Gene Details:

Functional Descriptions:

  • Mutation of 4-coumarate: coenzyme A ligase 1 gene affects lignin biosynthesis and increases the cell wall digestibility in maize brown midrib5 mutants
  • The comprehensive effects of BM5 mutation on lignin biosynthesis.
  • BM5 encodes 4-coumarate-CoA ligase,mutants displayed lower levels of lignins and of p-coumarate esters, but increased levels of ferulate esters

Literature:

Gene Resources:

Sequences:

cDNA Sequence
  • >Zm00001eb233720_T001
    CACTCACCAACTCCCCAACTCCCTGTCCTCCCCTGCTCGTATATAACTCGGCACCAGCCGGTCCTCTGCCCTCCAGGAGATCAGAGCCCCGGCGAGGTCGCACCGCACCAGCCATCGTCTCCTTCCTTCCTTCCTATACTACCATCCAACCAGCTGCCCAGCGCAACGTTACCTGCCCGACATCCGACAAGCCAGTCCATCCGGCAGCGAGCAAAGGTCTGAGATGGGTTCCGTAGACGCGGCGATCGCGGTGCCGGTGCCGGCGGCGGAGGAGAAGGCGGTGGAGGAGAAGGCGGTGGTGTTCCGGTCCAAGCTCCCCGACATCGAGATCGACAGCAGCATGGCGCTGCACACCTACTGCTTCGGGAAGATGGGTGAGGTGGCGGAGCGGGCGTGCCTGGTCGACGGGCTGACGGGCGCGTCGTACACGTACGCGGAGGTGGAGTCCCTGTCCCGGCGCGCCGCGTCGGGGCTGCGCGCCATGGGGGTGGGCAAGGGCGACGTGGTGATGAGCCTGCTCCGCAACTGCCCCGAGTTCGCCTTCACCTTCCTGGGCGCCGCCCGCCTGGGCGCCGCCACCACCACGGCCAACCCGTTCTACACCCCGCACGAGGTGCGGGAGTTCGCGGCGGAGCGGGGCATCCCCGTGGTCACCGTCGACGGGCGCTTCGACGGCTGCGTGGAGTTCGCCGAGCTGATCGCGGCCGAGGAGCTGGAGGCCGACGCCGACATCCACCCCGACGACGTCGTCGCGCTGCCCTACTCCTCCGGCACCACCGGGCTGCCCAAGGGCGTCATGCTCACCCACCGCAGCCTCATCACCAGCGTCGCGCAGCAGGTTGATGGCGAGAACCCGAACCTGTACTTCCGCAAGGACGACGTGGTGCTGTGCCTGCTGCCGCTGTTCCACATCTACTCGCTGAACTCGGTGCTGCTGGCCGGCCTGCGCGCGGGCTCCACCATCGTGATCATGCGCAAGTTCGACCTGGGCGCGCTGGTGGACCTGGTGCGCAGGTACGTGATCACCATCGCGCCCTTCGTGCCGCCCATCGTGGTGGAGATCGCCAAGAGCCCCCGCGTGACCGCCGGCGACCTCGCGTCCATCCGCATGGTCATGTCCGGCGCCGCGCCCATGGGCAAGGAGCTCCAGGACGCCTTCATGGCCAAGATTCCCAATGCCGTGCTCGGGCAGGGGTACGGGATGACGGAGGCAGGCCCCGTGCTGGCGATGTGCCTGGCCTTCGCCAAGGAGCCGTACCCGGTCAAGTCCGGGTCGTGCGGCACCGTGGTGCGGAACGCGGAGCTGAAGATCGTCGACCCCGACACCGGCGCCGCCCTCGGCCGGAACCAGCCCGGCGAGATCTGCATCCGCGGGGAGCAGATCATGAAAGGTTACCTGAACGACCCCGAGTCGACGAAGAACACCATCGACAAGGACGGCTGGCTGCACACCGGAGACATCGGCTACGTGGACGACGACGACGAGATCTTCATCGTCGACAGGCTCAAGGAGATCATCAAGTACAAGGGCTTCCAGGTGCCGCCGGCGGAGCTGGAGGCGCTCCTCATCACGCACCCGGAGATCAAGGACGCCGCCGTCGTATCAATGAACGATGACCTTGCTGGTGAAATCCCGGTCGCCTTCATCGTGCGGACCGAAGGTTCTCAAGTCACCGAGGATGAGATCAAGCAATTCGTCGCCAAGGAGGTGGTTTTCTACAAGAAGATCCACAAGGTCTTCTTCACCGAATCCATCCCCAAGAACCCGTCGGGCAAGATCCTGAGGAAGGACTTGAGAGCCAGGCTCGCCGCCGGTGTTCACTGAGGCCCGTATGCAGCTTCTTCTCGGACGGCCACCACGCTGCTGCGAAAAAAAAGGCGATGTAATGGCGGTAACACTACTATTCATGAACTGGCAACAGAAGGGACACGTATTCCTGTGGAACACATGTTGCCAGAAAGAGGTTTTAGTTTGTCTGTTTGTTGGCCCTGTGTGTAATGTTCATAAACGATATAGACGTCGTCTCTATGTTGTTTTTGACCCAAAGAACAAGCCTGATTACGGCAATACAGCTACGGAGTACCGTGTTTCATATGCCTAGATGTTTGTCATAAGTTATTATAGCCGGAGATGGCGATGGGCCTCGATCTCTCCTTCACTAGGACTAGTTTGGCAACGAGGAGAGAAAAATCCCTTGAAAATTAATCTAGGAGGGGATTTTAGATGCCACCTTATTTCCCCCCTCTTCGGTGTACTTCTCTGACATTGTTTGAGAAGCAATGGGCTAAATACCTCTGTTGAGCAAAAATACATAAAAAAATCAGGAAAAATAAAAAATATATAAGAAATATTTAGAAAACTCACAAACAATAAAACATCACTAAAGATCCAAAAATATGAAGCACCTATGATTCACGCAAAGTTTAGGGTTTTGAATACCATCTAATATCAAACGAAGCTAATCCATCATCACATCACATAGTATCATCATCTCCATTCACACGTACAGGTAGACAATATAATATAAAAATGGAGTATTAGGAAGTTTGGCAGTAGAATAAGACATCTAAAATATGCACGCCACATGCCAACTTAATGCGTTTTAGTTTCATGCCAGCTTCCTTCTCCATGTC
  • >Zm00001eb233720_T002
    CACTCACCAACTCCCCAACTCCCTGTCCTCCCCTGCTCGTATATAACTCGGCACCAGCCGGTCCTCTGCCCTCCAGGAGATCAGAGCCCCGGCGAGGTCGCACCGCACCAGCCATCGTCTCCTTCCTTCCTTCCTATACTACCATCCAACCAGCTGCCCAGCGCAACGTTACCTGCCCGACATCCGACAAGCCAGTCCATCCGGCAGCGAGCAAAGGTCTGAGATGGGTTCCGTAGACGCGGCGATCGCGGTGCCGGTGCCGGCGGCGGAGGAGAAGGCGGTGGAGGAGAAGGCGGTGGTGTTCCGGTCCAAGCTCCCCGACATCGAGATCGACAGCAGCATGGCGCTGCACACCTACTGCTTCGGGAAGATGGGTGAGGTGGCGGAGCGGGCGTGCCTGGTCGACGGGCTGACGGGCGCGTCGTACACGTACGCGGAGGTGGAGTCCCTGTCCCGGCGCGCCGCGTCGGGGCTGCGCGCCATGGGGGTGGGCAAGGGCGACGTGGTGATGAGCCTGCTCCGCAACTGCCCCGAGTTCGCCTTCACCTTCCTGGGCGCCGCCCGCCTGGGCGCCGCCACCACCACGGCCAACCCGTTCTACACCCCGCACGAGGTGCGGGAGTTCGCGGCGGAGCGGGGCATCCCCGTGGTCACCGTCGACGGGCGCTTCGACGGCTGCGTGGAGTTCGCCGAGCTGATCGCGGCCGAGGAGCTGGAGGCCGACGCCGACATCCACCCCGACGACGTCGTCGCGCTGCCCTACTCCTCCGGCACCACCGGGCTGCCCAAGGGCGTCATGCTCACCCACCGCAGCCTCATCACCAGCGTCGCGCAGCAGGTTGATGGCGAGAACCCGAACCTGTACTTCCGCAAGGACGACGTGGTGCTGTGCCTGCTGCCGCTGTTCCACATCTACTCGCTGAACTCGGTGCTGCTGGCCGGCCTGCGCGCGGGCTCCACCATCGTGATCATGCGCAAGTTCGACCTGGGCGCGCTGGTGGACCTGGTGCGCAGGTACGTGATCACCATCGCGCCCTTCGTGCCGCCCATCGTGGTGGAGATCGCCAAGAGCCCCCGCGTGACCGCCGGCGACCTCGCGTCCATCCGCATGGTCATGTCCGGCGCCGCGCCCATGGGCAAGGAGCTCCAGGACGCCTTCATGGCCAAGATTCCCAATGCCGTGCTCGGGCAGGGGTACGGGATGACGGAGGCAGGCCCCGTGCTGGCGATGTGCCTGGCCTTCGCCAAGGAGCCGTACCCGGTCAAGTCCGGGTCGTGCGGCACCGTGGTGCGGAACGCGGAGCTGAAGATCGTCGACCCCGACACCGGCGCCGCCCTCGGCCGGAACCAGCCCGGCGAGATCTGCATCCGCGGGGAGCAGATCATGAAAGGTTACCTGAACGACCCCGAGTCGACGAAGAACACCATCGACAAGGACGGCTGGCTGCACACCGGAGACATCGGCTACGTGGACGACGACGACGAGATCTTCATCGTCGACAGGCTCAAGGAGATCATCAAGTACAAGGGCTTCCAGGTGCCGCCGGCGGAGCTGGAGGCGCTCCTCATCACGCACCCGGAGATCAAGGACGCCGCCGTCGTATCAATGAACGATGACCTTGCTGGTGAAATCCCGGTCGCCTTCATCGTGCGGACCGAAGGTTCTCAAGTCACCGAGGATGAGATCAAGCAATTCGTCGCCAAGGAGGTGGTTTTCTACAAGAAGATCCACAAGGTCTTCTTCACCGAATCCATCCCCAAGAACCCGTCGGGCAAGATCCTGAGGAAGGACTTGAGAGCCAGGCTCGCCGCCGGTGTTCACTGAGGCCCGTATGCAGCTTCTTCTCGGACGGCCACCACGCTGCTGCGAAAAAAAAGGCGATGTAATGGCGGTAACACTACTATTCATGAACTGGCAACAGAAGGGACACGTATTCCTGTGGAACACATGTTGCCAGAAAGAGGTTTTAGTTTGTCTGTTTGTTGGCCCTGTGTGTAATGTTCATAAACGATATAGACGTCGTCTCTATGTTGTTTTTGACCCAAAGAACAAGCCTGATTACGGCAATACAGCTACGGAGTACCGTGTTTCATATGCCTAGATGTTTGTCATAAGTTATTATAGCCGGAGATGGCGATGGGCCTCGATCTCTCCTTCACTAGGACTAGTTTGGCAACGAGGAGAGAAAAATCCCTTGAAAATTAATCTAGGAGGGGATTTTAGATGCCACCTTATTTCCCCCCTCTTCGGTGTACTTCTCTGACATTGTTTGAGAAGCAATGGGCTAAATACCTCTGTTGAGCAAAAATACATAAAAAAATCAGGAAAAATAAAAAATATATAAGAAATATTTAGAAAACTCACAAACAATAAAACATCACTAAAGATCCAAAAATATGAAGCACCTATGATTCACGCAAAGTTTAGGGTTTTGAATACCATCTAATATCAAACGAAGCTAATCCATCATCACATCACATAGTATCATCATCTCCATTCACACGTACAGGTAGACAATATAATATAAAAATGGAGTATTAGGAAGTTTGGCAGTAGAATAAGACATCTAAAATATGCACGCCACATGCCAACTTAATGCGTTTTAGTTTCATGCCAGCTTCCTTCTCCATGTC
CDS Sequence
  • >Zm00001eb233720_T001
    ATGGGTTCCGTAGACGCGGCGATCGCGGTGCCGGTGCCGGCGGCGGAGGAGAAGGCGGTGGAGGAGAAGGCGGTGGTGTTCCGGTCCAAGCTCCCCGACATCGAGATCGACAGCAGCATGGCGCTGCACACCTACTGCTTCGGGAAGATGGGTGAGGTGGCGGAGCGGGCGTGCCTGGTCGACGGGCTGACGGGCGCGTCGTACACGTACGCGGAGGTGGAGTCCCTGTCCCGGCGCGCCGCGTCGGGGCTGCGCGCCATGGGGGTGGGCAAGGGCGACGTGGTGATGAGCCTGCTCCGCAACTGCCCCGAGTTCGCCTTCACCTTCCTGGGCGCCGCCCGCCTGGGCGCCGCCACCACCACGGCCAACCCGTTCTACACCCCGCACGAGGTGCGGGAGTTCGCGGCGGAGCGGGGCATCCCCGTGGTCACCGTCGACGGGCGCTTCGACGGCTGCGTGGAGTTCGCCGAGCTGATCGCGGCCGAGGAGCTGGAGGCCGACGCCGACATCCACCCCGACGACGTCGTCGCGCTGCCCTACTCCTCCGGCACCACCGGGCTGCCCAAGGGCGTCATGCTCACCCACCGCAGCCTCATCACCAGCGTCGCGCAGCAGGTTGATGGCGAGAACCCGAACCTGTACTTCCGCAAGGACGACGTGGTGCTGTGCCTGCTGCCGCTGTTCCACATCTACTCGCTGAACTCGGTGCTGCTGGCCGGCCTGCGCGCGGGCTCCACCATCGTGATCATGCGCAAGTTCGACCTGGGCGCGCTGGTGGACCTGGTGCGCAGGTACGTGATCACCATCGCGCCCTTCGTGCCGCCCATCGTGGTGGAGATCGCCAAGAGCCCCCGCGTGACCGCCGGCGACCTCGCGTCCATCCGCATGGTCATGTCCGGCGCCGCGCCCATGGGCAAGGAGCTCCAGGACGCCTTCATGGCCAAGATTCCCAATGCCGTGCTCGGGCAGGGGTACGGGATGACGGAGGCAGGCCCCGTGCTGGCGATGTGCCTGGCCTTCGCCAAGGAGCCGTACCCGGTCAAGTCCGGGTCGTGCGGCACCGTGGTGCGGAACGCGGAGCTGAAGATCGTCGACCCCGACACCGGCGCCGCCCTCGGCCGGAACCAGCCCGGCGAGATCTGCATCCGCGGGGAGCAGATCATGAAAGGTTACCTGAACGACCCCGAGTCGACGAAGAACACCATCGACAAGGACGGCTGGCTGCACACCGGAGACATCGGCTACGTGGACGACGACGACGAGATCTTCATCGTCGACAGGCTCAAGGAGATCATCAAGTACAAGGGCTTCCAGGTGCCGCCGGCGGAGCTGGAGGCGCTCCTCATCACGCACCCGGAGATCAAGGACGCCGCCGTCGTATCAATGAACGATGACCTTGCTGGTGAAATCCCGGTCGCCTTCATCGTGCGGACCGAAGGTTCTCAAGTCACCGAGGATGAGATCAAGCAATTCGTCGCCAAGGAGGTGGTTTTCTACAAGAAGATCCACAAGGTCTTCTTCACCGAATCCATCCCCAAGAACCCGTCGGGCAAGATCCTGAGGAAGGACTTGAGAGCCAGGCTCGCCGCCGGTGTTCACTGA
  • >Zm00001eb233720_T002
    ATGGGTTCCGTAGACGCGGCGATCGCGGTGCCGGTGCCGGCGGCGGAGGAGAAGGCGGTGGAGGAGAAGGCGGTGGTGTTCCGGTCCAAGCTCCCCGACATCGAGATCGACAGCAGCATGGCGCTGCACACCTACTGCTTCGGGAAGATGGGTGAGGTGGCGGAGCGGGCGTGCCTGGTCGACGGGCTGACGGGCGCGTCGTACACGTACGCGGAGGTGGAGTCCCTGTCCCGGCGCGCCGCGTCGGGGCTGCGCGCCATGGGGGTGGGCAAGGGCGACGTGGTGATGAGCCTGCTCCGCAACTGCCCCGAGTTCGCCTTCACCTTCCTGGGCGCCGCCCGCCTGGGCGCCGCCACCACCACGGCCAACCCGTTCTACACCCCGCACGAGGTGCGGGAGTTCGCGGCGGAGCGGGGCATCCCCGTGGTCACCGTCGACGGGCGCTTCGACGGCTGCGTGGAGTTCGCCGAGCTGATCGCGGCCGAGGAGCTGGAGGCCGACGCCGACATCCACCCCGACGACGTCGTCGCGCTGCCCTACTCCTCCGGCACCACCGGGCTGCCCAAGGGCGTCATGCTCACCCACCGCAGCCTCATCACCAGCGTCGCGCAGCAGGTTGATGGCGAGAACCCGAACCTGTACTTCCGCAAGGACGACGTGGTGCTGTGCCTGCTGCCGCTGTTCCACATCTACTCGCTGAACTCGGTGCTGCTGGCCGGCCTGCGCGCGGGCTCCACCATCGTGATCATGCGCAAGTTCGACCTGGGCGCGCTGGTGGACCTGGTGCGCAGGTACGTGATCACCATCGCGCCCTTCGTGCCGCCCATCGTGGTGGAGATCGCCAAGAGCCCCCGCGTGACCGCCGGCGACCTCGCGTCCATCCGCATGGTCATGTCCGGCGCCGCGCCCATGGGCAAGGAGCTCCAGGACGCCTTCATGGCCAAGATTCCCAATGCCGTGCTCGGGCAGGGGTACGGGATGACGGAGGCAGGCCCCGTGCTGGCGATGTGCCTGGCCTTCGCCAAGGAGCCGTACCCGGTCAAGTCCGGGTCGTGCGGCACCGTGGTGCGGAACGCGGAGCTGAAGATCGTCGACCCCGACACCGGCGCCGCCCTCGGCCGGAACCAGCCCGGCGAGATCTGCATCCGCGGGGAGCAGATCATGAAAGGTTACCTGAACGACCCCGAGTCGACGAAGAACACCATCGACAAGGACGGCTGGCTGCACACCGGAGACATCGGCTACGTGGACGACGACGACGAGATCTTCATCGTCGACAGGCTCAAGGAGATCATCAAGTACAAGGGCTTCCAGGTGCCGCCGGCGGAGCTGGAGGCGCTCCTCATCACGCACCCGGAGATCAAGGACGCCGCCGTCGTATCAATGAACGATGACCTTGCTGGTGAAATCCCGGTCGCCTTCATCGTGCGGACCGAAGGTTCTCAAGTCACCGAGGATGAGATCAAGCAATTCGTCGCCAAGGAGGTGGTTTTCTACAAGAAGATCCACAAGGTCTTCTTCACCGAATCCATCCCCAAGAACCCGTCGGGCAAGATCCTGAGGAAGGACTTGAGAGCCAGGCTCGCCGCCGGTGTTCACTGA
Protein Sequence
  • >Zm00001eb233720_P001
    MGSVDAAIAVPVPAAEEKAVEEKAVVFRSKLPDIEIDSSMALHTYCFGKMGEVAERACLVDGLTGASYTYAEVESLSRRAASGLRAMGVGKGDVVMSLLRNCPEFAFTFLGAARLGAATTTANPFYTPHEVREFAAERGIPVVTVDGRFDGCVEFAELIAAEELEADADIHPDDVVALPYSSGTTGLPKGVMLTHRSLITSVAQQVDGENPNLYFRKDDVVLCLLPLFHIYSLNSVLLAGLRAGSTIVIMRKFDLGALVDLVRRYVITIAPFVPPIVVEIAKSPRVTAGDLASIRMVMSGAAPMGKELQDAFMAKIPNAVLGQGYGMTEAGPVLAMCLAFAKEPYPVKSGSCGTVVRNAELKIVDPDTGAALGRNQPGEICIRGEQIMKGYLNDPESTKNTIDKDGWLHTGDIGYVDDDDEIFIVDRLKEIIKYKGFQVPPAELEALLITHPEIKDAAVVSMNDDLAGEIPVAFIVRTEGSQVTEDEIKQFVAKEVVFYKKIHKVFFTESIPKNPSGKILRKDLRARLAAGVH
  • >Zm00001eb233720_P002
    MGSVDAAIAVPVPAAEEKAVEEKAVVFRSKLPDIEIDSSMALHTYCFGKMGEVAERACLVDGLTGASYTYAEVESLSRRAASGLRAMGVGKGDVVMSLLRNCPEFAFTFLGAARLGAATTTANPFYTPHEVREFAAERGIPVVTVDGRFDGCVEFAELIAAEELEADADIHPDDVVALPYSSGTTGLPKGVMLTHRSLITSVAQQVDGENPNLYFRKDDVVLCLLPLFHIYSLNSVLLAGLRAGSTIVIMRKFDLGALVDLVRRYVITIAPFVPPIVVEIAKSPRVTAGDLASIRMVMSGAAPMGKELQDAFMAKIPNAVLGQGYGMTEAGPVLAMCLAFAKEPYPVKSGSCGTVVRNAELKIVDPDTGAALGRNQPGEICIRGEQIMKGYLNDPESTKNTIDKDGWLHTGDIGYVDDDDEIFIVDRLKEIIKYKGFQVPPAELEALLITHPEIKDAAVVSMNDDLAGEIPVAFIVRTEGSQVTEDEIKQFVAKEVVFYKKIHKVFFTESIPKNPSGKILRKDLRARLAAGVH

Source: Genetic information comes from the article