Information report for TabHLH489
Gene Details
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Functional Descriptions
- Identified a wheat atypical basic helix–loop–helix (bHLH) transcription factor, TabHLH489, which is tightly associated with grain length through genome-wide association study and map-based cloning.
- Knockout of TabHLH489 and its homologous genes resulted in increased grain length and weight, whereas the overexpression led to decreased grain length and weight.
- Importantly, natural variations in the promoter region of TabHLH489 affect the TaBZR1 binding ability, thereby influencing TabHLH489 expression.
- The TaSnRK1α1-TabHLH489 regulatory module integrates BR and sugar signalling to regulate grain length, presenting potential targets for enhancing grain size in wheat.
Functional Keywords
- transcription-factor , grain , grain-length , grain-size , br , map-based-cloning , grain-weight , sugar
Literature and News
Gene Resources
- NCBI ID: KAF7018870
- UniProt accessions: A0A3B6DLT0
- EnsemblPlants: TraesCS2D02G499200.1
- Gramene: TraesCS2D02G499200.1
- GO: GO:0005634 , GO:0006355
- OMA: CNIYREN
- InterPro: IPR044549 , IPR044660
- PANTHER: PTHR33124 , PTHR33124:SF40
- OrthoDB: A0A3B6DLT0
- SMR: A0A3B6DLT0
- CDD: cd11444
Sequences
cDNA Sequence
- >TraesCS2D02G499200.1
GTGTCAGAGCCGTGTTTCTCGGGCTCTCTCTCCACCATCACAACAGCACAAAGGCAGCAGCAGCATCGCGGCCCCATTGCTCTCGCCGCTTTGTGTCAGACACCAAATCTTCCTCACCTTCTTCTTCCTCTCCCTCCCCCACCCAATCTCCTCCCCCACGAGCGCCTCTACTGCCTTTTAAGCCACGCGCCCGCGCCCCCCGCGTACGCCTCCCGCCTTTCCTCTCTCTCCCTCTCTCCTCGCCCTCTCCTCCTCCTCCTCCTCTTCTCTCTGTGAGTTGAGGTGAGGTGAGGATTTTCCGTGGACGTGCCGTTTGATGGACGGGAAGGGCGCGACGGAGAGCTCAAACCCTAACCGCGTCGTTGAGAGCGTACCATCGGCGGCCGTGGCGTCGGCGTCGGCGCCGACGAAGCGCATGCTGGCGTTCCACTTCCTGCGCGCGCTGTCCCGGATCCACGGCGCGGCCGGCCCGGCCAGGCGCCGCACGCGCACCATCCGCCGCGCGGCCTACTCATCCATGGCGCGCGCCACCGGGCCGCGCCGCGCATGGAGCCGCGCGCTGCTGCTCCAGGCCCAGGCGCGCGCGCGGAGATCCAGGGCGGAGACGTCGAGGCGGGCCGCGGTGCTCGTACGGCGGCGCGTCGTCGCCGGACCGGCAGCAGCACCAGCACCAGCACGCGCCGCTCCTGTCGGCGGACAAGCATCGGCGGCGGCTGCTCGTGCGGCTCTGGCCCCTCCGCCCCCTCCGGCAAGGCAGGCGGGGGAGCCGGCGAGGAGCGACGCGCTGCGGCGGCTCGTCCCCGGAGGCGCCGGGATGGAGTACTGCAGCCTGCTGGAGGAGACCGCCGACTACGTCCGCTGCCTCCGCGCGCAGGTGCAGCTCATGCAGGGCCTCGCCGACCTCTTCTCCTGCCAATGATCCATCCAGTCCATCATCATCATCATGCATCCTCGGATCGATCGAGTAATTCTAAATTATTACTTCTTCCTGCACGTACCATCCATGGATTGAAATCATACGATGCTGCTGCGGTGCGGCCGGCTTCCATGATATCGATCCATGGATCTCTTGTTCATGTGACATGAGATTGGTCAATGCATCGATCGCGCATGATCAATATAGAGGATTACCGGCCGGCAGGGGAGAGTTAGGTACGGTGGAGGTGGAGGAAGATTGGTGGAGTATATATGTTGAGCTGCTGGCAGGGTGAATTATTAGTAGGTGAGAAAAGATTGGGTGTAGTATGCATTTGTATAGGTTGGGGACACATTGGAACCACACCAGGGAAAATACAAAGGTAATTAATTGTAACATATAAAGAGATAATCGATCGATAAGGAGTTACATATGTGCAGTGTTATTGGGTTAATTAGCAAATTGATCTATGCATAATATGTTCTTGATTGATGTGTAGGTTATGAGGCATATCTGTACACTCCTCTTTCTGTTACCTTTTCTCTTGTAGGTCTATCTGTGAATTCTGATTGGTGAGCAAGGTAATTAATTAGGGGAACTTTACCATGCATGCCTACACATGCAGTTCCATGCATGAAAGCATAGCAATGTTCCCTTTCATCCTGATGCATGTGACAGATTGTATATTGCTGTTGAGCTAGCTAGCTAGCTAGACACATATGTTGATTGCTCTAGAATCAAAGAGTAGTTCCCTGCACATGCATCCATGTATAGCTGGATGATGCTCTGGCTAGATATATAGCTAGCTGCCTTTTGCCTTGTGATTAGATTAGAGTGCTTGAGGGGTGGTTATGCTGAGGTTGTTTGGTGGAGTGTTTATTTTCCAAGCTCCTCCCAAACTTGAGAAAGTGGGATCCACAATCTATGGAAGATAGGGGTTTGATAATCCTTGAGCTGGAGAAGACATAACTTGTAGCCAAAGGGACCTAAGACATTCTCTCCATCGGCGGTTAGCATCTTTTGATTAAAGTGCATCCCTTTGGTTTTCCCCTTTGAAATCATCTTCTCTCTCTCTCTCTCTCTCTCTCAACTACCAACTTATACCTGTTCCTTTTTAGGTGCCACCGGAGTATTCCGTGTGTGTACTTGATGCTGGTCTTCTCTGTTTGCTTCTCTTTTTGCCGTGTTCTTAGTTGTCTTCAGACACATGCATGCGTTCCATGCGTGCTTTCTTTATGGGGGTTACGAATCTCAAAGGCTTGATATTGCTTCTTTTTCATGTTTCAGTTCAGACAAGAAAAGTAATTAACCTGCATGTCATCTCATCGATATTTATACACGGAACATTAGCTTAACTCATGGTAAAAAATATGAGTAAAAAGGAGTCACTATATGGACATGAAAATATATATGCATGTGTGAGAGTATGCACTATTCCACATATCTCAACTGCATGTAATTTTCTCTATGCGTGCCACTTCTTTGATTTTATACCTATTAGTATATATGTTGAGCTTATTTTGGGCAAAAGTGTTTTATAGTTTCCACTTACATATGATTATTTCCACTTACCTATAATGATACACTGTTTTTTCTGATAGTATGTTAGTATTATATTTTACATTGTTTTCAAAATTGACATTGCCCTGTTGCTGTCAATTAAATATTCATGTGACAAAGGCTTGGCCTGAATCCCCACTTTTTGACACGACTAGCTGCATGCGTGTGTGCATCTCGCCTGAGAAGTCATTGTCCAATATCTTGCATTGGACCACAGATTAGCCATATAAGATGGCTATAAATCATTCACATCACTAAAAATGGTACTCAAATGAACAGCTAATGACATCTTGAAGTCTACCAGCTCATAATTGGCCCACTTGAAGATTAGCTGTACTCTTTTGCTATCATCAACTTTCCCTTCAATTAATATGAATACAAGACGAAAGTTTAAACAAAATAATGTTGGCTGATCAACATGGTGCACTGATTATTTGTGGATATATTTTGTATGAACACTAGTATATATATGTCTAGGCAATTAAATCACATCCAAGATTTGTACTAGCTATATATTTCCCTGGTCTATCCAATTTTCTTCTAGCCAGCCTCCAAAACAACCTAGGGGCGTAGCCAACTTCAGTATATATTGTTAACAAAACAGTCTCCAGTAAGTAATGCTGCTGATTCTATGAGATTTCTCCGTACACGTGCCAAATTTTGTTTTTTCATCATGCGTATATAATGGACATAATACAGCTGGAATATCATGAGTTAGGTCACTATTATTTGTGTCGAGCAAGAGCGAAAGATTGCCATAGAATTGATACTTTCATTGTCACATTTTAGAGGAATTTTGGATCCCGATACCTAGAGATTCTTATTCCATAAACATTGAGAACTGTGAATTTAAAATAATCTGAAATGATTTTTATGTGTGCGGGAATTACTTGTGCTACTGCAAAATTTTGTCAAAAAATGTTTCCATTTGTGTCTTGGAAAAAGATGTTTTGCTATTGCACAGATTGTAAAACTCCGCATTGTCCTACTAAAACTAGTTTTTTTTACCCAATATTGCAGTTATACGCAGTTTTTCATAAGCTTTTGCAGTTCAAAAAATTATTTTGCATCACATTTATTTGTAGAGCCCAAGCTCTAAAATCAATTACTAGTTTGTAGCACCCTTATTTTTGTGGGCGTACAATGTCACATTTTTGGGTTTGTTGTATTAAATCAAGCAAGAATGTAAGCCCACAAGAGGTGAAATATACATGTTTGTCTGTCTTAGAGTTACACACAGACAATGTAGTTCCCGCTAGGATGAACAATGCTCTCTTAGAGCACCAACCATTGCAAATATATAAGTACACCTGCACACATAGTACCAACCATTATATAACCAAATAATGCACATTTAGTTTCAGACTTTCATGTTATCCTCCTCTAAAAGTGGCCTCTTTTATTCAAATGAGTTGCAAAGGAATTGTGGAGGATTCTAATCCTTAGGATTTTTTCAATGTTGGTTTTTTGATTGGTTGGATTGCACAACCACAGGATTATTTCCTCCGGATTCATTCGCGCTGGATTCATAGAAAAATTCCCATCCACTCCACCTCATGTGAATAATCCTATATTTTTATGGGCACAATCAGTT
CDS Sequence
- >TraesCS2D02G499200.1
ATGGACGGGAAGGGCGCGACGGAGAGCTCAAACCCTAACCGCGTCGTTGAGAGCGTACCATCGGCGGCCGTGGCGTCGGCGTCGGCGCCGACGAAGCGCATGCTGGCGTTCCACTTCCTGCGCGCGCTGTCCCGGATCCACGGCGCGGCCGGCCCGGCCAGGCGCCGCACGCGCACCATCCGCCGCGCGGCCTACTCATCCATGGCGCGCGCCACCGGGCCGCGCCGCGCATGGAGCCGCGCGCTGCTGCTCCAGGCCCAGGCGCGCGCGCGGAGATCCAGGGCGGAGACGTCGAGGCGGGCCGCGGTGCTCGTACGGCGGCGCGTCGTCGCCGGACCGGCAGCAGCACCAGCACCAGCACGCGCCGCTCCTGTCGGCGGACAAGCATCGGCGGCGGCTGCTCGTGCGGCTCTGGCCCCTCCGCCCCCTCCGGCAAGGCAGGCGGGGGAGCCGGCGAGGAGCGACGCGCTGCGGCGGCTCGTCCCCGGAGGCGCCGGGATGGAGTACTGCAGCCTGCTGGAGGAGACCGCCGACTACGTCCGCTGCCTCCGCGCGCAGGTGCAGCTCATGCAGGGCCTCGCCGACCTCTTCTCCTGCCAATGA
Protein Sequence
- >TraesCS2D02G499200.1.cds1
MDGKGATESSNPNRVVESVPSAAVASASAPTKRMLAFHFLRALSRIHGAAGPARRRTRTIRRAAYSSMARATGPRRAWSRALLLQAQARARRSRAETSRRAAVLVRRRVVAGPAAAPAPARAAPVGGQASAAAARAALAPPPPPARQAGEPARSDALRRLVPGGAGMEYCSLLEETADYVRCLRAQVQLMQGLADLFSCQ