Gene Details:
- Gene ID: Vitvi14g00339
- Gene Symbol: VvSDH3
- Gene Name: shikimate dehydrogenase 3
- Genome: Vitis vinifera PN40024.v4
- Species: Vitis vinifera
Functional Descriptions:
- Two shikimate dehydrogenases, VvSDH3 and VvSDH4, are involved in gallic acid biosynthesis in grapevine.
- VvSDH3 and VvSDH4, mainly expressed in immature berry tissues in which galloylated flavan-3-ols are accumulated, encoded enzymes with lower ‘classical’ activity but were able to produce gallic acid in vitro.
- The over-expression of VvSDH3 in hairy-roots increased the content of aromatic amino acids and hydroxycinnamates, but had little or no effect on molecules more distant from the shikimate pathway (stilbenoids and flavan-3-ols).
- VvSDH3 and VvSDH4 are good candidates for GA biosynthesis in immature grape berry tissues. However, other molecular actors involved in GA transport and PA galloylation remain to be identified.
Function-related keywords:
- ga , ga-biosynthesis , berry
Literature:
- Two shikimate dehydrogenases, VvSDH3 and VvSDH4, are involved in gallic acid biosynthesis in grapevine. DOI: 10.1093/jxb/erw184 ; PMID: 27241494
Related News:
Gene Resources:
- NCBI ID: 100248678
- UniProt accessions: A0A168S2G5
Orthologs:
Sequences:
cDNA Sequence
- >Vitvi14g00339_t001
TTTCCTTCTTTCAGGCTTTCAGCAGCTTCTAACTAAGCCACTGTCCACTGAATATTTTTCGATATGGGGAGCCTCCCATTTACTGTTTCAGATCTTCAGACAAGTGTTAGTGGAGTTAGGAGCAACCCCACTTTGCTATGCACCCCATTGATGGGTACCACAGTGGAGCAGATGCTGACCGAGATGAGAAAAGCAAAGGAAATTGGTGCAGATATTGTGGAAATCAGGCTGGATTGTTTGAGGAACTTCAGTCCTGCACAAGATCTTCAAATTCTTATCAAACAATCTCCTTTGCCAACTCTAGTGACTTATAGACCTATATGGGAGGGTGGTCAGTATGAAGGTGATGAAAACAAGCGACAAGATGCACTTCGACTCGCAATGGAACTGGGTGCAAGTTACATTGATGTTGAGCTTGAGGTTGCTCATGAATTCAATAATTCAATTTATGGGAAGAAGCCCCAAAACTTCAAAGTCATTGTTTCTTCTCACAATTTCCACAACACCCCATCTACTGAGGCTATTGGGAATCTGGTGGCCAGAATCCAAGCCAGTGGAGCTGATATAGTGAAGATTGCAACAACTGCATTAGACATCACAGATGTGGCTCGGGTTCTTCAAGTAACTGTGCATTCTCAAGTTCCAACAATAGCAATTGTCATGGGGGAGAGGGGTTTGATTTCACGGTTACTTAGCCCCAAATTTGGTGGATATCTCACTTATGGTGCACTTGAAGCTGGTGCAATATCAGCTCCTGGGCAACCAACAGCCAAAGACTTGTTGGATTTGTACAACTTCAGGCTTATTAAACCCGATACCAAAGTATATGGCATCATTGGGAAGCCTGTTGGACACAGCAAGAGTCCTCTTTTGTTCAATGCAGCATTTAAGAAAGTCGGTCTTAATGCTGTTTATGTGCATTTGCTGGTGGATGATGTTGAGAAGTTCTTCAACACCTATTCAGCCCCTGATTTTATCTCTGGATGCAGTTGTACAATCCCTCACAAGGAGGTTGCAATCAAATGCATGGATACTATTGACCCCATTGCACGGAAAATTGGAGCTATTAACAATATTGTTAGGAAACCAGATGGAAAGTTAACTGCTTTTAACACCGACTACATTGGTGCCATAGAAGCCATAGAGGATGGACTAAGAGAATCAAATGGTTCAAGCCCTGCAGTTGGCTCACCCTTAGCCGGGAAATTGTTCGTTGTCTTGGGAGCTGGTGGTGCTGGCAAGTCACTCGCTTATGGTGCTAAAGAAAAGGGAGCAAGAGTGGTAGTTGCCAACCGAACATTTGAAAGAGCTAAGGATCTAGCTGACAAAGTTGGGGGCCAAGCTTTGACCCTTGCAGAAATAGAGAACTTCCACCCAGAAGAAGGGATGATTCTTGCAAACACTACATCTGTGGGAATGAAACCGAAAATTAATGACACTCCCATTCCCAAGCATGCTTTGAAGCATTACTCCCTAGTATTTGATGCCATATACACACCAAAAGACACTAGACTCTTGAGGGAAGCAAAAGAGAGTGGAAAAATTATAGTTTATGGGACAGAGATGTTGATCCGCCAAGGCTTTGAACAATACAAGAACTTCACTGGTTTGCCTGCCCCTGAAGAATTGTTTAGGGAGCTTATGTCGAAACACGCATAAGAGGATATTTGCTTGGGCAGTCAGTTGTTGCAGCTGGATCTATGTTTATACCTGCCTCATTTCAGTTCCTTACCATTTGGTTAGCTATATATTC
CDS Sequence
- >Vitvi14g00339_t001
ATGGGGAGCCTCCCATTTACTGTTTCAGATCTTCAGACAAGTGTTAGTGGAGTTAGGAGCAACCCCACTTTGCTATGCACCCCATTGATGGGTACCACAGTGGAGCAGATGCTGACCGAGATGAGAAAAGCAAAGGAAATTGGTGCAGATATTGTGGAAATCAGGCTGGATTGTTTGAGGAACTTCAGTCCTGCACAAGATCTTCAAATTCTTATCAAACAATCTCCTTTGCCAACTCTAGTGACTTATAGACCTATATGGGAGGGTGGTCAGTATGAAGGTGATGAAAACAAGCGACAAGATGCACTTCGACTCGCAATGGAACTGGGTGCAAGTTACATTGATGTTGAGCTTGAGGTTGCTCATGAATTCAATAATTCAATTTATGGGAAGAAGCCCCAAAACTTCAAAGTCATTGTTTCTTCTCACAATTTCCACAACACCCCATCTACTGAGGCTATTGGGAATCTGGTGGCCAGAATCCAAGCCAGTGGAGCTGATATAGTGAAGATTGCAACAACTGCATTAGACATCACAGATGTGGCTCGGGTTCTTCAAGTAACTGTGCATTCTCAAGTTCCAACAATAGCAATTGTCATGGGGGAGAGGGGTTTGATTTCACGGTTACTTAGCCCCAAATTTGGTGGATATCTCACTTATGGTGCACTTGAAGCTGGTGCAATATCAGCTCCTGGGCAACCAACAGCCAAAGACTTGTTGGATTTGTACAACTTCAGGCTTATTAAACCCGATACCAAAGTATATGGCATCATTGGGAAGCCTGTTGGACACAGCAAGAGTCCTCTTTTGTTCAATGCAGCATTTAAGAAAGTCGGTCTTAATGCTGTTTATGTGCATTTGCTGGTGGATGATGTTGAGAAGTTCTTCAACACCTATTCAGCCCCTGATTTTATCTCTGGATGCAGTTGTACAATCCCTCACAAGGAGGTTGCAATCAAATGCATGGATACTATTGACCCCATTGCACGGAAAATTGGAGCTATTAACAATATTGTTAGGAAACCAGATGGAAAGTTAACTGCTTTTAACACCGACTACATTGGTGCCATAGAAGCCATAGAGGATGGACTAAGAGAATCAAATGGTTCAAGCCCTGCAGTTGGCTCACCCTTAGCCGGGAAATTGTTCGTTGTCTTGGGAGCTGGTGGTGCTGGCAAGTCACTCGCTTATGGTGCTAAAGAAAAGGGAGCAAGAGTGGTAGTTGCCAACCGAACATTTGAAAGAGCTAAGGATCTAGCTGACAAAGTTGGGGGCCAAGCTTTGACCCTTGCAGAAATAGAGAACTTCCACCCAGAAGAAGGGATGATTCTTGCAAACACTACATCTGTGGGAATGAAACCGAAAATTAATGACACTCCCATTCCCAAGCATGCTTTGAAGCATTACTCCCTAGTATTTGATGCCATATACACACCAAAAGACACTAGACTCTTGAGGGAAGCAAAAGAGAGTGGAAAAATTATAGTTTATGGGACAGAGATGTTGATCCGCCAAGGCTTTGAACAATACAAGAACTTCACTGGTTTGCCTGCCCCTGAAGAATTGTTTAGGGAGCTTATGTCGAAACACGCATAA
Protein Sequence
- >Vitvi14g00339_P001
MGSLPFTVSDLQTSVSGVRSNPTLLCTPLMGTTVEQMLTEMRKAKEIGADIVEIRLDCLRNFSPAQDLQILIKQSPLPTLVTYRPIWEGGQYEGDENKRQDALRLAMELGASYIDVELEVAHEFNNSIYGKKPQNFKVIVSSHNFHNTPSTEAIGNLVARIQASGADIVKIATTALDITDVARVLQVTVHSQVPTIAIVMGERGLISRLLSPKFGGYLTYGALEAGAISAPGQPTAKDLLDLYNFRLIKPDTKVYGIIGKPVGHSKSPLLFNAAFKKVGLNAVYVHLLVDDVEKFFNTYSAPDFISGCSCTIPHKEVAIKCMDTIDPIARKIGAINNIVRKPDGKLTAFNTDYIGAIEAIEDGLRESNGSSPAVGSPLAGKLFVVLGAGGAGKSLAYGAKEKGARVVVANRTFERAKDLADKVGGQALTLAEIENFHPEEGMILANTTSVGMKPKINDTPIPKHALKHYSLVFDAIYTPKDTRLLREAKESGKIIVYGTEMLIRQGFEQYKNFTGLPAPEELFRELMSKHA