Information report for TaVRN1-B1
Gene Details
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Functional Descriptions
- The vernalization gene TaVRN1 is among the positive dosage effect genes in the T. durum‒H. villosa and T. turgidum‒Ae. tauschii amphiploids.
- The expression levels of TaVRN1 homologs are positively correlated with the grain size and weight.
- The TaVRN1-B1 or TaVRN1-D1 mutation shows delayed florescence, decreased cell size, grain size, and grain yield.
- TaVRN1, that played a positive role in regulating grain size.
Functional Keywords
- grain , grain-size , grain-yield , yield , grain-weight , vernalization
Literature and News
Gene Resources
- NCBI ID: AY280870.1
- UniProt accessions: Q84LI3
- EMBL: AY747603 , AY747604 , HQ130482 , HQ130483
- EnsemblPlants: TraesCS5B02G396600.1
- Gramene: TraesCS5B02G396600.1
- GO: GO:0000977 , GO:0003700 , GO:0005634
- OMA: HLGCFTT
- ExpressionAtlas: TraesCS5B02G396600
- InterPro: IPR002100 , IPR002487 , IPR033896 , IPR036879 , IPR050142
- PANTHER: PTHR48019
- SUPFAM: SSF55455
- PROSITE: PS00350 , PS50066 , PS51297
- Gene3D: 3.40.1810.10
- OrthoDB: Q84LI3
- SMR: Q84LI3
- CDD: cd00265
Sequences
cDNA Sequence
- >TraesCS5B02G396600.2
GTTTTGGCCTGGCCATCCTCCCTCTCCTCCCTCTCTTCCGCCTCACCCAACCACCTGACAGCCATGGCTCCGCCCCCCCGCCCCCGCCTGCGCCTGTCGGAGTAGCCGTCGCGGTCTGCCGGTGTTGGAGGCTTGGGGTGTAGGGTTGGCCCCGTTCTCCAGCGGAGATGGGGCGCGGGAAGGTGCAGCTGAAGCGGATCGAGAACAAGATCAACCGGCAGGTGACCTTCTCCAAGCGCCGCTCGGGGCTGCTCAAGAAGGCGCACGAGATCTCCGTGCTCTGCGACGCCGAGGTCGGCCTCATCATCTTCTCCACCAAGGGAAAGCTCTACGAGTTCTCCACCGAGTCATGTATGGACAAAATTCTTGAACGGTATGAGCGCTACTCTTATGCAGAAAAGGTTCTCGTTTCAAGTGAATCTGAAATTCAGGGAAACTGGTGTCACGAATATAGGAAACTGAAGGCGAAGGTTGAGACAATACAGAAATGTCAAAAGCATCTGATGGGAGAGGATCTTGAATCTTTGAATCTCAAGGAGTTGCAGCAACTGGAGCAGCAGCTGGAAAGCTCACTGAAACATATCAGATCCAGGAAGAACCAACTTATGCACGAATCCATTTCTGAGCTTCAGAAGAAGGAGAGGTCACTGCAGGAGGAGAATAAAGTTCTCCAGAAGGAAATCCCTGTCCCTTCCCCACAGCTCGTCGAGAAGCAGAAGGCCCAGGCGGCGCAACAAGATCAGACTCAGCCTCAAACAAGCTCTTCTTCTTCTTCCTTCATGATGAGGGATGCTCCCCCTGCCGCAACTACCAGCATTCATCCAGCGGCATCAGGAGAGAGGGCAGAGGATGCGGCAGTGCAGCCGCAGGCCCCACCCCGGACGGGGCTTCCACTGTGGATGGTTAGCCACATCAACGGCTGAAGGGCTTCCAGCCCATATAAGCGTACTATTCAGTAGAGAGTAACAAGTTGCACCGGCCAGCCTGGTGTATGTTGCGGTTGCTAGCATGCCTGACCCCTTGGAGGGGAAAGGAAAAGAAATCAGAGTAAAGTAGCAAGCTGCAGTGATGTGTATATTTCACTTTGTCCACCTCAGTTTCCCTCCCAGCTGGGCTCAATTTACCATGTAATCTATATGTAGCTTGAGTGATGAATTTTCAAGTTTCCATGATACCCGTCTCGAGCGGGTGTTGTTTATGTGAATTAACCTATCAAATATGAGCATTGTGTATATTGTGATTCTTGAAAATAAATAAATCAGGACCTTTATGTCTTCG - >TraesCS5B02G396600.1
GTTTTGGCCTGGCCATCCTCCCTCTCCTCCCTCTCTTCCGCCTCACCCAACCACCTGACAGCCATGGCTCCGCCCCCCCGCCCCCGCCTGCGCCTGTCGGAGTAGCCGTCGCGGTCTGCCGGTGTTGGAGGCTTGGGGTGTAGGGTTGGCCCCGTTCTCCAGCGGAGATGGGGCGCGGGAAGGTGCAGCTGAAGCGGATCGAGAACAAGATCAACCGGCAGGTGACCTTCTCCAAGCGCCGCTCGGGGCTGCTCAAGAAGGCGCACGAGATCTCCGTGCTCTGCGACGCCGAGGTCGGCCTCATCATCTTCTCCACCAAGGGAAAGCTCTACGAGTTCTCCACCGAGTCATGTATGGACAAAATTCTTGAACGGTATGAGCGCTACTCTTATGCAGAAAAGGTTCTCGTTTCAAGTGAATCTGAAATTCAGGGAAACTGGTGTCACGAATATAGGAAACTGAAGGCGAAGGTTGAGACAATACAGAAATGTCAAAAGCATCTGATGGGAGAGGATCTTGAATCTTTGAATCTCAAGGAGTTGCAGCAACTGGAGCAGCAGCTGGAAAGCTCACTGAAACATATCAGATCCAGGAAGAACCAACTTATGCACGAATCCATTTCTGAGCTTCAGAAGAAGGAGAGGTCACTGCAGGAGGAGAATAAAGTTCTCCAGAAGGAAATCCCTGTCCCTTCCCCACAGCTCGTCGAGAAGCAGAAGGCCCAGGCGGCGCAACAAGATCAGACTCAGCCTCAAACAAGCTCTTCTTCTTCTTCCTTCATGATGAGGGATGCTCCCCCTGCCGCAACTACCAGCATTCATCCAGCGGCATCAGGAGAGAGGGCAGAGGATGCGGCAGTGCAGCCGCAGGCCCCACCCCGGACGGGGCTTCCACTGTGGATGGTTAGCCACATCAACGGCTGAAGGGCTTCCAGCCCATATAAGCGTACTATTCAGTAGAGAGTAACAAGTTGCACCGGCCAGCCTGGTGTATGTTGCGGTTGCTAGCATGCCTGACCCCTTGGAGGGGAAAGGAAAAGAAATCAGAGTAAAGTAGCAAGCTGCAGTGATGTGTATATTTCACTTTGTCCACCTCAGTTTCCCTCCCAGCTGGGCTCAATTTACCATGTAATCTATATGTAGCTTGAGTGATGAATTTTCAAGTTTCCATGATACCCGTCTCGAGCGGGTGTTGTTTATGTGAATTAACCTATCAAATATGAGCATTGTGTATATTGTGATTCTTGAAAATAAATAAATCAGGACCTTTATGTCTTCG
CDS Sequence
- >TraesCS5B02G396600.2
ATGGGGCGCGGGAAGGTGCAGCTGAAGCGGATCGAGAACAAGATCAACCGGCAGGTGACCTTCTCCAAGCGCCGCTCGGGGCTGCTCAAGAAGGCGCACGAGATCTCCGTGCTCTGCGACGCCGAGGTCGGCCTCATCATCTTCTCCACCAAGGGAAAGCTCTACGAGTTCTCCACCGAGTCATGTATGGACAAAATTCTTGAACGGTATGAGCGCTACTCTTATGCAGAAAAGGTTCTCGTTTCAAGTGAATCTGAAATTCAGGGAAACTGGTGTCACGAATATAGGAAACTGAAGGCGAAGGTTGAGACAATACAGAAATGTCAAAAGCATCTGATGGGAGAGGATCTTGAATCTTTGAATCTCAAGGAGTTGCAGCAACTGGAGCAGCAGCTGGAAAGCTCACTGAAACATATCAGATCCAGGAAGAACCAACTTATGCACGAATCCATTTCTGAGCTTCAGAAGAAGGAGAGGTCACTGCAGGAGGAGAATAAAGTTCTCCAGAAGGAAATCCCTGTCCCTTCCCCACAGCTCGTCGAGAAGCAGAAGGCCCAGGCGGCGCAACAAGATCAGACTCAGCCTCAAACAAGCTCTTCTTCTTCTTCCTTCATGATGAGGGATGCTCCCCCTGCCGCAACTACCAGCATTCATCCAGCGGCATCAGGAGAGAGGGCAGAGGATGCGGCAGTGCAGCCGCAGGCCCCACCCCGGACGGGGCTTCCACTGTGGATGGTTAGCCACATCAACGGCTGA - >TraesCS5B02G396600.1
ATGGGGCGCGGGAAGGTGCAGCTGAAGCGGATCGAGAACAAGATCAACCGGCAGGTGACCTTCTCCAAGCGCCGCTCGGGGCTGCTCAAGAAGGCGCACGAGATCTCCGTGCTCTGCGACGCCGAGGTCGGCCTCATCATCTTCTCCACCAAGGGAAAGCTCTACGAGTTCTCCACCGAGTCATGTATGGACAAAATTCTTGAACGGTATGAGCGCTACTCTTATGCAGAAAAGGTTCTCGTTTCAAGTGAATCTGAAATTCAGGGAAACTGGTGTCACGAATATAGGAAACTGAAGGCGAAGGTTGAGACAATACAGAAATGTCAAAAGCATCTGATGGGAGAGGATCTTGAATCTTTGAATCTCAAGGAGTTGCAGCAACTGGAGCAGCAGCTGGAAAGCTCACTGAAACATATCAGATCCAGGAAGAACCAACTTATGCACGAATCCATTTCTGAGCTTCAGAAGAAGGAGAGGTCACTGCAGGAGGAGAATAAAGTTCTCCAGAAGGAAATCCCTGTCCCTTCCCCACAGCTCGTCGAGAAGCAGAAGGCCCAGGCGGCGCAACAAGATCAGACTCAGCCTCAAACAAGCTCTTCTTCTTCTTCCTTCATGATGAGGGATGCTCCCCCTGCCGCAACTACCAGCATTCATCCAGCGGCATCAGGAGAGAGGGCAGAGGATGCGGCAGTGCAGCCGCAGGCCCCACCCCGGACGGGGCTTCCACTGTGGATGGTTAGCCACATCAACGGCTGA
Protein Sequence
- >TraesCS5B02G396600.2
MGRGKVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVGLIIFSTKGKLYEFSTESCMDKILERYERYSYAEKVLVSSESEIQGNWCHEYRKLKAKVETIQKCQKHLMGEDLESLNLKELQQLEQQLESSLKHIRSRKNQLMHESISELQKKERSLQEENKVLQKEIPVPSPQLVEKQKAQAAQQDQTQPQTSSSSSSFMMRDAPPAATTSIHPAASGERAEDAAVQPQAPPRTGLPLWMVSHING - >TraesCS5B02G396600.1
MGRGKVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVGLIIFSTKGKLYEFSTESCMDKILERYERYSYAEKVLVSSESEIQGNWCHEYRKLKAKVETIQKCQKHLMGEDLESLNLKELQQLEQQLESSLKHIRSRKNQLMHESISELQKKERSLQEENKVLQKEIPVPSPQLVEKQKAQAAQQDQTQPQTSSSSSSFMMRDAPPAATTSIHPAASGERAEDAAVQPQAPPRTGLPLWMVSHING