Gene Details:
- Gene ID: TraesCS3A02G526600
- Gene Symbol: WPCL1-3A
- Gene Name: WHEAT PHYTOCLOCK 1
- Genome: Chinese_Spring1.0
- Species: Triticum aestivum
Functional Descriptions:
- Presumptive loss-of-function mutations in all WPCL1 homoeologous genes were found in ‘Chogokuwase’ and ‘Geurumil’, one of the parental cultivars.
- Our observations indicated that loss-of-function mutations in the clock gene wpcl1 are necessary but are not sufficient to explain the extra-early heading of ‘Chogokuwase’.
- We discuss the function of WPCL1 in the photoperiod and vernalization pathways of the wheat flowering gene network.
- Loss-of-function mutations in WPCL1 reduce photoperiod sensitivity by up-regulating Ppd-1.
- WPCL1 affects the vernalization requirement through Vrn-2.
Function-related keywords:
Literature:
- Loss-of-Function Mutations in Three Homoeologous PHYTOCLOCK 1 Genes in Common Wheat Are Associated with the Extra-Early Flowering Phenotype. DOI: 10.1371/journal.pone.0165618 ; PMID: 27788250
Related News:
Gene Resources:
Sequences:
cDNA Sequence
- >TraesCS3A02G526600.1
ACCCCGCCCCACAAAAATATCTTCTTTCTTCCCCTGCCTAGCTAGGCCGCCGGAGTTAGCCCGGCAGGTAACAACTAGATGATACGCAGATGGCGAGGGTAAGCCTTCTGCTCATCGGGTGATTCGTCGGATTGGGGCTGAGAGCTTCGGTTGGGTTGGGTTGAATTTTCTGGGTTCTTGATCGGGTTGGGGATCCAATCCAATCCATGGGGGAGGAGGCCGGCGGCTACGGTTTTGACTTCGGGGGAGGGGGCGGCGGCTATGGAGGGTACGACGGGAGGGTCACGGAGTGGGAGACGGGCCTGCCGGGGTGCGACGAGCTGACCCCGCTCTCGCAGCCGCTGGTGCCGCCGGGGCTCGCCGCGGCGTTCCGCATCCCGCCGGAGCCGGGGCGGACTCTTCTCGACGTGCACCGCGCGTCCTCCGCCACCGTGTCCCGCCTCCGCTCCACCTCCTCGTCCCCCTCCTCCGGCAACGGCCACGCCGGCACCCACGCCAACGGCGGCTCCTTCCCCTCCTTCCCCGGCAAGGGGGCGGCGGCGGGGGACGACAGCGGCAACCGGGACAACAACTCTGCCGAGTCGGCCGGGGAGAAGGCGGCGGCGACGAAGCGGGCGCGGCTGGTGTGGACGCCGCAGCTGCACAAGCGGTTCGTGGAGGTGGTGGCGCACCTGGGGATCAAGAGCGCGGTGCCCAAGACCATCATGCAGCTGATGAACGTGGAGGGCCTCACCCGCGAGAACGTCGCCAGCCACCTCCAGAAGTACCGCCTCTACGTCAAGCGGATGCAGGGCCTCTCCAACGAGGGGCCCTCCGCCTCCGACCACATCTTCGCGTCCACGCCCGTGCCGCCCAGCCTGCGCGAGCCCCAGGTGCCGCACGCCGCCGCCATGGCCCCCGCCATGTACCACCACCACCCGGCCCCCATGGGCGGCGTCGCCGCCGGCCACGGCGGGTACTACCAGCAGCAGCACAGCGGCCACGCCGTCTACAACGGGTACGGCGGCCACGGCCACGGCGGCGGCGTCTCCTCCTACCCGCACTACCACCACGGCGACCAGTAAGGATAACCATCCATCCCGGATTCAGTCATCAACAGATGCTCTGCTCTCTCTGCTTGTGTATGTGTTTGGTCCTGCTCATCAGTCAGTCAACAGATGTTGTAATTGTAACCTGTAATCAGTCGGTCAGTCAGTGCATGATCCATCGTCAGTCTAGCGTAGGTGTGTGTCCATCAGTCAAAGAGTTTACAGCTGCGGCTGGACATAATTGTTATGAAGAAGAAGAAGAAGATTAATTAACAAGGGGAGCTGAAGTGAAGTTCCCGGGGTAAGAAGAAGATTAGCAATACGAAGAAGAGAGTTACAGAGTGTGTGCTCTGTTTGTGTATGTATGTAATACTGCTGCTGTAACTTCGAATCTTGAACTGCTGCCCCCATTTTGGGCAGTGGCAAGATGATCATAATATGAAGCCCAAAAAGGGAATTATGATTGTGATCTTGTGCT
CDS Sequence
- >TraesCS3A02G526600.1
ATGGGGGAGGAGGCCGGCGGCTACGGTTTTGACTTCGGGGGAGGGGGCGGCGGCTATGGAGGGTACGACGGGAGGGTCACGGAGTGGGAGACGGGCCTGCCGGGGTGCGACGAGCTGACCCCGCTCTCGCAGCCGCTGGTGCCGCCGGGGCTCGCCGCGGCGTTCCGCATCCCGCCGGAGCCGGGGCGGACTCTTCTCGACGTGCACCGCGCGTCCTCCGCCACCGTGTCCCGCCTCCGCTCCACCTCCTCGTCCCCCTCCTCCGGCAACGGCCACGCCGGCACCCACGCCAACGGCGGCTCCTTCCCCTCCTTCCCCGGCAAGGGGGCGGCGGCGGGGGACGACAGCGGCAACCGGGACAACAACTCTGCCGAGTCGGCCGGGGAGAAGGCGGCGGCGACGAAGCGGGCGCGGCTGGTGTGGACGCCGCAGCTGCACAAGCGGTTCGTGGAGGTGGTGGCGCACCTGGGGATCAAGAGCGCGGTGCCCAAGACCATCATGCAGCTGATGAACGTGGAGGGCCTCACCCGCGAGAACGTCGCCAGCCACCTCCAGAAGTACCGCCTCTACGTCAAGCGGATGCAGGGCCTCTCCAACGAGGGGCCCTCCGCCTCCGACCACATCTTCGCGTCCACGCCCGTGCCGCCCAGCCTGCGCGAGCCCCAGGTGCCGCACGCCGCCGCCATGGCCCCCGCCATGTACCACCACCACCCGGCCCCCATGGGCGGCGTCGCCGCCGGCCACGGCGGGTACTACCAGCAGCAGCACAGCGGCCACGCCGTCTACAACGGGTACGGCGGCCACGGCCACGGCGGCGGCGTCTCCTCCTACCCGCACTACCACCACGGCGACCAGTAA
Protein Sequence
- >TraesCS3A02G526600.1.cds1
MGEEAGGYGFDFGGGGGGYGGYDGRVTEWETGLPGCDELTPLSQPLVPPGLAAAFRIPPEPGRTLLDVHRASSATVSRLRSTSSSPSSGNGHAGTHANGGSFPSFPGKGAAAGDDSGNRDNNSAESAGEKAAATKRARLVWTPQLHKRFVEVVAHLGIKSAVPKTIMQLMNVEGLTRENVASHLQKYRLYVKRMQGLSNEGPSASDHIFASTPVPPSLREPQVPHAAAMAPAMYHHHPAPMGGVAAGHGGYYQQQHSGHAVYNGYGGHGHGGGVSSYPHYHHGDQ