Information report for WPCL1-3A
Gene Details
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Functional Descriptions
- Presumptive loss-of-function mutations in all WPCL1 homoeologous genes were found in ‘Chogokuwase’ and ‘Geurumil’, one of the parental cultivars.
- Our observations indicated that loss-of-function mutations in the clock gene wpcl1 are necessary but are not sufficient to explain the extra-early heading of ‘Chogokuwase’.
- We discuss the function of WPCL1 in the photoperiod and vernalization pathways of the wheat flowering gene network.
- Loss-of-function mutations in WPCL1 reduce photoperiod sensitivity by up-regulating Ppd-1.
- WPCL1 affects the vernalization requirement through Vrn-2.
Functional Keywords
Literature and News
Gene Resources
- NCBI ID: KF769443
- UniProt accessions: W0M071
- EMBL: LC145079
- EnsemblPlants: TraesCS3A02G526600.1
- Gramene: TraesCS3A02G526600.1
- GO: GO:0003677 , GO:0003700 , GO:0005634
- OMA: PQAYHHA
- ExpressionAtlas: TraesCS3A02G526600
- InterPro: IPR001005 , IPR006447 , IPR009057
- PANTHER: PTHR31442 , PTHR31442:SF21
- SUPFAM: SSF46689
- PROSITE: PS51294
- Gene3D: 1.10.10.60
- OrthoDB: W0M071
- SMR: W0M071
Sequences
cDNA Sequence
- >TraesCS3A02G526600.1
ACCCCGCCCCACAAAAATATCTTCTTTCTTCCCCTGCCTAGCTAGGCCGCCGGAGTTAGCCCGGCAGGTAACAACTAGATGATACGCAGATGGCGAGGGTAAGCCTTCTGCTCATCGGGTGATTCGTCGGATTGGGGCTGAGAGCTTCGGTTGGGTTGGGTTGAATTTTCTGGGTTCTTGATCGGGTTGGGGATCCAATCCAATCCATGGGGGAGGAGGCCGGCGGCTACGGTTTTGACTTCGGGGGAGGGGGCGGCGGCTATGGAGGGTACGACGGGAGGGTCACGGAGTGGGAGACGGGCCTGCCGGGGTGCGACGAGCTGACCCCGCTCTCGCAGCCGCTGGTGCCGCCGGGGCTCGCCGCGGCGTTCCGCATCCCGCCGGAGCCGGGGCGGACTCTTCTCGACGTGCACCGCGCGTCCTCCGCCACCGTGTCCCGCCTCCGCTCCACCTCCTCGTCCCCCTCCTCCGGCAACGGCCACGCCGGCACCCACGCCAACGGCGGCTCCTTCCCCTCCTTCCCCGGCAAGGGGGCGGCGGCGGGGGACGACAGCGGCAACCGGGACAACAACTCTGCCGAGTCGGCCGGGGAGAAGGCGGCGGCGACGAAGCGGGCGCGGCTGGTGTGGACGCCGCAGCTGCACAAGCGGTTCGTGGAGGTGGTGGCGCACCTGGGGATCAAGAGCGCGGTGCCCAAGACCATCATGCAGCTGATGAACGTGGAGGGCCTCACCCGCGAGAACGTCGCCAGCCACCTCCAGAAGTACCGCCTCTACGTCAAGCGGATGCAGGGCCTCTCCAACGAGGGGCCCTCCGCCTCCGACCACATCTTCGCGTCCACGCCCGTGCCGCCCAGCCTGCGCGAGCCCCAGGTGCCGCACGCCGCCGCCATGGCCCCCGCCATGTACCACCACCACCCGGCCCCCATGGGCGGCGTCGCCGCCGGCCACGGCGGGTACTACCAGCAGCAGCACAGCGGCCACGCCGTCTACAACGGGTACGGCGGCCACGGCCACGGCGGCGGCGTCTCCTCCTACCCGCACTACCACCACGGCGACCAGTAAGGATAACCATCCATCCCGGATTCAGTCATCAACAGATGCTCTGCTCTCTCTGCTTGTGTATGTGTTTGGTCCTGCTCATCAGTCAGTCAACAGATGTTGTAATTGTAACCTGTAATCAGTCGGTCAGTCAGTGCATGATCCATCGTCAGTCTAGCGTAGGTGTGTGTCCATCAGTCAAAGAGTTTACAGCTGCGGCTGGACATAATTGTTATGAAGAAGAAGAAGAAGATTAATTAACAAGGGGAGCTGAAGTGAAGTTCCCGGGGTAAGAAGAAGATTAGCAATACGAAGAAGAGAGTTACAGAGTGTGTGCTCTGTTTGTGTATGTATGTAATACTGCTGCTGTAACTTCGAATCTTGAACTGCTGCCCCCATTTTGGGCAGTGGCAAGATGATCATAATATGAAGCCCAAAAAGGGAATTATGATTGTGATCTTGTGCT
CDS Sequence
- >TraesCS3A02G526600.1
ATGGGGGAGGAGGCCGGCGGCTACGGTTTTGACTTCGGGGGAGGGGGCGGCGGCTATGGAGGGTACGACGGGAGGGTCACGGAGTGGGAGACGGGCCTGCCGGGGTGCGACGAGCTGACCCCGCTCTCGCAGCCGCTGGTGCCGCCGGGGCTCGCCGCGGCGTTCCGCATCCCGCCGGAGCCGGGGCGGACTCTTCTCGACGTGCACCGCGCGTCCTCCGCCACCGTGTCCCGCCTCCGCTCCACCTCCTCGTCCCCCTCCTCCGGCAACGGCCACGCCGGCACCCACGCCAACGGCGGCTCCTTCCCCTCCTTCCCCGGCAAGGGGGCGGCGGCGGGGGACGACAGCGGCAACCGGGACAACAACTCTGCCGAGTCGGCCGGGGAGAAGGCGGCGGCGACGAAGCGGGCGCGGCTGGTGTGGACGCCGCAGCTGCACAAGCGGTTCGTGGAGGTGGTGGCGCACCTGGGGATCAAGAGCGCGGTGCCCAAGACCATCATGCAGCTGATGAACGTGGAGGGCCTCACCCGCGAGAACGTCGCCAGCCACCTCCAGAAGTACCGCCTCTACGTCAAGCGGATGCAGGGCCTCTCCAACGAGGGGCCCTCCGCCTCCGACCACATCTTCGCGTCCACGCCCGTGCCGCCCAGCCTGCGCGAGCCCCAGGTGCCGCACGCCGCCGCCATGGCCCCCGCCATGTACCACCACCACCCGGCCCCCATGGGCGGCGTCGCCGCCGGCCACGGCGGGTACTACCAGCAGCAGCACAGCGGCCACGCCGTCTACAACGGGTACGGCGGCCACGGCCACGGCGGCGGCGTCTCCTCCTACCCGCACTACCACCACGGCGACCAGTAA
Protein Sequence
- >TraesCS3A02G526600.1.cds1
MGEEAGGYGFDFGGGGGGYGGYDGRVTEWETGLPGCDELTPLSQPLVPPGLAAAFRIPPEPGRTLLDVHRASSATVSRLRSTSSSPSSGNGHAGTHANGGSFPSFPGKGAAAGDDSGNRDNNSAESAGEKAAATKRARLVWTPQLHKRFVEVVAHLGIKSAVPKTIMQLMNVEGLTRENVASHLQKYRLYVKRMQGLSNEGPSASDHIFASTPVPPSLREPQVPHAAAMAPAMYHHHPAPMGGVAAGHGGYYQQQHSGHAVYNGYGGHGHGGGVSSYPHYHHGDQ