCGAGGAAGCAGTTGTGCTTCCTCTCTGGATGCCTGAATATTTTCAGGGTATTCGTCGACCTTGGAAAGGAGTTCTTATGTTTGGTCCACCAGGCACGGGAAAGACTCTTTTGGCAAAGGCAGTGGCCACCGAATGTGGAACAACATTCTTTAATGTTTCCTCTGCAACACTGGCCTCTAAATGGCGTGGCGAGAGTGAGCGCATGGTCCGTTGCTTATTTGATCTTGCGAGGGCCTATGCTCCAAGTACAATTTTCATTGATGAAATTGACTCCTTATGCACGTCGCGCGGTGCCTCCGGCGAACATGAGTCGTCAAGAAGGGTGAAGTCTGAACTTCTAGTGCAAATTGATGGTGTAAACAATAGCTCCACCACTGATGATGGCCAGCCAAAAATTGTTATGGTTCTGGCTGCTACAAATTTTCCATGGGATATTGATGAGGCACTGAGGCGGAGGCTGGAGAAGCGTATTTATATTCCACTTCCAGATTTTGAAAGTAGAAAGGCACTTATCAACATTAATCTTAGAACAGTTCAGATAGCCGCAGATGTTAACATCGACGAGGTTGCTCGGAGGACAGAAGGCTATAGTGGAGATGATCTGACAAACGTTTGCCGCGATGCCTCAATGAATGGCATGAGGCGCAAGATAGCAGGCAAGACCCGCGACGAGATCAAGAACATGTCAAAGGACGAGATAGCCAAGGACCCGGTGGCCATGTGCGACTTTGTGGAGGCTCTGGTGAAGGTTCAGAAGAGTGTCTCGCCTTCAGACATAGAGAAGCATGAGAAGTGGATGGCTGAGTTTGGGTCTGCCTGAGACCTCGGCCATCTGCTTGGGTCCTGTTCAAACATTCGTTTTGTGTGGGTTGACACGGCATTCCGTAGCAATGATACGGTGTTACCCGCCGGTGGTCTTGCTTCATATAGACCAGAGGCACGAGCTATCTTGTCTGTTTCCAGTGATGCTAGGAATTGAGTTCACGATCGTTTCAGTTCTTGGTATATGCACTTTCTGCTGTCAAACGTATCTCATCAAGTAGCCGTGGCCGCCTCTATTTCCAGATGCTCCGTGTTTGGTTGAAGGAATATCACAGGAACC - >Zm00001eb360490_T002
GTGGACCTTTGTTTATAAGAGTGGGCCCTTGAATATTGACAGCGGCCGCTCGAGCGTCATTGACAAAAGGTTTCGCCAGCGCCGAGCCTCATCATCAGCCACCCGTCCACCACCACCCAGCCCATTTCTCGTCCCCAAAATTTCGAGTTTCGAAACCAAACCAAACGAAGCGACACTGCACGTGTACGAACCTACGACAGCTCTCTACTTCCCTCGCGTCCTCTCCATCGAGAGCTGCTCCTGCTCGTCTCCTCCCACACCGCGCAATTCGTCGGGATTCGGGAACCCTAGCGCCGGATCTCCGCGGCAGCGGCGGAAATGGCGAATCCCCTAGCGGGGCTGCAGGACCACCTCAAGCTCGCGCGGGACTACGCGCTCGAGGGCCTCTACGACACCTCCATCATCTTCTTCGACGGCGCCATCGCCCAGATCAACAAGCATCTAACTACTTTGGACGATGCTCTGATTCGTACGAAATGGATGAACTGCAAGAAAGCAATCTCTGAAGAAGTGGAAATTGTGAAACAGTTGGATGCTCAATTAAAGTCCCTTAAAGAAGCTCCTGGGACAAGGCGGTCATCATCACCTCCTATTCGGTCTAATAAATCATTTGTTTTCCAACCGTTGGATGAGTATCCAACATCTTCACCAGCACCCTTTGATGATCCTGATGTGTGGGCTCCACCAAGGGATACACCAACCCGAAGACCAACAAGAGGTCAATCTAGTGCAAGGAAGTCCTCCCAAGATGGAGCCTGGGCACGTGGTTCATCAAGGACTGGAACACCTAGTCGAAGCGCAAAACCTAATGGGATTAAAGGAGGTGCTGTTAAATCAACTGCCTCTAACAGTTCTGTAAGGAAAGGGAAACAAAGTTCAAACAAGGCTGATTCAACGAGTAGTGATGCTGAGGAAGGTAAGTCCAAGAAGGGTCAGTATGAAGGGCCAGATATGGACTTAGCTGCAATGCTTGAAAGGGATGTTCTGGATTCTACTCCAGGAGTAAGATGGGATGATGTTGCCGGACTTAGTGAGGCCAAACGACTCCTCGAGGAAGCAGTTGTGCTTCCTCTCTGGATGCCTGAATATTTTCAGGGTATTCGTCGACCTTGGAAAGGAGTTCTTATGTTTGGTCCACCAGGCACGGGAAAGACTCTTTTGGCAAAGGCAGTGGCCACCGAATGTGGAACAACATTCTTTAATGTTTCCTCTGCAACACTGGCCTCTAAATGGCGTGGCGAGAGTGAGCGCATGGTCCGTTGCTTATTTGATCTTGCGAGGGCCTATGCTCCAAGTACAATTTTCATTGATGAAATTGACTCCTTATGCACGTCGCGCGGTGCCTCCGGCGAACATGAGTCGTCAAGAAGGGTGAAGTCTGAACTTCTAGTGCAAATTGATGGTGTAAACAATAGCTCCACCACTGATGATGGCCAGCCAAAAATTGTTATGGTTCTGGCTGCTACAAATTTTCCATGGGATATTGATGAGGCACTGAGGCGGAGGCTGGAGAAGCGTATTTATATTCCACTTCCAGATTTTGAAAGTAGAAAGGCACTTATCAACATTAATCTTAGAACAGTTCAGATAGCCGCAGATGTTAACATCGACGAGGTTGCTCGGAGGACAGAAGGCTATAGTGGAGATGATCTGACAAACGTTTGCCGCGATGCCTCAATGAATGGCATGAGGCGCAAGATAGCAGGCAAGACCCGCGACGAGATCAAGAACATGTCAAAGGACGAGATAGCCAAGGACCCGGTGGCCATGTGCGACTTTGTGGAGGCTCTGGTGAAGGTTCAGAAGAGTGTCTCGCCTTCAGACATAGAGAAGCATGAGAAGTGGATGGCTGAGTTTGGGTCTGCCTGAGACCTCGGCCATCTGCTTGGGTCCTGTTCAAACATTCGTTTTGTGTGGGTTGACACGGCATTCCGTAGCAATGATACGGTGTTACCCGCCGGTGGTCTTGCTTCATATAGACCAGAGGCACGAGCTATCTTGTCTGTTTCCAGTGATGCTAGGAATTGAGTTCACGATCGTTTCAGTTCTTGGTATATGCACTTTCTGCTGTCAAACGTATCTCATCAAGTAGCCGTGGCCGCCTCTATTTCCAGATGCTCCGTGTTTGGTTGAAGGAATATCACAGGAACC
CDS Sequence
- >Zm00001eb360490_T001
ATGGCGAATCCCCTAGCGGGGCTGCAGGACCACCTCAAGCTCGCGCGGGACTACGCGCTCGAGGGCCTCTACGACACCTCCATCATCTTCTTCGACGGCGCCATCGCCCAGATCAACAAGCATCTAACTACTTTGGACGATGCTCTGATTCGTACGAAATGGATGAACTGCAAGAAAGCAATCTCTGAAGAAGTGGAAATTGTGAAACAGTTGGATGCTCAATTAAAGTCCCTTAAAGAAGCTCCTGGGACAAGGCGGTCATCATCACCTCCTATTCGGTCTAATAAATCATTTGTTTTCCAACCGTTGGATGAGTATCCAACATCTTCACCAGCACCCTTTGATGATCCTGATGTGTGGGCTCCACCAAGGGATACACCAACCCGAAGACCAACAAGAGGTCAATCTAGTGCAAGGAAGTCCTCCCAAGATGGAGCCTGGGCACGTGGTTCATCAAGGACTGGAACACCTAGTCGAAGCGCAAAACCTAATGGGATTAAAGGAGGTGCTGTTAAATCAACTGCCTCTAACAGTTCTGTAAGGAAAGGGAAACAAAGTTCAAACAAGGCTGATTCAACGAGTAGTGATGCTGAGGAAGGTAAGTCCAAGAAGGGTCAGTATGAAGGGCCAGATATGGACTTAGCTGCAATGCTTGAAAGGGATGTTCTGGATTCTACTCCAGGAGTAAGATGGGATGATGTTGCCGGACTTAGTGAGGCCAAACGACTCCTCGAGGAAGCAGTTGTGCTTCCTCTCTGGATGCCTGAATATTTTCAGGGTATTCGTCGACCTTGGAAAGGAGTTCTTATGTTTGGTCCACCAGGCACGGGAAAGACTCTTTTGGCAAAGGCAGTGGCCACCGAATGTGGAACAACATTCTTTAATGTTTCCTCTGCAACACTGGCCTCTAAATGGCGTGGCGAGAGTGAGCGCATGGTCCGTTGCTTATTTGATCTTGCGAGGGCCTATGCTCCAAGTACAATTTTCATTGATGAAATTGACTCCTTATGCACGTCGCGCGGTGCCTCCGGCGAACATGAGTCGTCAAGAAGGGTGAAGTCTGAACTTCTAGTGCAAATTGATGGTGTAAACAATAGCTCCACCACTGATGATGGCCAGCCAAAAATTGTTATGGTTCTGGCTGCTACAAATTTTCCATGGGATATTGATGAGGCACTGAGGCGGAGGCTGGAGAAGCGTATTTATATTCCACTTCCAGATTTTGAAAGTAGAAAGGCACTTATCAACATTAATCTTAGAACAGTTCAGATAGCCGCAGATGTTAACATCGACGAGGTTGCTCGGAGGACAGAAGGCTATAGTGGAGATGATCTGACAAACGTTTGCCGCGATGCCTCAATGAATGGCATGAGGCGCAAGATAGCAGGCAAGACCCGCGACGAGATCAAGAACATGTCAAAGGACGAGATAGCCAAGGACCCGGTGGCCATGTGCGACTTTGTGGAGGCTCTGGTGAAGGTTCAGAAGAGTGTCTCGCCTTCAGACATAGAGAAGCATGAGAAGTGGATGGCTGAGTTTGGGTCTGCCTGA - >Zm00001eb360490_T002
ATGGCGAATCCCCTAGCGGGGCTGCAGGACCACCTCAAGCTCGCGCGGGACTACGCGCTCGAGGGCCTCTACGACACCTCCATCATCTTCTTCGACGGCGCCATCGCCCAGATCAACAAGCATCTAACTACTTTGGACGATGCTCTGATTCGTACGAAATGGATGAACTGCAAGAAAGCAATCTCTGAAGAAGTGGAAATTGTGAAACAGTTGGATGCTCAATTAAAGTCCCTTAAAGAAGCTCCTGGGACAAGGCGGTCATCATCACCTCCTATTCGGTCTAATAAATCATTTGTTTTCCAACCGTTGGATGAGTATCCAACATCTTCACCAGCACCCTTTGATGATCCTGATGTGTGGGCTCCACCAAGGGATACACCAACCCGAAGACCAACAAGAGGTCAATCTAGTGCAAGGAAGTCCTCCCAAGATGGAGCCTGGGCACGTGGTTCATCAAGGACTGGAACACCTAGTCGAAGCGCAAAACCTAATGGGATTAAAGGAGGTGCTGTTAAATCAACTGCCTCTAACAGTTCTGTAAGGAAAGGGAAACAAAGTTCAAACAAGGCTGATTCAACGAGTAGTGATGCTGAGGAAGGTAAGTCCAAGAAGGGTCAGTATGAAGGGCCAGATATGGACTTAGCTGCAATGCTTGAAAGGGATGTTCTGGATTCTACTCCAGGAGTAAGATGGGATGATGTTGCCGGACTTAGTGAGGCCAAACGACTCCTCGAGGAAGCAGTTGTGCTTCCTCTCTGGATGCCTGAATATTTTCAGGGTATTCGTCGACCTTGGAAAGGAGTTCTTATGTTTGGTCCACCAGGCACGGGAAAGACTCTTTTGGCAAAGGCAGTGGCCACCGAATGTGGAACAACATTCTTTAATGTTTCCTCTGCAACACTGGCCTCTAAATGGCGTGGCGAGAGTGAGCGCATGGTCCGTTGCTTATTTGATCTTGCGAGGGCCTATGCTCCAAGTACAATTTTCATTGATGAAATTGACTCCTTATGCACGTCGCGCGGTGCCTCCGGCGAACATGAGTCGTCAAGAAGGGTGAAGTCTGAACTTCTAGTGCAAATTGATGGTGTAAACAATAGCTCCACCACTGATGATGGCCAGCCAAAAATTGTTATGGTTCTGGCTGCTACAAATTTTCCATGGGATATTGATGAGGCACTGAGGCGGAGGCTGGAGAAGCGTATTTATATTCCACTTCCAGATTTTGAAAGTAGAAAGGCACTTATCAACATTAATCTTAGAACAGTTCAGATAGCCGCAGATGTTAACATCGACGAGGTTGCTCGGAGGACAGAAGGCTATAGTGGAGATGATCTGACAAACGTTTGCCGCGATGCCTCAATGAATGGCATGAGGCGCAAGATAGCAGGCAAGACCCGCGACGAGATCAAGAACATGTCAAAGGACGAGATAGCCAAGGACCCGGTGGCCATGTGCGACTTTGTGGAGGCTCTGGTGAAGGTTCAGAAGAGTGTCTCGCCTTCAGACATAGAGAAGCATGAGAAGTGGATGGCTGAGTTTGGGTCTGCCTGA
Protein Sequence
- >Zm00001eb360490_P001
MANPLAGLQDHLKLARDYALEGLYDTSIIFFDGAIAQINKHLTTLDDALIRTKWMNCKKAISEEVEIVKQLDAQLKSLKEAPGTRRSSSPPIRSNKSFVFQPLDEYPTSSPAPFDDPDVWAPPRDTPTRRPTRGQSSARKSSQDGAWARGSSRTGTPSRSAKPNGIKGGAVKSTASNSSVRKGKQSSNKADSTSSDAEEGKSKKGQYEGPDMDLAAMLERDVLDSTPGVRWDDVAGLSEAKRLLEEAVVLPLWMPEYFQGIRRPWKGVLMFGPPGTGKTLLAKAVATECGTTFFNVSSATLASKWRGESERMVRCLFDLARAYAPSTIFIDEIDSLCTSRGASGEHESSRRVKSELLVQIDGVNNSSTTDDGQPKIVMVLAATNFPWDIDEALRRRLEKRIYIPLPDFESRKALININLRTVQIAADVNIDEVARRTEGYSGDDLTNVCRDASMNGMRRKIAGKTRDEIKNMSKDEIAKDPVAMCDFVEALVKVQKSVSPSDIEKHEKWMAEFGSA - >Zm00001eb360490_P002
MANPLAGLQDHLKLARDYALEGLYDTSIIFFDGAIAQINKHLTTLDDALIRTKWMNCKKAISEEVEIVKQLDAQLKSLKEAPGTRRSSSPPIRSNKSFVFQPLDEYPTSSPAPFDDPDVWAPPRDTPTRRPTRGQSSARKSSQDGAWARGSSRTGTPSRSAKPNGIKGGAVKSTASNSSVRKGKQSSNKADSTSSDAEEGKSKKGQYEGPDMDLAAMLERDVLDSTPGVRWDDVAGLSEAKRLLEEAVVLPLWMPEYFQGIRRPWKGVLMFGPPGTGKTLLAKAVATECGTTFFNVSSATLASKWRGESERMVRCLFDLARAYAPSTIFIDEIDSLCTSRGASGEHESSRRVKSELLVQIDGVNNSSTTDDGQPKIVMVLAATNFPWDIDEALRRRLEKRIYIPLPDFESRKALININLRTVQIAADVNIDEVARRTEGYSGDDLTNVCRDASMNGMRRKIAGKTRDEIKNMSKDEIAKDPVAMCDFVEALVKVQKSVSPSDIEKHEKWMAEFGSA
Source: Genetic information comes from the article