Information report for TaVRN1-5A
Gene Details
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Functional Descriptions
- Positional cloning of the wheat vernalization gene VRN1.
- VRN1 and VRN2 (unrelated to the genes with similar names in Arabidopsis) are the main genes involved in the vernalization response in diploid wheat Triticum monococcum.
- Winter wheats require several weeks at low temperature to flower. This process, vernalization, is controlled mainly by the VRN1 gene.
- The epistatic interactions between vernalization genes VRN1 and VRN2 suggested a model in which VRN2 would repress directly or indirectly the expression of AP1. A mutation in the promoter region of AP1 would result in the lack of recognition of the repressor and in a dominant spring growth habit.
- We also present the expression patterns of two MADS-box genes completely linked to VRN1 and discuss the evidence supporting one of these genes as a strong candidate gene for VRN1.
- WFZP directly activates VERNALIZATION1 (VRN1) and wheat HOMEOBOX4 (TaHOX4) to regulate the initiation and development of spikelet.
Functional Keywords
Literature and News
Gene Resources
- NCBI ID: KT696535.1
- UniProt accessions: Q5ETV1
- EMBL: AM502869 , AY747601 , JF965395
- EnsemblPlants: TraesCS5A02G391700.1
- Gramene: TraesCS5A02G391700.1
- GO: GO:0000978 , GO:0000981 , GO:0005634
- ExpressionAtlas: TraesCS5A02G391700
- InterPro: IPR002100 , IPR002487 , IPR033896
- PANTHER: PTHR48019
- SUPFAM: SSF55455
- PROSITE: PS00350 , PS50066 , PS51297
- Gene3D: 3.40.1810.10
- OrthoDB: Q5ETV1
- SMR: Q5ETV1
- CDD: cd00265
Sequences
cDNA Sequence
- >TraesCS5A02G391700.2
GTTTTGGCCTGGCCATCCTCCCTCTCCTCCCCTCTCTTCCACCTCACGTCCTCACCCAACCACCTGATAGCCATGGCTCCGCCGCCTCGCCTCCGCCTGCGCCAGTCGGAGTAGCCGTCGCGGTCTGCCGGTGTTGGAGGGTAGGGGCGTAGGGTTGGCCCGGTTCTCGAGCGGAGATGGGGCGGGGGAAGGTGCAGCTGAAGCGGATCGAGAACAAGATCAACCGGCAGGTGACCTTCTCCAAGCGCCGCTCGGGGCTTCTCAAGAAGGCGCACGAGATCTCCGTGCTCTGCGACGCCGAGGTCGGCCTCATCATCTTCTCCACCAAGGGAAAGCTCTACGAGTTCTCCACCGAGTCATGTATGGACAAAATTCTTGAACGGTATGAGCGCTATTCTTATGCAGAAAAGGTTCTCGTTTCAAGTGAATCTGAAATTCAGGGAAACTGGTGTCACGAATATAGGAAACTGAAGGCGAAGGTTGAGACAATACAGAAATGTCAAAAGCATCTCATGGGAGAGGATCTTGAATCTTTGAATCTCAAGGAGTTGCAGCAACTGGAGCAGCAGCTGGAAAGCTCACTGAAACATATCAGATCCAGGAAGAACCAACTTATGCACGAATCCATTTCTGAGCTTCAGAAGAAGGAGAGGTCACTGCAGGAGGAGAATAAAGTTCTCCAGAAGGAAAGGTCCGTGTCCCTTCCCCACAGCTCGTGGAGAAGCAGAAGGCCCATGCGGCGCAGCAAGATCAAACTCAGCCTCAAACCAGCTCTTCATCTTCTTCCTTCATGCTGA - >TraesCS5A02G391700.1
GTTTTGGCCTGGCCATCCTCCCTCTCCTCCCCTCTCTTCCACCTCACGTCCTCACCCAACCACCTGATAGCCATGGCTCCGCCGCCTCGCCTCCGCCTGCGCCAGTCGGAGTAGCCGTCGCGGTCTGCCGGTGTTGGAGGGTAGGGGCGTAGGGTTGGCCCGGTTCTCGAGCGGAGATGGGGCGGGGGAAGGTGCAGCTGAAGCGGATCGAGAACAAGATCAACCGGCAGGTGACCTTCTCCAAGCGCCGCTCGGGGCTTCTCAAGAAGGCGCACGAGATCTCCGTGCTCTGCGACGCCGAGGTCGGCCTCATCATCTTCTCCACCAAGGGAAAGCTCTACGAGTTCTCCACCGAGTCATGTATGGACAAAATTCTTGAACGGTATGAGCGCTATTCTTATGCAGAAAAGGTTCTCGTTTCAAGTGAATCTGAAATTCAGGGAAACTGGTGTCACGAATATAGGAAACTGAAGGCGAAGGTTGAGACAATACAGAAATGTCAAAAGCATCTCATGGGAGAGGATCTTGAATCTTTGAATCTCAAGGAGTTGCAGCAACTGGAGCAGCAGCTGGAAAGCTCACTGAAACATATCAGATCCAGGAAGAACCAACTTATGCACGAATCCATTTCTGAGCTTCAGAAGAAGGAGAGGTCACTGCAGGAGGAGAATAAAGTTCTCCAGAAGGAAAGGTCCGTGTCCCTTCCCCACAGCTCGTGGAGAAGCAGAAGGCCCATGCGGCGCAGCAAGATCAAACTCAGCCTCAAACCAGCTCTTCATCTTCTTCCTTCATGCTGA
CDS Sequence
- >TraesCS5A02G391700.2
ATGGGGCGGGGGAAGGTGCAGCTGAAGCGGATCGAGAACAAGATCAACCGGCAGGTGACCTTCTCCAAGCGCCGCTCGGGGCTTCTCAAGAAGGCGCACGAGATCTCCGTGCTCTGCGACGCCGAGGTCGGCCTCATCATCTTCTCCACCAAGGGAAAGCTCTACGAGTTCTCCACCGAGTCATGTATGGACAAAATTCTTGAACGGTATGAGCGCTATTCTTATGCAGAAAAGGTTCTCGTTTCAAGTGAATCTGAAATTCAGGGAAACTGGTGTCACGAATATAGGAAACTGAAGGCGAAGGTTGAGACAATACAGAAATGTCAAAAGCATCTCATGGGAGAGGATCTTGAATCTTTGAATCTCAAGGAGTTGCAGCAACTGGAGCAGCAGCTGGAAAGCTCACTGAAACATATCAGATCCAGGAAGAACCAACTTATGCACGAATCCATTTCTGAGCTTCAGAAGAAGGAGAGGTCACTGCAGGAGGAGAATAAAGTTCTCCAGAAGGAAAGGTCCGTGTCCCTTCCCCACAGCTCGTGGAGAAGCAGAAGGCCCATGCGGCGCAGCAAGATCAAACTCAGCCTCAAACCAGCTCTTCATCTTCTTCCTTCATGCTGA - >TraesCS5A02G391700.1
ATGGGGCGGGGGAAGGTGCAGCTGAAGCGGATCGAGAACAAGATCAACCGGCAGGTGACCTTCTCCAAGCGCCGCTCGGGGCTTCTCAAGAAGGCGCACGAGATCTCCGTGCTCTGCGACGCCGAGGTCGGCCTCATCATCTTCTCCACCAAGGGAAAGCTCTACGAGTTCTCCACCGAGTCATGTATGGACAAAATTCTTGAACGGTATGAGCGCTATTCTTATGCAGAAAAGGTTCTCGTTTCAAGTGAATCTGAAATTCAGGGAAACTGGTGTCACGAATATAGGAAACTGAAGGCGAAGGTTGAGACAATACAGAAATGTCAAAAGCATCTCATGGGAGAGGATCTTGAATCTTTGAATCTCAAGGAGTTGCAGCAACTGGAGCAGCAGCTGGAAAGCTCACTGAAACATATCAGATCCAGGAAGAACCAACTTATGCACGAATCCATTTCTGAGCTTCAGAAGAAGGAGAGGTCACTGCAGGAGGAGAATAAAGTTCTCCAGAAGGAAAGGTCCGTGTCCCTTCCCCACAGCTCGTGGAGAAGCAGAAGGCCCATGCGGCGCAGCAAGATCAAACTCAGCCTCAAACCAGCTCTTCATCTTCTTCCTTCATGCTGA
Protein Sequence
- >TraesCS5A02G391700.2
MGRGKVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVGLIIFSTKGKLYEFSTESCMDKILERYERYSYAEKVLVSSESEIQGNWCHEYRKLKAKVETIQKCQKHLMGEDLESLNLKELQQLEQQLESSLKHIRSRKNQLMHESISELQKKERSLQEENKVLQKERSVSLPHSSWRSRRPMRRSKIKLSLKPALHLLPSC - >TraesCS5A02G391700.1
MGRGKVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVGLIIFSTKGKLYEFSTESCMDKILERYERYSYAEKVLVSSESEIQGNWCHEYRKLKAKVETIQKCQKHLMGEDLESLNLKELQQLEQQLESSLKHIRSRKNQLMHESISELQKKERSLQEENKVLQKERSVSLPHSSWRSRRPMRRSKIKLSLKPALHLLPSC