Gene Details:
- Gene ID: TraesCS5A02G542600
- Gene Symbol: TraesCS5A02G542600
- Gene Name: transmembrane transporter
- Genome: Chinese_Spring1.0
- Species: Triticum aestivum
Functional Descriptions:
- We identified putative candidate genes that are potentially involved in metal uptake, transport, and assimilation, including TraesCS5A02G542600 on chromosome 5A, which was annotated as a Major Facilitator Superfamily transporter and acted on all the minerals except K.
- TraesCS5A02G542600 was highly expressed in seed coat, and to a lesser extent in the peduncle, awns, and lemma.
- TraesCS5A02G542600 at 5A showed the highest expression in most of the organs and tissues, indicating that they play vital roles during growth, filling, and development.
- It was linked to the gene TraesCS5A02G542600, which encodes a transmembrane transporter belonging to the Major Facilitator Superfamily (MSF).
Function-related keywords:
- growth , development , seed , transporter , metal-transport , lemma , seed-development , seed-growth , as-transport , seed-filling , peduncle
Literature:
- Toward identification of a putative candidate gene for nutrient mineral accumulation in wheat grains for human nutrition purposes. DOI: 10.1093/jxb/erab297 ; PMID: 34145452
Related News:
Gene Resources:
- NCBI ID:
- UniProt accessions: A0A3B6KUM3
Orthologs:
Sequences:
cDNA Sequence
- >TraesCS5A02G542600.1
CCCATCCCATCCCAAGGGGCTCTCACTGGCTCAGTCCCCACTGCTGCTGGCTGAGCTCTCCCCTTCCCCCCAAATTCATCTCCAACTCCAGCCAAGAATTAATCAATCAATGGCGATAGGGGGGGCGTTCGTGGAGGGCCCGGCGGGCGGCGCCGGGTACAGCGGCCGGGTCACCTCCTTCGTCGTCCTCTCCTGCATCGTCGCCGGCAGCGGCGGCATCCTCTTCGGCTACGACCTCGGAATCTCAGGCGGCGTCACGTCCATGGAGTCGTTCCTCAAGAAATTCTTCCCGGACGTGTACCACCAGATGAACGGCGACAAGGCCGCCGTCTCCAACTACTGCCGCTTCGACAGCGAGCTGCTCACCGTCTTCACCTCCTCCCTCTACGTCGCCGGCCTCGTCGCCACCCTCTTTGCCTCCACCGTCACCACCCGCTACGGCCGCCGCGCCTCCATCCTCATCGGCGGCTCCGTCTTCATCGCCGGATCCGCATTCGGGGGCGCCGCCGTCAACGTCTACATGCTCCTCGTCAACCGCATCCTCCTCGGCATCGGCCTCGGATTCACCAACCAGTCGATTCCACTGTACCTCTCGGAAATGGCGCCGCCGCAGTACCGTGGCGCCATCAACAACGGCTTTGAGCTCTGTATCAGCATCGGCATCCTCATTGCGAACGTTATCAACTATGGAGTGCAGAAAATCGAAGGAGGATGGGGGTGGAGGATATCACTGTCCATGGCTGCTGTCCCCGCTGCATTTCTGACTATCGGTGCGATCTTCCTTCCTGAGACCCCGAGCTTCCTGATCCAGCGTGATGGCAATGTCGACGAGGCGAAGATGATGCTCCAGAGGCTGCGTGGCACGATGGGGGTTCAGAAAGAGCTCGACGATCTGGTCACCGCTAGCAACATATCCAGAGCAATCAAGAACCCGTACCGGAACATCCTGAAGAAGAAGTACAGGCCGCAGCTCGTGATAGCGCTCCTCATTCCTTTCTTCAACCAGGTCACGGGAATCAACGTGATCAACTTCTATGCGCCGGTCATGTTCCGGACCATTGGGCTAGGGGAGAGTGCAGCACTCATGTCAGCGGTCGTGACACGCCTCTGCGCCACAGTCGCCAACATCGTGGCCATGATCGTCGTCGACAAGTTCGGGCGAAGAAAGCTCTTGCTGGGTTCGCCTGGTCCTGGGGACCTCTCACCTACCTGGTGCCAACAGAGATCTGCCCGCTGGAGATCAGGTCGGCAGGGCAGAGCGTTGTGATTGCGGTCATCTTCCTGATGACCTTTGTGATCGGGCAGACGTTTCTCAACATGCTGTGCCATCTCAAGTTCGGCACCTTCTTCCTGTTTGGCGGGTGGGTGTGCGTGATGACGCTGTTCGTCTTCTTCTTCCTGCCGGAGACGAAGCAGCTGCCCATGGAGCAGATGGAGCAGGTGTGGAGGAAGCACTGGTTCTGGAAGAGGATAATTGGGGAGGGGGAAGAAGAGGTGGATCAGGCACAAACTGGTGCAGGAGC - >TraesCS5A02G542600.2
CCCATCCCATCCCAAGGGGCTCTCACTGGCTCAGTCCCCACTGCTGCTGGCTGAGCTCTCCCCTTCCCCCCAAATTCATCTCCAACTCCAGCCAAGAATTAATCAATCAATGGCGATAGGGGGGGCGTTCGTGGAGGGCCCGGCGGGCGGCGCCGGGTACAGCGGCCGGGTCACCTCCTTCGTCGTCCTCTCCTGCATCGTCGCCGGCAGCGGCGGCATCCTCTTCGGCTACGACCTCGGAATCTCAGGCGGCGTCACGTCCATGGAGTCGTTCCTCAAGAAATTCTTCCCGGACGTGTACCACCAGATGAACGGCGACAAGGCCGCCGTCTCCAACTACTGCCGCTTCGACAGCGAGCTGCTCACCGTCTTCACCTCCTCCCTCTACGTCGCCGGCCTCGTCGCCACCCTCTTTGCCTCCACCGTCACCACCCGCTACGGCCGCCGCGCCTCCATCCTCATCGGCGGCTCCGTCTTCATCGCCGGATCCGCATTCGGGGGCGCCGCCGTCAACGTCTACATGCTCCTCGTCAACCGCATCCTCCTCGGCATCGGCCTCGGATTCACCAACCAGTCGATTCCACTGTACCTCTCGGAAATGGCGCCGCCGCAGTACCGTGGCGCCATCAACAACGGCTTTGAGCTCTGTATCAGCATCGGCATCCTCATTGCGAACGTTATCAACTATGGAGTGCAGAAAATCGAAGGAGGATGGGGGTGGAGGATATCACTGTCCATGGCTGCTGTCCCCGCTGCATTTCTGACTATCGGTGCGATCTTCCTTCCTGAGACCCCGAGCTTCCTGATCCAGCGTGATGGCAATGTCGACGAGGCGAAGATGATGCTCCAGAGGCTGCGTGGCACGATGGGGGTTCAGAAAGAGCTCGACGATCTGGTCACCGCTAGCAACATATCCAGAGCAATCAAGAACCCGTACCGGAACATCCTGAAGAAGAAGTACAGGCCGCAGCTCGTGATAGCGCTCCTCATTCCTTTCTTCAACCAGGTCACGGGAATCAACGTGATCAACTTCTATGCGCCGGTCATGTTCCGGACCATTGGGCTAGGGGAGAGTGCAGCACTCATGTCAGCGGTCGTGACACGCCTCTGCGCCACAGTCGCCAACATCGTGGCCATGATCGTCGTCGACAAGTTCGGGCGAAGAAAGCTCTTGCTGGGTTCGCCTGGTCCTGGGGACCTCTCACCTACCTGGTGCCAACAGAGATCTGCCCGCTGGAGATCAGGTCGGCAGGGCAGAGCGTTGTGATTGCGGTCATCTTCCTGATGACCTTTGTGATCGGGCAGACGTTTCTCAACATGCTGTGCCATCTCAAGTTCGGCACCTTCTTCCTGTTTGGCGGGTGGGTGTGCGTGATGACGCTGTTCGTCTTCTTCTTCCTGCCGGAGACGAAGCAGCTGCCCATGGAGCAGATGGAGCAGGTGTGGAGGAAGCACTGGTTCTGGAAGAGGATAATTGGGGAGGGGGAAGAAGAGGTGGATCAGGCACAAACTGGTGCAGGAGC
CDS Sequence
- >TraesCS5A02G542600.1
ATGGCGATAGGGGGGGCGTTCGTGGAGGGCCCGGCGGGCGGCGCCGGGTACAGCGGCCGGGTCACCTCCTTCGTCGTCCTCTCCTGCATCGTCGCCGGCAGCGGCGGCATCCTCTTCGGCTACGACCTCGGAATCTCAGGCGGCGTCACGTCCATGGAGTCGTTCCTCAAGAAATTCTTCCCGGACGTGTACCACCAGATGAACGGCGACAAGGCCGCCGTCTCCAACTACTGCCGCTTCGACAGCGAGCTGCTCACCGTCTTCACCTCCTCCCTCTACGTCGCCGGCCTCGTCGCCACCCTCTTTGCCTCCACCGTCACCACCCGCTACGGCCGCCGCGCCTCCATCCTCATCGGCGGCTCCGTCTTCATCGCCGGATCCGCATTCGGGGGCGCCGCCGTCAACGTCTACATGCTCCTCGTCAACCGCATCCTCCTCGGCATCGGCCTCGGATTCACCAACCAGTCGATTCCACTGTACCTCTCGGAAATGGCGCCGCCGCAGTACCGTGGCGCCATCAACAACGGCTTTGAGCTCTGTATCAGCATCGGCATCCTCATTGCGAACGTTATCAACTATGGAGTGCAGAAAATCGAAGGAGGATGGGGGTGGAGGATATCACTGTCCATGGCTGCTGTCCCCGCTGCATTTCTGACTATCGGTGCGATCTTCCTTCCTGAGACCCCGAGCTTCCTGATCCAGCGTGATGGCAATGTCGACGAGGCGAAGATGATGCTCCAGAGGCTGCGTGGCACGATGGGGGTTCAGAAAGAGCTCGACGATCTGGTCACCGCTAGCAACATATCCAGAGCAATCAAGAACCCGTACCGGAACATCCTGAAGAAGAAGTACAGGCCGCAGCTCGTGATAGCGCTCCTCATTCCTTTCTTCAACCAGGTCACGGGAATCAACGTGATCAACTTCTATGCGCCGGTCATGTTCCGGACCATTGGGCTAGGGGAGAGTGCAGCACTCATGTCAGCGGTCGTGACACGCCTCTGCGCCACAGTCGCCAACATCGTGGCCATGATCGTCGTCGACAAGTTCGGGCGAAGAAAGCTCTTGCTGGGTTCGCCTGGTCCTGGGGACCTCTCACCTACCTGGTGCCAACAGAGATCTGCCCGCTGGAGATCAGGTCGGCAGGGCAGAGCGTTGTGA - >TraesCS5A02G542600.2
ATGGCGATAGGGGGGGCGTTCGTGGAGGGCCCGGCGGGCGGCGCCGGGTACAGCGGCCGGGTCACCTCCTTCGTCGTCCTCTCCTGCATCGTCGCCGGCAGCGGCGGCATCCTCTTCGGCTACGACCTCGGAATCTCAGGCGGCGTCACGTCCATGGAGTCGTTCCTCAAGAAATTCTTCCCGGACGTGTACCACCAGATGAACGGCGACAAGGCCGCCGTCTCCAACTACTGCCGCTTCGACAGCGAGCTGCTCACCGTCTTCACCTCCTCCCTCTACGTCGCCGGCCTCGTCGCCACCCTCTTTGCCTCCACCGTCACCACCCGCTACGGCCGCCGCGCCTCCATCCTCATCGGCGGCTCCGTCTTCATCGCCGGATCCGCATTCGGGGGCGCCGCCGTCAACGTCTACATGCTCCTCGTCAACCGCATCCTCCTCGGCATCGGCCTCGGATTCACCAACCAGTCGATTCCACTGTACCTCTCGGAAATGGCGCCGCCGCAGTACCGTGGCGCCATCAACAACGGCTTTGAGCTCTGTATCAGCATCGGCATCCTCATTGCGAACGTTATCAACTATGGAGTGCAGAAAATCGAAGGAGGATGGGGGTGGAGGATATCACTGTCCATGGCTGCTGTCCCCGCTGCATTTCTGACTATCGGTGCGATCTTCCTTCCTGAGACCCCGAGCTTCCTGATCCAGCGTGATGGCAATGTCGACGAGGCGAAGATGATGCTCCAGAGGCTGCGTGGCACGATGGGGGTTCAGAAAGAGCTCGACGATCTGGTCACCGCTAGCAACATATCCAGAGCAATCAAGAACCCGTACCGGAACATCCTGAAGAAGAAGTACAGGCCGCAGCTCGTGATAGCGCTCCTCATTCCTTTCTTCAACCAGGTCACGGGAATCAACGTGATCAACTTCTATGCGCCGGTCATGTTCCGGACCATTGGGCTAGGGGAGAGTGCAGCACTCATGTCAGCGGTCGTGACACGCCTCTGCGCCACAGTCGCCAACATCGTGGCCATGATCGTCGTCGACAAGTTCGGGCGAAGAAAGCTCTTGCTGGGTTCGCCTGGTCCTGGGGACCTCTCACCTACCTGGTGCCAACAGAGATCTGCCCGCTGGAGATCAGGTCGGCAGGGCAGAGCGTTGTGA
Protein Sequence
- >TraesCS5A02G542600.1
MAIGGAFVEGPAGGAGYSGRVTSFVVLSCIVAGSGGILFGYDLGISGGVTSMESFLKKFFPDVYHQMNGDKAAVSNYCRFDSELLTVFTSSLYVAGLVATLFASTVTTRYGRRASILIGGSVFIAGSAFGGAAVNVYMLLVNRILLGIGLGFTNQSIPLYLSEMAPPQYRGAINNGFELCISIGILIANVINYGVQKIEGGWGWRISLSMAAVPAAFLTIGAIFLPETPSFLIQRDGNVDEAKMMLQRLRGTMGVQKELDDLVTASNISRAIKNPYRNILKKKYRPQLVIALLIPFFNQVTGINVINFYAPVMFRTIGLGESAALMSAVVTRLCATVANIVAMIVVDKFGRRKLLLGSPGPGDLSPTWCQQRSARWRSGRQGRAL - >TraesCS5A02G542600.2
MAIGGAFVEGPAGGAGYSGRVTSFVVLSCIVAGSGGILFGYDLGISGGVTSMESFLKKFFPDVYHQMNGDKAAVSNYCRFDSELLTVFTSSLYVAGLVATLFASTVTTRYGRRASILIGGSVFIAGSAFGGAAVNVYMLLVNRILLGIGLGFTNQSIPLYLSEMAPPQYRGAINNGFELCISIGILIANVINYGVQKIEGGWGWRISLSMAAVPAAFLTIGAIFLPETPSFLIQRDGNVDEAKMMLQRLRGTMGVQKELDDLVTASNISRAIKNPYRNILKKKYRPQLVIALLIPFFNQVTGINVINFYAPVMFRTIGLGESAALMSAVVTRLCATVANIVAMIVVDKFGRRKLLLGSPGPGDLSPTWCQQRSARWRSGRQGRAL