Gene Details:
- Gene ID: TraesCS5D02G401500
- Gene Symbol: TaVRN1-D1
- Gene Name: MADS-box protein TaVRT-1
- Genome: Chinese_Spring1.0
- Species: Triticum aestivum
Functional Descriptions:
- The vernalization gene TaVRN1 is among the positive dosage effect genes in the T. durum‒H. villosa and T. turgidum‒Ae. tauschii amphiploids.
- The expression levels of TaVRN1 homologs are positively correlated with the grain size and weight.
- The TaVRN1-B1 or TaVRN1-D1 mutation shows delayed florescence, decreased cell size, grain size, and grain yield.
- TaVRN1, that played a positive role in regulating grain size.
Function-related keywords:
- grain , grain-size , grain-yield , yield , grain-weight , vernalization
Literature:
- Dosage effect genes modulate grain development in synthesized Triticum durum-Haynaldia villosa allohexaploid. DOI: 10.1016/j.jgg.2024.04.010 ; PMID: 38670432
Related News:
Gene Resources:
- NCBI ID: AY616454.1
- UniProt accessions: Q5YA48
Orthologs:
Sequences:
cDNA Sequence
- >TraesCS5D02G401500.1
AGCCCGGTATTGCATACCGCGCTCGGGGCCAGATCCCTTTAAAAACCCCTCCCCCCCTGCCGGAACCCTCGTTTTGGCCTGGCCATCCTCCCTCTCCTCCCCCTCTCTTCCAACCACCTGACAGCCATGGCTCCGCCCCCTCGCCTCCGCCTGCGCCTGTCGGAGTAGCCGTCGCGGTCTGCCGGTGTTGGAGGGTAGGGGCGTAGGGTTGGCCCGGTTCTCGAGCGGAGATGGGGCGCGGGAAGGTGCAGCTGAAGCGGATCGAGAACAAGATCAACCGGCAGGTGACCTTCTCCAAGCGCCGCTCGGGGCTGCTCAAGAAGGCGCACGAGATCTCCGTGCTCTGCGACGCCGAGGTCGGCCTCATCATCTTCTCCACCAAGGGAAAGCTCTACGAGTTCTCCACCGAGTCATGTATGGACAAAATTCTTGAACGGTATGAGCGCTACTCTTATGCAGAAAAGGTTCTCGTTTCAAGTGAATCTGAAATTCAGGGAAACTGGTGTCACGAATATAGGAAACTGAAGGCGAAGGTTGAGACAATACAGAAATGTCAAAAGCATCTGATGGGAGAGGATCTTGAATCTTTGAATCTCAAGGAGTTGCAGCAACTGGAGCAGCAGCTGGAAAGCTCACTGAAACATATCAGATCCAGGAAGAACCAACTTATGCACGAATCCATTTCTGAGCTTCAGAAGAAGGTAAGCTGCCAACCTTGCATACCTGAACCGGAGAGGTCACTGCAGGAGGAGAATAAAGTTCTCCAGAAGGAACTCGTCGAGAAGCAGAAGGCCCAGGCGGCGCAACAAGATCAGACTCAGCCTCAAACAAGCTCTTCTTCTTCTTCCTTCATGATGAGGGATGCTCCCCCTGCCGCAGCTACCAGCATTCATCCAGCGGCGGCAGGCGAGAGGGCAGGGGATGCGGCAGTGCAGCCGCAGGCCCCACCCCGGACGGGGCTTCCACTGTGGATGGTGAGCCACATCAACGGCTGAAGGGCTTCCAGCCCATATAAGCGTACTATTCAGTAGAGAGTAACAAGTTGCACCGGCCAGTCTGGTGTATGTTGCGGTTGCTAGCACGCCTGACCCCTTGGAGGGGAAAGGAAAAGAAATCAGAGTAAAGTAGCAAGCTGCAGCGATGTGTATATTTCACTTTGTCCACCCCAGTTTCCCTCCCAGCTGGGCTCAATTTACCATGTAATCTATATGTAGCTTGAGTGATGAATTTTCAAGTTTCCATGATACCCGTCTCTAGTGGGATGTTGTTTATGTGAATTAACCTATCAAATATGAGCATTGTGTATATTGTGATTCTTGAAAATAAATAAATCAGGATCTTTGTCTTCGT - >TraesCS5D02G401500.2
AGCCCGGTATTGCATACCGCGCTCGGGGCCAGATCCCTTTAAAAACCCCTCCCCCCCTGCCGGAACCCTCGTTTTGGCCTGGCCATCCTCCCTCTCCTCCCCCTCTCTTCCAACCACCTGACAGCCATGGCTCCGCCCCCTCGCCTCCGCCTGCGCCTGTCGGAGTAGCCGTCGCGGTCTGCCGGTGTTGGAGGGTAGGGGCGTAGGGTTGGCCCGGTTCTCGAGCGGAGATGGGGCGCGGGAAGGTGCAGCTGAAGCGGATCGAGAACAAGATCAACCGGCAGGTGACCTTCTCCAAGCGCCGCTCGGGGCTGCTCAAGAAGGCGCACGAGATCTCCGTGCTCTGCGACGCCGAGGTCGGCCTCATCATCTTCTCCACCAAGGGAAAGCTCTACGAGTTCTCCACCGAGTCATGTATGGACAAAATTCTTGAACGGTATGAGCGCTACTCTTATGCAGAAAAGGTTCTCGTTTCAAGTGAATCTGAAATTCAGGGAAACTGGTGTCACGAATATAGGAAACTGAAGGCGAAGGTTGAGACAATACAGAAATGTCAAAAGCATCTGATGGGAGAGGATCTTGAATCTTTGAATCTCAAGGAGTTGCAGCAACTGGAGCAGCAGCTGGAAAGCTCACTGAAACATATCAGATCCAGGAAGAACCAACTTATGCACGAATCCATTTCTGAGCTTCAGAAGAAGGTAAGCTGCCAACCTTGCATACCTGAACCGGAGAGGTCACTGCAGGAGGAGAATAAAGTTCTCCAGAAGGAACTCGTCGAGAAGCAGAAGGCCCAGGCGGCGCAACAAGATCAGACTCAGCCTCAAACAAGCTCTTCTTCTTCTTCCTTCATGATGAGGGATGCTCCCCCTGCCGCAGCTACCAGCATTCATCCAGCGGCGGCAGGCGAGAGGGCAGGGGATGCGGCAGTGCAGCCGCAGGCCCCACCCCGGACGGGGCTTCCACTGTGGATGGTGAGCCACATCAACGGCTGAAGGGCTTCCAGCCCATATAAGCGTACTATTCAGTAGAGAGTAACAAGTTGCACCGGCCAGTCTGGTGTATGTTGCGGTTGCTAGCACGCCTGACCCCTTGGAGGGGAAAGGAAAAGAAATCAGAGTAAAGTAGCAAGCTGCAGCGATGTGTATATTTCACTTTGTCCACCCCAGTTTCCCTCCCAGCTGGGCTCAATTTACCATGTAATCTATATGTAGCTTGAGTGATGAATTTTCAAGTTTCCATGATACCCGTCTCTAGTGGGATGTTGTTTATGTGAATTAACCTATCAAATATGAGCATTGTGTATATTGTGATTCTTGAAAATAAATAAATCAGGATCTTTGTCTTCGT - >TraesCS5D02G401500.3
AGCCCGGTATTGCATACCGCGCTCGGGGCCAGATCCCTTTAAAAACCCCTCCCCCCCTGCCGGAACCCTCGTTTTGGCCTGGCCATCCTCCCTCTCCTCCCCCTCTCTTCCAACCACCTGACAGCCATGGCTCCGCCCCCTCGCCTCCGCCTGCGCCTGTCGGAGTAGCCGTCGCGGTCTGCCGGTGTTGGAGGGTAGGGGCGTAGGGTTGGCCCGGTTCTCGAGCGGAGATGGGGCGCGGGAAGGTGCAGCTGAAGCGGATCGAGAACAAGATCAACCGGCAGGTGACCTTCTCCAAGCGCCGCTCGGGGCTGCTCAAGAAGGCGCACGAGATCTCCGTGCTCTGCGACGCCGAGGTCGGCCTCATCATCTTCTCCACCAAGGGAAAGCTCTACGAGTTCTCCACCGAGTCATGTATGGACAAAATTCTTGAACGGTATGAGCGCTACTCTTATGCAGAAAAGGTTCTCGTTTCAAGTGAATCTGAAATTCAGGGAAACTGGTGTCACGAATATAGGAAACTGAAGGCGAAGGTTGAGACAATACAGAAATGTCAAAAGCATCTGATGGGAGAGGATCTTGAATCTTTGAATCTCAAGGAGTTGCAGCAACTGGAGCAGCAGCTGGAAAGCTCACTGAAACATATCAGATCCAGGAAGAACCAACTTATGCACGAATCCATTTCTGAGCTTCAGAAGAAGGTAAGCTGCCAACCTTGCATACCTGAACCGGAGAGGTCACTGCAGGAGGAGAATAAAGTTCTCCAGAAGGAACTCGTCGAGAAGCAGAAGGCCCAGGCGGCGCAACAAGATCAGACTCAGCCTCAAACAAGCTCTTCTTCTTCTTCCTTCATGATGAGGGATGCTCCCCCTGCCGCAGCTACCAGCATTCATCCAGCGGCGGCAGGCGAGAGGGCAGGGGATGCGGCAGTGCAGCCGCAGGCCCCACCCCGGACGGGGCTTCCACTGTGGATGGTGAGCCACATCAACGGCTGAAGGGCTTCCAGCCCATATAAGCGTACTATTCAGTAGAGAGTAACAAGTTGCACCGGCCAGTCTGGTGTATGTTGCGGTTGCTAGCACGCCTGACCCCTTGGAGGGGAAAGGAAAAGAAATCAGAGTAAAGTAGCAAGCTGCAGCGATGTGTATATTTCACTTTGTCCACCCCAGTTTCCCTCCCAGCTGGGCTCAATTTACCATGTAATCTATATGTAGCTTGAGTGATGAATTTTCAAGTTTCCATGATACCCGTCTCTAGTGGGATGTTGTTTATGTGAATTAACCTATCAAATATGAGCATTGTGTATATTGTGATTCTTGAAAATAAATAAATCAGGATCTTTGTCTTCGT
CDS Sequence
- >TraesCS5D02G401500.1
ATGGGGCGCGGGAAGGTGCAGCTGAAGCGGATCGAGAACAAGATCAACCGGCAGGTGACCTTCTCCAAGCGCCGCTCGGGGCTGCTCAAGAAGGCGCACGAGATCTCCGTGCTCTGCGACGCCGAGGTCGGCCTCATCATCTTCTCCACCAAGGGAAAGCTCTACGAGTTCTCCACCGAGTCATGTATGGACAAAATTCTTGAACGGTATGAGCGCTACTCTTATGCAGAAAAGGTTCTCGTTTCAAGTGAATCTGAAATTCAGGGAAACTGGTGTCACGAATATAGGAAACTGAAGGCGAAGGTTGAGACAATACAGAAATGTCAAAAGCATCTGATGGGAGAGGATCTTGAATCTTTGAATCTCAAGGAGTTGCAGCAACTGGAGCAGCAGCTGGAAAGCTCACTGAAACATATCAGATCCAGGAAGAACCAACTTATGCACGAATCCATTTCTGAGCTTCAGAAGAAGGTAAGCTGCCAACCTTGCATACCTGAACCGGAGAGGTCACTGCAGGAGGAGAATAAAGTTCTCCAGAAGGAACTCGTCGAGAAGCAGAAGGCCCAGGCGGCGCAACAAGATCAGACTCAGCCTCAAACAAGCTCTTCTTCTTCTTCCTTCATGATGAGGGATGCTCCCCCTGCCGCAGCTACCAGCATTCATCCAGCGGCGGCAGGCGAGAGGGCAGGGGATGCGGCAGTGCAGCCGCAGGCCCCACCCCGGACGGGGCTTCCACTGTGGATGGTGAGCCACATCAACGGCTGA - >TraesCS5D02G401500.2
ATGGGGCGCGGGAAGGTGCAGCTGAAGCGGATCGAGAACAAGATCAACCGGCAGGTGACCTTCTCCAAGCGCCGCTCGGGGCTGCTCAAGAAGGCGCACGAGATCTCCGTGCTCTGCGACGCCGAGGTCGGCCTCATCATCTTCTCCACCAAGGGAAAGCTCTACGAGTTCTCCACCGAGTCATGTATGGACAAAATTCTTGAACGGTATGAGCGCTACTCTTATGCAGAAAAGGTTCTCGTTTCAAGTGAATCTGAAATTCAGGGAAACTGGTGTCACGAATATAGGAAACTGAAGGCGAAGGTTGAGACAATACAGAAATGTCAAAAGCATCTGATGGGAGAGGATCTTGAATCTTTGAATCTCAAGGAGTTGCAGCAACTGGAGCAGCAGCTGGAAAGCTCACTGAAACATATCAGATCCAGGAAGAACCAACTTATGCACGAATCCATTTCTGAGCTTCAGAAGAAGGTAAGCTGCCAACCTTGCATACCTGAACCGGAGAGGTCACTGCAGGAGGAGAATAAAGTTCTCCAGAAGGAACTCGTCGAGAAGCAGAAGGCCCAGGCGGCGCAACAAGATCAGACTCAGCCTCAAACAAGCTCTTCTTCTTCTTCCTTCATGATGAGGGATGCTCCCCCTGCCGCAGCTACCAGCATTCATCCAGCGGCGGCAGGCGAGAGGGCAGGGGATGCGGCAGTGCAGCCGCAGGCCCCACCCCGGACGGGGCTTCCACTGTGGATGGTGAGCCACATCAACGGCTGA - >TraesCS5D02G401500.3
ATGGGGCGCGGGAAGGTGCAGCTGAAGCGGATCGAGAACAAGATCAACCGGCAGGTGACCTTCTCCAAGCGCCGCTCGGGGCTGCTCAAGAAGGCGCACGAGATCTCCGTGCTCTGCGACGCCGAGGTCGGCCTCATCATCTTCTCCACCAAGGGAAAGCTCTACGAGTTCTCCACCGAGTCATGTATGGACAAAATTCTTGAACGGTATGAGCGCTACTCTTATGCAGAAAAGGTTCTCGTTTCAAGTGAATCTGAAATTCAGGGAAACTGGTGTCACGAATATAGGAAACTGAAGGCGAAGGTTGAGACAATACAGAAATGTCAAAAGCATCTGATGGGAGAGGATCTTGAATCTTTGAATCTCAAGGAGTTGCAGCAACTGGAGCAGCAGCTGGAAAGCTCACTGAAACATATCAGATCCAGGAAGAACCAACTTATGCACGAATCCATTTCTGAGCTTCAGAAGAAGGTAAGCTGCCAACCTTGCATACCTGAACCGGAGAGGTCACTGCAGGAGGAGAATAAAGTTCTCCAGAAGGAACTCGTCGAGAAGCAGAAGGCCCAGGCGGCGCAACAAGATCAGACTCAGCCTCAAACAAGCTCTTCTTCTTCTTCCTTCATGATGAGGGATGCTCCCCCTGCCGCAGCTACCAGCATTCATCCAGCGGCGGCAGGCGAGAGGGCAGGGGATGCGGCAGTGCAGCCGCAGGCCCCACCCCGGACGGGGCTTCCACTGTGGATGGTGAGCCACATCAACGGCTGA
Protein Sequence
- >TraesCS5D02G401500.1
MGRGKVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVGLIIFSTKGKLYEFSTESCMDKILERYERYSYAEKVLVSSESEIQGNWCHEYRKLKAKVETIQKCQKHLMGEDLESLNLKELQQLEQQLESSLKHIRSRKNQLMHESISELQKKVSCQPCIPEPERSLQEENKVLQKELVEKQKAQAAQQDQTQPQTSSSSSSFMMRDAPPAAATSIHPAAAGERAGDAAVQPQAPPRTGLPLWMVSHING - >TraesCS5D02G401500.2
MGRGKVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVGLIIFSTKGKLYEFSTESCMDKILERYERYSYAEKVLVSSESEIQGNWCHEYRKLKAKVETIQKCQKHLMGEDLESLNLKELQQLEQQLESSLKHIRSRKNQLMHESISELQKKVSCQPCIPEPERSLQEENKVLQKELVEKQKAQAAQQDQTQPQTSSSSSSFMMRDAPPAAATSIHPAAAGERAGDAAVQPQAPPRTGLPLWMVSHING - >TraesCS5D02G401500.3
MGRGKVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVGLIIFSTKGKLYEFSTESCMDKILERYERYSYAEKVLVSSESEIQGNWCHEYRKLKAKVETIQKCQKHLMGEDLESLNLKELQQLEQQLESSLKHIRSRKNQLMHESISELQKKVSCQPCIPEPERSLQEENKVLQKELVEKQKAQAAQQDQTQPQTSSSSSSFMMRDAPPAAATSIHPAAAGERAGDAAVQPQAPPRTGLPLWMVSHING