Information report for VIT_17s0000g08960
Gene Details
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Functional Descriptions
- Genetic variation of VIT_17s0000g08960 coding for a raffinose synthase was further investigated by resequencing the gene of 85 individuals since a SNP located in the region (chr17_10,497,222_C_T) was significantly associated with stomatal conductance.
- These genotypes were selected both to represent putatively different classes of response to water stress and based on the SNP chr17_10,497,222_C_T at the candidate gene VIT_17s0000g08960
- The analysis of the VIT_17s0000g08960 transcripts during water deficit revealed that this gene was modulated only in SO4 vines. A significantly higher expression was detected after four days, when plants start to perceive the symptoms of stress, indicating that it might be implicated in early response to drought stress.
Functional Keywords
Literature and News
Sequences
cDNA Sequence
- >Vitvi17g00885_t001
CATAACGGTTGTTAGTGCTTTAATTTTTTGTCTGCCTTTTCATTTCCATGGCTCCCAGCTTGAGCAAAGGTGCTCCGGATGTAATGGGGTTGGAGGACGGTCAGTCATCGTCATCGATCACCCTTCAGGGTTCTGATTTTTTGGCTAATGGCCACCCAGTTCTCACGGAAGTCCCTTCTAACATTGTGGCCATTCCATCACCCTCTAGTCCTGGAAACAAGGCCAAAACCATGGTGGGGTGCTTCGTGGGGTTCGAGGCCGGCGAGGCCAAGAGCCGGCACGTCGTCCCCGTCGGGAAGCTCCAGGAAATACCGTTCATGAGCATATTCAGATTCAAGGTGTGGTGGACCACCCACTGGGTAGGAACCCGCGGAGGAGATGTGGAGCACGAGACCCAGATGATGATTCTGGACAAATCGGACATGGGTCGACCCTATGTTCTCCTCCTCCCACTCATAGAAGGTCCCTTCAGAGCCTCTCTCCAGCCGGGAGAAGACGACAACGTCGACATCTGCGTGGAAAGCGGCTCCACCTCCGTGCGCACCTCCGCCTTCCGGAGCTGCCTCTACATGCACGTAGGAGACAACCCTTATGAACTAGTGAAGGACGCAATGAAAGTGGTGAGGGTCCATCTGGGGACCTTCAAGCTTTTGGAAGAGAAGAGCCCTCCAGGTATAGTAGACAAATTTGGCTGGTGTACATGGGATGCATTTTACCTTAAAGTACACCCCGAAGGTGTTTGGGAAGGAGTGAAGGGCCTAGTGGAGGGTGGGTGCCCTCCTGGCATGGTCCTAATAGACGACGGATGGCAGTCCATCGGTCACGACGATGAACCCATCTCCGACCAAGAAGGCATTAACAGAACCGCCGCGGGTGAGCAAATGCCATGTAGGCTCATAAAATTTGAGGAAAACTACAAGTTTAGGGAGTATGAGAGTCCTAGGGTACCCCAGGAGAAGGGTATGGGGGCATTTGTTAGGGACCTCAAGGATGAGTTTAAGAGCGTAGAACATGTGTATGTGTGGCATGCCCTTTGTGGATATTGGGGTGGGATCAGACCCAATGTCCCAGGCATGCCTGAGTCTAGGGTCATCGCTCCTAAGCTGTCACAGGGTTTGCAGATGACTATGGAGGATTTGGCCGTGGACAAGATCGTCAACAATGGTGTGGGGCTGGTGCCGCCGGAGTCGGTGGCGGAAATGTACGACGGCCTCCACTCTCGGCTGCAATCGGTTGGCGTTGATGGAGTCAAGGTTGATGTGATCCACTTGCTAGAGATGGTAGCAGAGGAATATGGTGGGCGAGTGGAGCTGGCAAAAGCCTATTACAAGGCACTGACTGCATCGGTAAGGAAACATTTCAAAGGGAATGGTGTAATTGCTAGCATGGAGCACTGCAATGACTTCATGTTCCTGGGGACTGAGACCATTTCGCTCGGCCGCGTTGGGGATGATTTTTGGTGCACCGACCCTTCCGGAGATCCGAACGGCACATTTTGGCTACAAGGGTGTCACATGGTGCATTGTGCCTACAACAGCCTGTGGATGGGCAACTTCATACACCCTGACTGGGACATGTTTCAATCCACCCACCCATGTGCTGAGTTCCACGCCGCTTCACGGGCTGTCTCCGGGGGACCAATATATGTCAGCGACCACGTCGGGAAACACAACTTCCAGCTCCTGAAAACCCTCGTCTTGCCCGATGGGTCGCTTCTGAGGTGCCAACACTACGCCCTTCCCTCAAGAGATTGCCTGTTCCAGGACCCATTACATGATGGGAAAACCATGCTCAAGATTTGGAACCTTAACAAATACACAGGAGTTTTAGGAGCATTCAACTGCCAAGGAGGAGGGTGGTGCAGAGAAACACGAAGAAACAAGAGCGCCTCCGAGTACTCCCGCACCGTTTCATGCTTGGCAAACCCGAGTAAAGACATAGAGTGGAGCGCCGGGAAGAGTCCCATCTCCACCAAAGATGTGGACCTTTTTGCAGTGTACATGTTTCAGGAGAAGACGATGAAGCTGTTGAAGCCATCAGAGAGCCTGGAGATCTCACTGGATCCATTCAAATTTGAACTCCTCACAGTCTCTCCTGTGAAGGTGTTGCCCAGAAATAATAACAATTCAATTCAGTTTGCTCCATTCGGACTGGTGAACATGCTCAACGGTGGCGGGGCGGTTGAGTGGGTGGAGTTGGATGAAGATGAAGATAGGGTGAAAATTGGAGTGAAGGGATGTGGAGAAATGAAGGCATTTGCATCTGAAAAACCAACTACATGTAAGATCAATGGAGAGGGTGTGAAGTTCAGTTACGAGGCCCATACGGTTGGGGTTCAAGTTCCTTGGCCTAGTTCATCACAAGTGTCAATTGTAGAGTACTTGTTCTGA
CDS Sequence
- >Vitvi17g00885_t001
ATGGCTCCCAGCTTGAGCAAAGGTGCTCCGGATGTAATGGGGTTGGAGGACGGTCAGTCATCGTCATCGATCACCCTTCAGGGTTCTGATTTTTTGGCTAATGGCCACCCAGTTCTCACGGAAGTCCCTTCTAACATTGTGGCCATTCCATCACCCTCTAGTCCTGGAAACAAGGCCAAAACCATGGTGGGGTGCTTCGTGGGGTTCGAGGCCGGCGAGGCCAAGAGCCGGCACGTCGTCCCCGTCGGGAAGCTCCAGGAAATACCGTTCATGAGCATATTCAGATTCAAGGTGTGGTGGACCACCCACTGGGTAGGAACCCGCGGAGGAGATGTGGAGCACGAGACCCAGATGATGATTCTGGACAAATCGGACATGGGTCGACCCTATGTTCTCCTCCTCCCACTCATAGAAGGTCCCTTCAGAGCCTCTCTCCAGCCGGGAGAAGACGACAACGTCGACATCTGCGTGGAAAGCGGCTCCACCTCCGTGCGCACCTCCGCCTTCCGGAGCTGCCTCTACATGCACGTAGGAGACAACCCTTATGAACTAGTGAAGGACGCAATGAAAGTGGTGAGGGTCCATCTGGGGACCTTCAAGCTTTTGGAAGAGAAGAGCCCTCCAGGTATAGTAGACAAATTTGGCTGGTGTACATGGGATGCATTTTACCTTAAAGTACACCCCGAAGGTGTTTGGGAAGGAGTGAAGGGCCTAGTGGAGGGTGGGTGCCCTCCTGGCATGGTCCTAATAGACGACGGATGGCAGTCCATCGGTCACGACGATGAACCCATCTCCGACCAAGAAGGCATTAACAGAACCGCCGCGGGTGAGCAAATGCCATGTAGGCTCATAAAATTTGAGGAAAACTACAAGTTTAGGGAGTATGAGAGTCCTAGGGTACCCCAGGAGAAGGGTATGGGGGCATTTGTTAGGGACCTCAAGGATGAGTTTAAGAGCGTAGAACATGTGTATGTGTGGCATGCCCTTTGTGGATATTGGGGTGGGATCAGACCCAATGTCCCAGGCATGCCTGAGTCTAGGGTCATCGCTCCTAAGCTGTCACAGGGTTTGCAGATGACTATGGAGGATTTGGCCGTGGACAAGATCGTCAACAATGGTGTGGGGCTGGTGCCGCCGGAGTCGGTGGCGGAAATGTACGACGGCCTCCACTCTCGGCTGCAATCGGTTGGCGTTGATGGAGTCAAGGTTGATGTGATCCACTTGCTAGAGATGGTAGCAGAGGAATATGGTGGGCGAGTGGAGCTGGCAAAAGCCTATTACAAGGCACTGACTGCATCGGTAAGGAAACATTTCAAAGGGAATGGTGTAATTGCTAGCATGGAGCACTGCAATGACTTCATGTTCCTGGGGACTGAGACCATTTCGCTCGGCCGCGTTGGGGATGATTTTTGGTGCACCGACCCTTCCGGAGATCCGAACGGCACATTTTGGCTACAAGGGTGTCACATGGTGCATTGTGCCTACAACAGCCTGTGGATGGGCAACTTCATACACCCTGACTGGGACATGTTTCAATCCACCCACCCATGTGCTGAGTTCCACGCCGCTTCACGGGCTGTCTCCGGGGGACCAATATATGTCAGCGACCACGTCGGGAAACACAACTTCCAGCTCCTGAAAACCCTCGTCTTGCCCGATGGGTCGCTTCTGAGGTGCCAACACTACGCCCTTCCCTCAAGAGATTGCCTGTTCCAGGACCCATTACATGATGGGAAAACCATGCTCAAGATTTGGAACCTTAACAAATACACAGGAGTTTTAGGAGCATTCAACTGCCAAGGAGGAGGGTGGTGCAGAGAAACACGAAGAAACAAGAGCGCCTCCGAGTACTCCCGCACCGTTTCATGCTTGGCAAACCCGAGTAAAGACATAGAGTGGAGCGCCGGGAAGAGTCCCATCTCCACCAAAGATGTGGACCTTTTTGCAGTGTACATGTTTCAGGAGAAGACGATGAAGCTGTTGAAGCCATCAGAGAGCCTGGAGATCTCACTGGATCCATTCAAATTTGAACTCCTCACAGTCTCTCCTGTGAAGGTGTTGCCCAGAAATAATAACAATTCAATTCAGTTTGCTCCATTCGGACTGGTGAACATGCTCAACGGTGGCGGGGCGGTTGAGTGGGTGGAGTTGGATGAAGATGAAGATAGGGTGAAAATTGGAGTGAAGGGATGTGGAGAAATGAAGGCATTTGCATCTGAAAAACCAACTACATGTAAGATCAATGGAGAGGGTGTGAAGTTCAGTTACGAGGCCCATACGGTTGGGGTTCAAGTTCCTTGGCCTAGTTCATCACAAGTGTCAATTGTAGAGTACTTGTTCTGA
Protein Sequence
- >Vitvi17g00885_P001
MAPSLSKGAPDVMGLEDGQSSSSITLQGSDFLANGHPVLTEVPSNIVAIPSPSSPGNKAKTMVGCFVGFEAGEAKSRHVVPVGKLQEIPFMSIFRFKVWWTTHWVGTRGGDVEHETQMMILDKSDMGRPYVLLLPLIEGPFRASLQPGEDDNVDICVESGSTSVRTSAFRSCLYMHVGDNPYELVKDAMKVVRVHLGTFKLLEEKSPPGIVDKFGWCTWDAFYLKVHPEGVWEGVKGLVEGGCPPGMVLIDDGWQSIGHDDEPISDQEGINRTAAGEQMPCRLIKFEENYKFREYESPRVPQEKGMGAFVRDLKDEFKSVEHVYVWHALCGYWGGIRPNVPGMPESRVIAPKLSQGLQMTMEDLAVDKIVNNGVGLVPPESVAEMYDGLHSRLQSVGVDGVKVDVIHLLEMVAEEYGGRVELAKAYYKALTASVRKHFKGNGVIASMEHCNDFMFLGTETISLGRVGDDFWCTDPSGDPNGTFWLQGCHMVHCAYNSLWMGNFIHPDWDMFQSTHPCAEFHAASRAVSGGPIYVSDHVGKHNFQLLKTLVLPDGSLLRCQHYALPSRDCLFQDPLHDGKTMLKIWNLNKYTGVLGAFNCQGGGWCRETRRNKSASEYSRTVSCLANPSKDIEWSAGKSPISTKDVDLFAVYMFQEKTMKLLKPSESLEISLDPFKFELLTVSPVKVLPRNNNNSIQFAPFGLVNMLNGGGAVEWVELDEDEDRVKIGVKGCGEMKAFASEKPTTCKINGEGVKFSYEAHTVGVQVPWPSSSQVSIVEYLF