Information report for VvSDH4
Gene Details
|
|
Functional Descriptions
- Two shikimate dehydrogenases, VvSDH3 and VvSDH4, are involved in gallic acid biosynthesis in grapevine.
- VvSDH3 and VvSDH4, mainly expressed in immature berry tissues in which galloylated flavan-3-ols are accumulated, encoded enzymes with lower ‘classical’ activity but were able to produce gallic acid in vitro.
- The over-expression of VvSDH4 in hairy-roots increased the content of aromatic amino acids and hydroxycinnamates, but had little or no effect on molecules more distant from the shikimate pathway (stilbenoids and flavan-3-ols).
- VvSDH3 and VvSDH4 are good candidates for GA biosynthesis in immature grape berry tissues. However, other molecular actors involved in GA transport and PA galloylation remain to be identified.
Functional Keywords
- ga , ga-biosynthesis , berry
Literature and News
Gene Resources
- NCBI ID: 100243536
- UniProt accessions: A0A168S2H6
Sequences
cDNA Sequence
- >Vitvi14g00338_t001
AGCAATCACAAACTCTCTCTTTCGCTCCCAGACCCATCACCACTTTCTCTCTACAATGACTCTCAGCAGCGTTCCGTTGGCTACTTCGGATATACAAATCCCAGAAGGAGCCCGGAGAAATTCGACGCTAATATGTGTTCCAATAATGGCGGATTCCGTGGATCAAATGTTGGGTCAGATAAGAAAGGCAAAAGAAGTTGGTGGTGACCTTGTGGAGATTCGGTTAGATTATTTGAAGAACTTCAGTCCTAGACAAGATCTCCAATTCTTAGTCAAACAATCTCCTTTGCCCACTCTTGTCACTTACAGACCAACATGGGAAGGTGGTCAGTATGACGGTGATGAAGGAAAGAGACTGGATGCGCTGCGCCTAGCCATTGAATTGGGAGCTGATTATATTGATGTTGAGCTTCAGGTAGCTCCTGAGTTCATCAATTCCATTCAGGGGAAAACATCTGGAAATGTCAAAATCATTGTTTCTTCTCACAACTACCAAAATTCTCCTTCTGCTGAGGAGCTTGGCAATCTTGTGGCAAGAATACAAGCTACTGGAGCTGACATAGTGAAGATTGCAACAACTGCTTTAGACATTACAGACTGTGCACGGATTTTTCAAGTGCTCGCACATTCCCAAGTCCCAACTATAGGAATTGCTATGGCAGAGAGGGGTTTAATTTCAAGGATACTTAGTGCCAAATTTGGTAGCTATCTCACTTTTGGTTCACTTGAGGCAGGAGTGGTGTCAGCTCCTGGGCAACCAACTGTAAAAGATTTGTTGGATTTATACAATTTCAGACAGATAGGACCTGATACGAAGGTGCATGGTGTCATTGGAAAGCCTATTGGTCACAGCAAGAGCCCTCATCTATACAACTCGGCATTTAAGTCAGTTGGCTTTAATGGAATTTATTTGCCTCTGTTGGTCGACAGTGTCAAAAATTTTCTCACCACCTATTCATCCCCTGATTTTGTTGGATACAGCTATACGATTCCTCACAAGGAGGATGGACTTAGATGCTGTGATGAGATCGATCCCATTGCCCAGGCAATAGGAGCTATTAGCTGCATGATTAGAAGACCGGCTGATGGGAAGCTAATGGGGTATAATGTCGACTATCTTGGAGCCATTGCAGCTATTGAGGAGGGACTACGAGCTTCAAATGGTACAACCAGTGTTGGCTCACCCTTAGCTGGAAAACTGTTTGTTGTCATTGGTGCTGGTGGTGCTGGAAAGGCACTTGCTTATGGTGGAAAAGAAAAGGGAGCAAGAGTAGTAGTGGCCAATCGCACATTTGAGAAAGCTAAAGAACTTGCAAGTAAAGTTGGGGGAGAGGCCATGACTCTTGCGGAATTAGAAAATTTCCATCCAGAAGATGGGATGATTCTTGCAAATACCACATCTGTTGGAATGAAACCCAATATTGATAACACACCCTTATCTAAGAAAGCTTTGAGCCGCTACTCTTTGGTTTTTGATGCCATTTACACACCAAAGTTGACCAGGCTCCTGAGAGAAGCACAAGAGTCCGGAGCCATTATTGTTTATGGGACAGAGATGTTCATCAATCAAGCATTTGTACAGTTTGAAAGATTCACTGGTTTGCCCGCACCAAAAGAACTGATCAGGGAAGTTTTGGTGAGGAATACATAAGAACTTGTTGGGTTAGTTTCTCATTGCAGCTGGCACTATGGTCATCCATTACAGCTAACTCATTTCAATTTCTGATTCTTTGTGATTAGCTGCTGAGTTATGTTGTTGTATCAATAAATTTCCTTTTCATAATGAAAGAACTTGTGAGCATGTGCTAGGTCGCTCAATTATGGCATAGATACAGCAAAACACAAGAAAAGGGTTCATTTAGTCTACCCAAATTTTTGGGATTAATGAAGCTAGTGAG
CDS Sequence
- >Vitvi14g00338_t001
ATGACTCTCAGCAGCGTTCCGTTGGCTACTTCGGATATACAAATCCCAGAAGGAGCCCGGAGAAATTCGACGCTAATATGTGTTCCAATAATGGCGGATTCCGTGGATCAAATGTTGGGTCAGATAAGAAAGGCAAAAGAAGTTGGTGGTGACCTTGTGGAGATTCGGTTAGATTATTTGAAGAACTTCAGTCCTAGACAAGATCTCCAATTCTTAGTCAAACAATCTCCTTTGCCCACTCTTGTCACTTACAGACCAACATGGGAAGGTGGTCAGTATGACGGTGATGAAGGAAAGAGACTGGATGCGCTGCGCCTAGCCATTGAATTGGGAGCTGATTATATTGATGTTGAGCTTCAGGTAGCTCCTGAGTTCATCAATTCCATTCAGGGGAAAACATCTGGAAATGTCAAAATCATTGTTTCTTCTCACAACTACCAAAATTCTCCTTCTGCTGAGGAGCTTGGCAATCTTGTGGCAAGAATACAAGCTACTGGAGCTGACATAGTGAAGATTGCAACAACTGCTTTAGACATTACAGACTGTGCACGGATTTTTCAAGTGCTCGCACATTCCCAAGTCCCAACTATAGGAATTGCTATGGCAGAGAGGGGTTTAATTTCAAGGATACTTAGTGCCAAATTTGGTAGCTATCTCACTTTTGGTTCACTTGAGGCAGGAGTGGTGTCAGCTCCTGGGCAACCAACTGTAAAAGATTTGTTGGATTTATACAATTTCAGACAGATAGGACCTGATACGAAGGTGCATGGTGTCATTGGAAAGCCTATTGGTCACAGCAAGAGCCCTCATCTATACAACTCGGCATTTAAGTCAGTTGGCTTTAATGGAATTTATTTGCCTCTGTTGGTCGACAGTGTCAAAAATTTTCTCACCACCTATTCATCCCCTGATTTTGTTGGATACAGCTATACGATTCCTCACAAGGAGGATGGACTTAGATGCTGTGATGAGATCGATCCCATTGCCCAGGCAATAGGAGCTATTAGCTGCATGATTAGAAGACCGGCTGATGGGAAGCTAATGGGGTATAATGTCGACTATCTTGGAGCCATTGCAGCTATTGAGGAGGGACTACGAGCTTCAAATGGTACAACCAGTGTTGGCTCACCCTTAGCTGGAAAACTGTTTGTTGTCATTGGTGCTGGTGGTGCTGGAAAGGCACTTGCTTATGGTGGAAAAGAAAAGGGAGCAAGAGTAGTAGTGGCCAATCGCACATTTGAGAAAGCTAAAGAACTTGCAAGTAAAGTTGGGGGAGAGGCCATGACTCTTGCGGAATTAGAAAATTTCCATCCAGAAGATGGGATGATTCTTGCAAATACCACATCTGTTGGAATGAAACCCAATATTGATAACACACCCTTATCTAAGAAAGCTTTGAGCCGCTACTCTTTGGTTTTTGATGCCATTTACACACCAAAGTTGACCAGGCTCCTGAGAGAAGCACAAGAGTCCGGAGCCATTATTGTTTATGGGACAGAGATGTTCATCAATCAAGCATTTGTACAGTTTGAAAGATTCACTGGTTTGCCCGCACCAAAAGAACTGATCAGGGAAGTTTTGGTGAGGAATACATAA
Protein Sequence
- >Vitvi14g00338_P001
MTLSSVPLATSDIQIPEGARRNSTLICVPIMADSVDQMLGQIRKAKEVGGDLVEIRLDYLKNFSPRQDLQFLVKQSPLPTLVTYRPTWEGGQYDGDEGKRLDALRLAIELGADYIDVELQVAPEFINSIQGKTSGNVKIIVSSHNYQNSPSAEELGNLVARIQATGADIVKIATTALDITDCARIFQVLAHSQVPTIGIAMAERGLISRILSAKFGSYLTFGSLEAGVVSAPGQPTVKDLLDLYNFRQIGPDTKVHGVIGKPIGHSKSPHLYNSAFKSVGFNGIYLPLLVDSVKNFLTTYSSPDFVGYSYTIPHKEDGLRCCDEIDPIAQAIGAISCMIRRPADGKLMGYNVDYLGAIAAIEEGLRASNGTTSVGSPLAGKLFVVIGAGGAGKALAYGGKEKGARVVVANRTFEKAKELASKVGGEAMTLAELENFHPEDGMILANTTSVGMKPNIDNTPLSKKALSRYSLVFDAIYTPKLTRLLREAQESGAIIVYGTEMFINQAFVQFERFTGLPAPKELIREVLVRNT