Information report for TaZIM-D1
Gene Details
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Functional Descriptions
- TaZIM-A1 and TaZIM-B1 haplotypes as associated with heading date and thousand-kernel weight (TKW). Together, our findings provide new insights into the regulatory roles of the circadian clock and photoperiod pathways in determining wheat heading date.
- Association of TaZIM-1 haplotypes with heading date and TKW in common wheat.
- TaZIM-A1 and TaZIM-B1 haplotypes might have experienced positive selection, globally, contingent upon local environmental conditions.
Functional Keywords
Literature and News
Gene Resources
- NCBI ID: 123164935
- UniProt accessions: A0A3B6TJC9
- EnsemblPlants: TraesCS7D02G416000.1
- Gramene: TraesCS7D02G416000.1
- GO: GO:0005634 , GO:0006355 , GO:0008270 , GO:0043565
- InterPro: IPR000679 , IPR010399 , IPR010402 , IPR013088 , IPR045280
- PANTHER: PTHR46125 , PTHR46125:SF27
- SUPFAM: SSF57716
- PROSITE: PS00344 , PS50114 , PS51017 , PS51320
- Gene3D: 3.30.50.10
- OrthoDB: A0A3B6TJC9
- SMR: A0A3B6TJC9
- CDD: cd00202
Homologs
- Brachypodium distachyon: Bradi1g33980.1.p, Bradi1g33980.2.p
- Panicum virgatum: Pavir.4KG377700.1.p
- Setaria italica: Seita.4G243700.1.p, Seita.4G243700.2.p
- Setaria viridis: Sevir.4G256600.1.p, Sevir.4G256600.2.p
Sequences
cDNA Sequence
- >TraesCS7D02G416000.1
AGCCCGTGTCCATTTCCACCCTCCAAACCAAAATCGGATCGCGATCCTAGGGTTACCACACCCTCCTCCCCACCCCCATCCCCGTCGTCCGATCCGGTCCGATCCGGTCCTTCGCCATGGCACAGCACGACGGCAAGCCATACCAGCCGCGCCGGGGCCCCGAGCGGCCCCCGCAGCCGGCGGAGGACCCGCCCGCGCCCGCCGCTGCGCCCGCAGCAGCGGACGCCGTGATTGACCACCTCGCGGCCGTGGCTGCCGAGGCGGAGGCGTTGAACGCGTCCATCGCGGCCGTCGCGGCCGAGGCGGAGGCGATGAACGCGTACGAGCACGCGCAGGAGCAGGAGATGGAGGAGGAAGAAGAGGAGGAGGAAGAGGAGGAAGAGGAGGAGATGGAGGAGGAGGAGGACGAGGGCGAGGGGGATGGGCAACACGAGCATGGGCAGCACGGCGGCAACGGGGAGTCCGTCCCGATGGACGCCGAGGCCGTGGCACAGGCTGCTGCTGCAGCTGCGGCCGGCGCACCGTTGGACCCGCACGGGGCGATGGTCTCTGCGATTGTGCCGCCCGCCACGGGTAACCAGCTCACCCTTTCATTTCAGGGCGAGGTCTACGTGTTCGACTCTGTTTCCCCTGATAAGGTGCAAGCTGTGCTTTTGCTGCTAGGGGGAAGGGAGCTGAACCCAGGCATGGGTGCCGGAGCATCATCATCTACTCCATACAGTAAGAGGTTGAATTTTCCACACCGGGTGGCATCGTTGATGAGGTTTAGGGAGAAGCGGAAAGAGCGGAACTTTGATAAGAAGATCCGGTATACAGTTCGCAAGGAAGTTGCACTAAGGATGCAGCGTAATAGAGGCCAATTTACATCTTCAAAACCAAAACCTGATGACGGAACTTCTGAACTGGCAACTGCAGATGGCTCCCCAAACTGGGGATCAGTGGAAGGTCGACCTCCGTCTGCTGCTTCATGCCATCACTGTGGTACTAATGCACATAATACACCTATGATGCGTCGTGGACCTGAAGGGCCAAGAACATTATGCAATGCTTGCGGCCTCATGTGGGCAAATAAGGGCATGTTGAGGGACCTATCAAAGTCTACTCCCCCATCTCTTCAAATGGTGTCAACAGGTCCAAATGATAGTAATGGAAACACCCTCTCTCAGCAGAATGGAAGCACCCTCTCTCAGCAGAATGGAAATGCTGCCATAGTGCCCTTTGCCGAGCAACAAAACCCAGCACCAGCGACCGATGCCAACGGTCACGGCCATGGGTCTTCAACATGATGAGCGGGATTGCTGCTTGTTTTTAACGGTGGATGGATGAAGGAGCGTCATCCTCCTCTTTGAGTGAACTTCCTGTGTAGGCGAAAACTGCTTGTATTATAACCTGAGTTAGGTTGTCCATCTTAGTGTCGTCTAGGGTTTAAAGAGCTGTTGTTTTTATCTGATGGAATCGTGCTTACCGCTGTTGTTGTGGCTATATAACAATTCTGATTCTTCTTGGTTGAGTCCAGTGTGAATGCCCTGTGGCCTGTTGTTATCTACAGATGATATCAAAGTAGTCGTTTTAACCCATGCTGAAGCAACCTAGTGTTT - >TraesCS7D02G416000.2
AGCCCGTGTCCATTTCCACCCTCCAAACCAAAATCGGATCGCGATCCTAGGGTTACCACACCCTCCTCCCCACCCCCATCCCCGTCGTCCGATCCGGTCCGATCCGGTCCTTCGCCATGGCACAGCACGACGGCAAGCCATACCAGCCGCGCCGGGGCCCCGAGCGGCCCCCGCAGCCGGCGGAGGACCCGCCCGCGCCCGCCGCTGCGCCCGCAGCAGCGGACGCCGTGATTGACCACCTCGCGGCCGTGGCTGCCGAGGCGGAGGCGTTGAACGCGTCCATCGCGGCCGTCGCGGCCGAGGCGGAGGCGATGAACGCGTACGAGCACGCGCAGGAGCAGGAGATGGAGGAGGAAGAAGAGGAGGAGGAAGAGGAGGAAGAGGAGGAGATGGAGGAGGAGGAGGACGAGGGCGAGGGGGATGGGCAACACGAGCATGGGCAGCACGGCGGCAACGGGGAGTCCGTCCCGATGGACGCCGAGGCCGTGGCACAGGCTGCTGCTGCAGCTGCGGCCGGCGCACCGTTGGACCCGCACGGGGCGATGGTCTCTGCGATTGTGCCGCCCGCCACGGGTAACCAGCTCACCCTTTCATTTCAGGGCGAGGTCTACGTGTTCGACTCTGTTTCCCCTGATAAGGTGCAAGCTGTGCTTTTGCTGCTAGGGGGAAGGGAGCTGAACCCAGGCATGGGTGCCGGAGCATCATCATCTACTCCATACAGTAAGAGGTTGAATTTTCCACACCGGGTGGCATCGTTGATGAGGTTTAGGGAGAAGCGGAAAGAGCGGAACTTTGATAAGAAGATCCGGTATACAGTTCGCAAGGAAGTTGCACTAAGGATGCAGCGTAATAGAGGCCAATTTACATCTTCAAAACCAAAACCTGATGACGGAACTTCTGAACTGGCAACTGCAGATGGCTCCCCAAACTGGGGATCAGTGGAAGGTCGACCTCCGTCTGCTGCTTCATGCCATCACTGTGGTACTAATGCACATAATACACCTATGATGCGTCGTGGACCTGAAGGGCCAAGAACATTATGCAATGCTTGCGGCCTCATGTGGGCAAATAAGGGCATGTTGAGGGACCTATCAAAGTCTACTCCCCCATCTCTTCAAATGGTGTCAACAGGTCCAAATGATAGTAATGGAAACACCCTCTCTCAGCAGAATGGAAGCACCCTCTCTCAGCAGAATGGAAATGCTGCCATAGTGCCCTTTGCCGAGCAACAAAACCCAGCACCAGCGACCGATGCCAACGGTCACGGCCATGGGTCTTCAACATGATGAGCGGGATTGCTGCTTGTTTTTAACGGTGGATGGATGAAGGAGCGTCATCCTCCTCTTTGAGTGAACTTCCTGTGTAGGCGAAAACTGCTTGTATTATAACCTGAGTTAGGTTGTCCATCTTAGTGTCGTCTAGGGTTTAAAGAGCTGTTGTTTTTATCTGATGGAATCGTGCTTACCGCTGTTGTTGTGGCTATATAACAATTCTGATTCTTCTTGGTTGAGTCCAGTGTGAATGCCCTGTGGCCTGTTGTTATCTACAGATGATATCAAAGTAGTCGTTTTAACCCATGCTGAAGCAACCTAGTGTTT
CDS Sequence
- >TraesCS7D02G416000.1
ATGGCACAGCACGACGGCAAGCCATACCAGCCGCGCCGGGGCCCCGAGCGGCCCCCGCAGCCGGCGGAGGACCCGCCCGCGCCCGCCGCTGCGCCCGCAGCAGCGGACGCCGTGATTGACCACCTCGCGGCCGTGGCTGCCGAGGCGGAGGCGTTGAACGCGTCCATCGCGGCCGTCGCGGCCGAGGCGGAGGCGATGAACGCGTACGAGCACGCGCAGGAGCAGGAGATGGAGGAGGAAGAAGAGGAGGAGGAAGAGGAGGAAGAGGAGGAGATGGAGGAGGAGGAGGACGAGGGCGAGGGGGATGGGCAACACGAGCATGGGCAGCACGGCGGCAACGGGGAGTCCGTCCCGATGGACGCCGAGGCCGTGGCACAGGCTGCTGCTGCAGCTGCGGCCGGCGCACCGTTGGACCCGCACGGGGCGATGGTCTCTGCGATTGTGCCGCCCGCCACGGGTAACCAGCTCACCCTTTCATTTCAGGGCGAGGTCTACGTGTTCGACTCTGTTTCCCCTGATAAGGTGCAAGCTGTGCTTTTGCTGCTAGGGGGAAGGGAGCTGAACCCAGGCATGGGTGCCGGAGCATCATCATCTACTCCATACAGTAAGAGGTTGAATTTTCCACACCGGGTGGCATCGTTGATGAGGTTTAGGGAGAAGCGGAAAGAGCGGAACTTTGATAAGAAGATCCGGTATACAGTTCGCAAGGAAGTTGCACTAAGGATGCAGCGTAATAGAGGCCAATTTACATCTTCAAAACCAAAACCTGATGACGGAACTTCTGAACTGGCAACTGCAGATGGCTCCCCAAACTGGGGATCAGTGGAAGGTCGACCTCCGTCTGCTGCTTCATGCCATCACTGTGGTACTAATGCACATAATACACCTATGATGCGTCGTGGACCTGAAGGGCCAAGAACATTATGCAATGCTTGCGGCCTCATGTGGGCAAATAAGGGCATGTTGAGGGACCTATCAAAGTCTACTCCCCCATCTCTTCAAATGGTGTCAACAGGTCCAAATGATAGTAATGGAAACACCCTCTCTCAGCAGAATGGAAGCACCCTCTCTCAGCAGAATGGAAATGCTGCCATAGTGCCCTTTGCCGAGCAACAAAACCCAGCACCAGCGACCGATGCCAACGGTCACGGCCATGGGTCTTCAACATGA - >TraesCS7D02G416000.2
ATGGCACAGCACGACGGCAAGCCATACCAGCCGCGCCGGGGCCCCGAGCGGCCCCCGCAGCCGGCGGAGGACCCGCCCGCGCCCGCCGCTGCGCCCGCAGCAGCGGACGCCGTGATTGACCACCTCGCGGCCGTGGCTGCCGAGGCGGAGGCGTTGAACGCGTCCATCGCGGCCGTCGCGGCCGAGGCGGAGGCGATGAACGCGTACGAGCACGCGCAGGAGCAGGAGATGGAGGAGGAAGAAGAGGAGGAGGAAGAGGAGGAAGAGGAGGAGATGGAGGAGGAGGAGGACGAGGGCGAGGGGGATGGGCAACACGAGCATGGGCAGCACGGCGGCAACGGGGAGTCCGTCCCGATGGACGCCGAGGCCGTGGCACAGGCTGCTGCTGCAGCTGCGGCCGGCGCACCGTTGGACCCGCACGGGGCGATGGTCTCTGCGATTGTGCCGCCCGCCACGGGTAACCAGCTCACCCTTTCATTTCAGGGCGAGGTCTACGTGTTCGACTCTGTTTCCCCTGATAAGGTGCAAGCTGTGCTTTTGCTGCTAGGGGGAAGGGAGCTGAACCCAGGCATGGGTGCCGGAGCATCATCATCTACTCCATACAGTAAGAGGTTGAATTTTCCACACCGGGTGGCATCGTTGATGAGGTTTAGGGAGAAGCGGAAAGAGCGGAACTTTGATAAGAAGATCCGGTATACAGTTCGCAAGGAAGTTGCACTAAGGATGCAGCGTAATAGAGGCCAATTTACATCTTCAAAACCAAAACCTGATGACGGAACTTCTGAACTGGCAACTGCAGATGGCTCCCCAAACTGGGGATCAGTGGAAGGTCGACCTCCGTCTGCTGCTTCATGCCATCACTGTGGTACTAATGCACATAATACACCTATGATGCGTCGTGGACCTGAAGGGCCAAGAACATTATGCAATGCTTGCGGCCTCATGTGGGCAAATAAGGGCATGTTGAGGGACCTATCAAAGTCTACTCCCCCATCTCTTCAAATGGTGTCAACAGGTCCAAATGATAGTAATGGAAACACCCTCTCTCAGCAGAATGGAAGCACCCTCTCTCAGCAGAATGGAAATGCTGCCATAGTGCCCTTTGCCGAGCAACAAAACCCAGCACCAGCGACCGATGCCAACGGTCACGGCCATGGGTCTTCAACATGA
Protein Sequence
- >TraesCS7D02G416000.1
MAQHDGKPYQPRRGPERPPQPAEDPPAPAAAPAAADAVIDHLAAVAAEAEALNASIAAVAAEAEAMNAYEHAQEQEMEEEEEEEEEEEEEEMEEEEDEGEGDGQHEHGQHGGNGESVPMDAEAVAQAAAAAAAGAPLDPHGAMVSAIVPPATGNQLTLSFQGEVYVFDSVSPDKVQAVLLLLGGRELNPGMGAGASSSTPYSKRLNFPHRVASLMRFREKRKERNFDKKIRYTVRKEVALRMQRNRGQFTSSKPKPDDGTSELATADGSPNWGSVEGRPPSAASCHHCGTNAHNTPMMRRGPEGPRTLCNACGLMWANKGMLRDLSKSTPPSLQMVSTGPNDSNGNTLSQQNGSTLSQQNGNAAIVPFAEQQNPAPATDANGHGHGSST - >TraesCS7D02G416000.2
MAQHDGKPYQPRRGPERPPQPAEDPPAPAAAPAAADAVIDHLAAVAAEAEALNASIAAVAAEAEAMNAYEHAQEQEMEEEEEEEEEEEEEEMEEEEDEGEGDGQHEHGQHGGNGESVPMDAEAVAQAAAAAAAGAPLDPHGAMVSAIVPPATGNQLTLSFQGEVYVFDSVSPDKVQAVLLLLGGRELNPGMGAGASSSTPYSKRLNFPHRVASLMRFREKRKERNFDKKIRYTVRKEVALRMQRNRGQFTSSKPKPDDGTSELATADGSPNWGSVEGRPPSAASCHHCGTNAHNTPMMRRGPEGPRTLCNACGLMWANKGMLRDLSKSTPPSLQMVSTGPNDSNGNTLSQQNGSTLSQQNGNAAIVPFAEQQNPAPATDANGHGHGSST