Information report for VvDXS
Gene Details
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Functional Descriptions
- A structural gene of the plastidial methyl-erythritol-phosphate (MEP) pathway, 1-deoxy-D-xylulose 5-phosphate synthase (VvDXS), was recently suggested as a candidate gene for this trait, having been co-localized with a major quantitative trait locus for linalool, nerol, and geraniol concentrations in berries.
- The significance of this nucleotide difference was investigated by comparing the monoterpene profiles with the expression of VvDXS alleles throughout berry development in Moscato Bianco, a cultivar heterozygous for the SNP mutation.
- Although correlation was detected between the VvDXS transcript profile and the accumulation of free monoterpenol odorants, the modulation of VvDXS expression during berry development appears to be independent of nucleotide variation in the coding sequence.
- These findings confirm a functional effect of the VvDXS gene polymorphism and may pave the way for metabolic engineering of terpenoid contents in grapevine.
Functional Keywords
Literature and News
Homologs
- Arabidopsis thaliana: AT4G15560, AT3G21500
- Oryza sativa: CLA1;OsDXS1, OsDXS;OsDXS3
- Rosa chinensis: RchiOBHm_Chr5g0059241
Sequences
cDNA Sequence
- >Vitvi05g00372_t001
ATCAATCTTACCCAGACGAGTATTGGGTTTCTGTCCCTTTTTTTTTTTTTTGTTTGGTATTCACATCTCTCTACCACCAGCACCACCATTATCTCCACTACCGGGGAGTGGGGGAAGCACTGCTTTTTCTCTCTGTCTTTTCTGGATTGTTCTTGCTTTGGTCTGTGCTCAAGCTTCTGCATTTGCTGAGAGTTGAAATGGCTCTCTGTACGCTCTCATTTCCTGCCCATTTTAGCCAGGCTGCTGCTTCAAATCCTCAGAGACTTACTCCTCAGTGTTCCCATTTGTTCTTGGGGGTGGATTTGCAGTGCCAATCCCAGCAAAGGAGTAAGGCCAGGAAAAGGCCAAATGGGGTTTGTGCATCACTTTCGGATAGGGAGGAGTATCATTCCCAGAGACCACCAACTCCTCTCCTGGACACTATCAATTATCCAATTCACATGAAAAATCTGTCTGTCAAGGAGCTGAAACAACTCGCAGATGAACTAAGGTCTGATGTTGTCTTCAATGTTTCCAAAACTGGGGGTCACTTGGGCTCCAGCCTCGGGGTTGTGGAGCTCACTGTGGCTCTTCATTATGTCTTCAATGCCCCTCAAGACAGGATACTATGGGATGTTGGTCATCAGTCTTACCCACACAAAATTCTAACTGGGAGAAGAGATCAAATGCATACCATGAGGCAAACAGATGGGTTAGCGGGATTCACCAAGCGCTCGGAGAGTGAATATGACTGCTTTGGAACCGGCCACAGTTCTACTACCATCTCAGCAGGCTTGGGAATGGCGGTCGGCCGGGATCTAAAAGGAAAAAACAACAACGTTATTGCTGTCATAGGTGATGGAGCCATGACTGCAGGGCAAGCTTATGAAGCAATGAACAATGCTGGGTACCTGGATTCTGACATGATTGTTATCCTTAATGACAACAAGCAGGTTTCTTTACCCACTGCTACTCTAGATGGGCCCATACCACCTGTAGGAGCTTTGAGCAGTGCTCTTAGTAGGTTACAATCAAACAGACCTCTTAGAGAATTACGAGAGGTTGCCAAGGGCGTTACCAAACAGATTGGCGGACCGATGCATGAATTGGCTGCAAAAGTTGATGAATATGCTCGTGGGATGATCAGTGGTTCTGGATCAACACTTTTTGAAGAGCTTGGACTCTATTATATAGGTCCTGTTGATGGCCACAACATAGATGACCTTGTTGCCATTCTCAAGGAGGTTAAGAGTACCAAGACAACAGGTCCAGTTCTGATCCATGTTGTCACAGAGAAAGGCCGCGGATATCCATATGCTGAGAAAGCTGCAGATAAGTACCATGGAGTGACCAAGTTCGATCCTGCTACTGGAAAACAATTCAAATCCAGTGCTCCTACTCAGTCCTACACAACATATTTTGCAGAGGCTTTGATTGCAGAAGCAGAGGTGGACAAGGATATTGTTGCAATTCATGCAGCAATGGGGGGTGGAACGGGCTTGAATCTCTTCCATCGCCGGTTCCCCACACGATGCTTTGATGTTGGGATAGCAGAACAGCATGCTGTTACCTTTGCTGCTGGTCTAGCCTGTGAAGGCATTAAACCTTTTTGTGCAATCTACTCATCTTTCATGCAGAGAGCTTATGACCAGGTGGTGCATGATGTAGATTTGCAGAAGCTGCCAGTGAAATTTGCAATGGACAGAGCTGGGCTGGTTGGAGCAGATGGCCCAACACATTGCGGAGCTTTTGATGTCACTTTCATGGCTTGCCTTCCAAACATGGTGGTGATGGCTCCTGCTGATGAGGCCGAGCTTTTTCACATGGTGGCCACAGCTGCTGCCATAGATGACAGGCCCAGTTGTTTCCGGTACCCAAGAGGAAATGGGGTGGGTGTTGAACTGCCACCAGGGAACAAAGGCATTCCTATTGAGGTTGGAAGGGGCCGAATATTGATTGAGGGGGAGAGAGTTGCACTCTTGGGCTATGGAACAGCAGTACAGAGCTGTTTGGTTGCGTCTTCTTTGCTGGAACAACATGGCTTACGAATAACAGTCGCAGATGCCCGCTTCTGCAAACCATTGGACCATGCTCTTATTCGTAGCCTAGCAAAATCACATGAAGTTTTGATTACAGTAGAAGAAGGGTCAATTGGTGGTTTTGGGTCTCATGTTGCTCAGTTTTTGGCCCTTAATGGTCTTCTTGATGGCACAACAAAGTGGAGTCCCATGGTTCTTCCTGACCGGTACATAGACCATGGAGCGCCAGCAGACCAGTTGGCCATGGCGGGTCTGACACCATCTCATATTGCAGCAACAGTATTCAATATACTTGGACAAACAAGGGAGGCCCTGGAGATCATGTTATAGACAGATACATCAGCTTTTCATTCTCTCAACATTGTACAAATATAATATGAACTCTCAGAATTTAACCTTCTTCAATATAAAGAAATTGTGTCAGCAATAAGGCTTGAAAGTGCTTAATATAGAAATTGAATCTCCCTCAGATCTCAACTCTGAATATGAA
CDS Sequence
- >Vitvi05g00372_t001
ATGGCTCTCTGTACGCTCTCATTTCCTGCCCATTTTAGCCAGGCTGCTGCTTCAAATCCTCAGAGACTTACTCCTCAGTGTTCCCATTTGTTCTTGGGGGTGGATTTGCAGTGCCAATCCCAGCAAAGGAGTAAGGCCAGGAAAAGGCCAAATGGGGTTTGTGCATCACTTTCGGATAGGGAGGAGTATCATTCCCAGAGACCACCAACTCCTCTCCTGGACACTATCAATTATCCAATTCACATGAAAAATCTGTCTGTCAAGGAGCTGAAACAACTCGCAGATGAACTAAGGTCTGATGTTGTCTTCAATGTTTCCAAAACTGGGGGTCACTTGGGCTCCAGCCTCGGGGTTGTGGAGCTCACTGTGGCTCTTCATTATGTCTTCAATGCCCCTCAAGACAGGATACTATGGGATGTTGGTCATCAGTCTTACCCACACAAAATTCTAACTGGGAGAAGAGATCAAATGCATACCATGAGGCAAACAGATGGGTTAGCGGGATTCACCAAGCGCTCGGAGAGTGAATATGACTGCTTTGGAACCGGCCACAGTTCTACTACCATCTCAGCAGGCTTGGGAATGGCGGTCGGCCGGGATCTAAAAGGAAAAAACAACAACGTTATTGCTGTCATAGGTGATGGAGCCATGACTGCAGGGCAAGCTTATGAAGCAATGAACAATGCTGGGTACCTGGATTCTGACATGATTGTTATCCTTAATGACAACAAGCAGGTTTCTTTACCCACTGCTACTCTAGATGGGCCCATACCACCTGTAGGAGCTTTGAGCAGTGCTCTTAGTAGGTTACAATCAAACAGACCTCTTAGAGAATTACGAGAGGTTGCCAAGGGCGTTACCAAACAGATTGGCGGACCGATGCATGAATTGGCTGCAAAAGTTGATGAATATGCTCGTGGGATGATCAGTGGTTCTGGATCAACACTTTTTGAAGAGCTTGGACTCTATTATATAGGTCCTGTTGATGGCCACAACATAGATGACCTTGTTGCCATTCTCAAGGAGGTTAAGAGTACCAAGACAACAGGTCCAGTTCTGATCCATGTTGTCACAGAGAAAGGCCGCGGATATCCATATGCTGAGAAAGCTGCAGATAAGTACCATGGAGTGACCAAGTTCGATCCTGCTACTGGAAAACAATTCAAATCCAGTGCTCCTACTCAGTCCTACACAACATATTTTGCAGAGGCTTTGATTGCAGAAGCAGAGGTGGACAAGGATATTGTTGCAATTCATGCAGCAATGGGGGGTGGAACGGGCTTGAATCTCTTCCATCGCCGGTTCCCCACACGATGCTTTGATGTTGGGATAGCAGAACAGCATGCTGTTACCTTTGCTGCTGGTCTAGCCTGTGAAGGCATTAAACCTTTTTGTGCAATCTACTCATCTTTCATGCAGAGAGCTTATGACCAGGTGGTGCATGATGTAGATTTGCAGAAGCTGCCAGTGAAATTTGCAATGGACAGAGCTGGGCTGGTTGGAGCAGATGGCCCAACACATTGCGGAGCTTTTGATGTCACTTTCATGGCTTGCCTTCCAAACATGGTGGTGATGGCTCCTGCTGATGAGGCCGAGCTTTTTCACATGGTGGCCACAGCTGCTGCCATAGATGACAGGCCCAGTTGTTTCCGGTACCCAAGAGGAAATGGGGTGGGTGTTGAACTGCCACCAGGGAACAAAGGCATTCCTATTGAGGTTGGAAGGGGCCGAATATTGATTGAGGGGGAGAGAGTTGCACTCTTGGGCTATGGAACAGCAGTACAGAGCTGTTTGGTTGCGTCTTCTTTGCTGGAACAACATGGCTTACGAATAACAGTCGCAGATGCCCGCTTCTGCAAACCATTGGACCATGCTCTTATTCGTAGCCTAGCAAAATCACATGAAGTTTTGATTACAGTAGAAGAAGGGTCAATTGGTGGTTTTGGGTCTCATGTTGCTCAGTTTTTGGCCCTTAATGGTCTTCTTGATGGCACAACAAAGTGGAGTCCCATGGTTCTTCCTGACCGGTACATAGACCATGGAGCGCCAGCAGACCAGTTGGCCATGGCGGGTCTGACACCATCTCATATTGCAGCAACAGTATTCAATATACTTGGACAAACAAGGGAGGCCCTGGAGATCATGTTATAG
Protein Sequence
- >Vitvi05g00372_P001
MALCTLSFPAHFSQAAASNPQRLTPQCSHLFLGVDLQCQSQQRSKARKRPNGVCASLSDREEYHSQRPPTPLLDTINYPIHMKNLSVKELKQLADELRSDVVFNVSKTGGHLGSSLGVVELTVALHYVFNAPQDRILWDVGHQSYPHKILTGRRDQMHTMRQTDGLAGFTKRSESEYDCFGTGHSSTTISAGLGMAVGRDLKGKNNNVIAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNIDDLVAILKEVKSTKTTGPVLIHVVTEKGRGYPYAEKAADKYHGVTKFDPATGKQFKSSAPTQSYTTYFAEALIAEAEVDKDIVAIHAAMGGGTGLNLFHRRFPTRCFDVGIAEQHAVTFAAGLACEGIKPFCAIYSSFMQRAYDQVVHDVDLQKLPVKFAMDRAGLVGADGPTHCGAFDVTFMACLPNMVVMAPADEAELFHMVATAAAIDDRPSCFRYPRGNGVGVELPPGNKGIPIEVGRGRILIEGERVALLGYGTAVQSCLVASSLLEQHGLRITVADARFCKPLDHALIRSLAKSHEVLITVEEGSIGGFGSHVAQFLALNGLLDGTTKWSPMVLPDRYIDHGAPADQLAMAGLTPSHIAATVFNILGQTREALEIML