Information report for TaTOC-A1
Gene Details
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Functional Descriptions
- The tae-miR408-Mediated Control of TaTOC1 Genes Transcription Is Required for the Regulation of Heading Time in Wheat.
- Wheat plants with a knockdown of TaTOC1s via RNA interference and overexpression of tae-miR408 showed early-heading phenotype.
- TaTOC1s expression was down-regulated by the tae-miR408 in the hexaploid wheat. In addition, other important agronomic traits in wheat, such as plant height and flag leaf angle, were regulated by both tae-miR408 and TaTOC1s.
- Our results suggested that the tae-miR408 functions in the wheat heading time by mediating TaTOC1s expression, and the study provides important new information on the mechanism underlying heading time regulation in wheat.
Functional Keywords
Literature and News
Gene Resources
- NCBI ID: KU712261.1
- UniProt accessions: W5G950
- EnsemblPlants: TraesCS6A02G227900.1
- Gramene: TraesCS6A02G227900.1
- GO: GO:0000160 , GO:0005634 , GO:0009736 , GO:0048511
- OMA: NRSCYQE
- ExpressionAtlas: TraesCS6A02G227900
- InterPro: IPR001789 , IPR010402 , IPR011006 , IPR045279
- PANTHER: PTHR43874 , PTHR43874:SF1
- SUPFAM: SSF52172
- PROSITE: PS50110 , PS51017
- Gene3D: 3.40.50.2300
- OrthoDB: W5G950
- SMR: W5G950
Sequences
cDNA Sequence
- >TraesCS6A02G227900.2
AGAGTGGACATCCCACCGTCGCAGACCAGCCACCGCCCCGAATAGTTTTAGCATACCACCAGACAATGGAGCGGGGCGGACTGCGACGAGCGGAGGCAGCCGCCGCCGGGCGCGGCCGCCGTTCCTAGCACAGGTCACTGCTGAACCGGCCGCAACCCATCATCATCCGGCCACAGGAGCTCGCCGGGAGCCGAGTTGATTGGGGGTACCAGCTGCCGCATACATGGAGGAGGAGACGTCCGCAGATCCAACAGCCGCCTCGTCCTCCTTCGTCTGCTCCTCCTCTGGCTGCGGGCTCTGCTGATTCCTCGTAACGCGCCCGTGGGAAGTCTCTGCTGATTGCGCACAGGTGGCTGCCTGGGGCTTGGGTATGGTGGGCGCCGGCGAGGGGGGTCGCGCTGGCGGCAGCGGCGCCGGGGTAGGCGGAGGGCAGCCGTTCGTGGACCGGAGCAAGGTGAGGATCCTCCTCTGCGACAGCGACCCCGACAGCTCACGGGATGTGCTTCGCCTCCTCTGCAACTGCTCCTACCAAGGTCAATTCACCTTAGGCTTGTTGTTAATCATGTGTTTGCTGCTTGCCGTTGGCCTTATTATTACTAGTACAACTAGTATCGCCATGTTGTCTTCTAATGATGTCTCTGGTGCTCGGTGGTGCTGCTTTATTTTTTCAGTAACCTGCGCCAAGTCTCCACGGCAGGTGATCAACATGCTCAACTGCGAGGGCGCTGAGATAGACATCATCCTGGCCGAGGTCGACCTGCCAGTCTCCAAGTGCTTCAAGATGCTCAAGTACATTGGCAGGAACAAGGAACTGCGCCACATCCCCATCATCATGATGTCCAACAGAGACGAGGTTTCTGTTGTTGTCAAGTGCTTGCGGCTCGGGGCAGCAGAGTACCTGGTCAAGCCGCTTCGCATGAATGAGCTGTTGAATCTCTGGACCCATGTGTGGCGAAGGAGACGGATGCTTGGTTTGGCCGAGAAAAACTTCTTCATTGACAATCTTGAGTTGGTGCTGTCGGAACCTAGTGATGCCAATACCAATAGCACCACACTCCTTTCGGACGAGACAGATGATAAGCCGAAAGGAAATAGAAATCATGAAACAAATACCTCGAGTCAACATGAATACGAGTCTCCTGCTGTGGACCCCCCCAAAACAGACCAATGGGAAAATTTACCTAGCATTGCGGAAGATGATGATAAAGCATCATCTCCAGGAGGAATGTTTTCACGCCCAATAAAGACTAATTTGAGGATAGCTGAGTCATCTGCATTTCTAGCATATGTTAAATCAAGCACTCCAGCAAACAACCCATTGGATAATGAACTACAGAGAGAGGGTAATCAGATAGATGTTATGGATCACCAGGGTAATTTCTCTGGTGCGACCGACAGAATCGACACTAATAGTAGTATAAATATTCAGGATGAAGAAGCTTTTGAGACGCCTATGCAGTATCCTTTGGTGTGCTTTTCTTCCTCTAACTTGCATCTGGAGCAAAGGAATGAGGGCCAACAAGATGTTTCAGGAAACCCTCCTGTGTATCATTACCCATTTTATTATCCAGGGATGGTAGAGCATGGCATGGCACTTCATTCAGTTCAAAGTTTCCAAGGAAACATAAACACTGCTCAAGCTCATACGCCACCAAGAATGCTCCATCAATACAATGTTTATCACCAATCCCATGGTGCATCGATGCAATCGTATCAGTATAGTCCTGCTGGTATGAATGTGCATTCAAGTCATTTGTCAACGCGGAATGTGTGGTCGTCGGTATCAAGCACACCAATTCCCGAGGAAAGACATAGTCGATCTGGCAGGAGGGCTGCAGCACTTGCAAAATTCAGGCAGAAAAGGAAGGACCGCTGTTTTGACAAGAAGGTGAGGTATGTTAATCGGAAGAAAGTTGCTGAAACAAGGCCGAGGGTGCGGGGTCAGTTTGTTAGGCAGGCAAGCAACACAGATATAATTAGCACTGGTGATGATATATCTGAATATGAAGACGATGATCCATCCTCCAGGGACGTTGAGTTGGTTTCTTCACCAGAATAGCTGAAAGGTCATATTATATGTGGAGTGGTGTGCGGATGATCATTGCTTACTTTGCAACTCAGTACACATATGCAATACATTATTCCCGCTAATAGCAATGCATCATTTTGCTTTCACAATACATCCTCAACCCCCCAACCCCTCAAAAGAACTTGTGGCATATGTATGGATATTGTGGACATTTTGAGCAATTGTATTTTGACAATGTAAGTTAGTATCACTAGTCAGTGATACACATGGCATTATAACCTCTTTGTCTCTGCGCTTGTCTAGTTTCATTGTCTCTGTTCTTTAATACTACACATAATATTTGTTTTCACCAAATGCAAGTTGAAGAGCACCAT - >TraesCS6A02G227900.1
AGAGTGGACATCCCACCGTCGCAGACCAGCCACCGCCCCGAATAGTTTTAGCATACCACCAGACAATGGAGCGGGGCGGACTGCGACGAGCGGAGGCAGCCGCCGCCGGGCGCGGCCGCCGTTCCTAGCACAGGTCACTGCTGAACCGGCCGCAACCCATCATCATCCGGCCACAGGAGCTCGCCGGGAGCCGAGTTGATTGGGGGTACCAGCTGCCGCATACATGGAGGAGGAGACGTCCGCAGATCCAACAGCCGCCTCGTCCTCCTTCGTCTGCTCCTCCTCTGGCTGCGGGCTCTGCTGATTCCTCGTAACGCGCCCGTGGGAAGTCTCTGCTGATTGCGCACAGGTGGCTGCCTGGGGCTTGGGTATGGTGGGCGCCGGCGAGGGGGGTCGCGCTGGCGGCAGCGGCGCCGGGGTAGGCGGAGGGCAGCCGTTCGTGGACCGGAGCAAGGTGAGGATCCTCCTCTGCGACAGCGACCCCGACAGCTCACGGGATGTGCTTCGCCTCCTCTGCAACTGCTCCTACCAAGGTCAATTCACCTTAGGCTTGTTGTTAATCATGTGTTTGCTGCTTGCCGTTGGCCTTATTATTACTAGTACAACTAGTATCGCCATGTTGTCTTCTAATGATGTCTCTGGTGCTCGGTGGTGCTGCTTTATTTTTTCAGTAACCTGCGCCAAGTCTCCACGGCAGGTGATCAACATGCTCAACTGCGAGGGCGCTGAGATAGACATCATCCTGGCCGAGGTCGACCTGCCAGTCTCCAAGTGCTTCAAGATGCTCAAGTACATTGGCAGGAACAAGGAACTGCGCCACATCCCCATCATCATGATGTCCAACAGAGACGAGGTTTCTGTTGTTGTCAAGTGCTTGCGGCTCGGGGCAGCAGAGTACCTGGTCAAGCCGCTTCGCATGAATGAGCTGTTGAATCTCTGGACCCATGTGTGGCGAAGGAGACGGATGCTTGGTTTGGCCGAGAAAAACTTCTTCATTGACAATCTTGAGTTGGTGCTGTCGGAACCTAGTGATGCCAATACCAATAGCACCACACTCCTTTCGGACGAGACAGATGATAAGCCGAAAGGAAATAGAAATCATGAAACAAATACCTCGAGTCAACATGAATACGAGTCTCCTGCTGTGGACCCCCCCAAAACAGACCAATGGGAAAATTTACCTAGCATTGCGGAAGATGATGATAAAGCATCATCTCCAGGAGGAATGTTTTCACGCCCAATAAAGACTAATTTGAGGATAGCTGAGTCATCTGCATTTCTAGCATATGTTAAATCAAGCACTCCAGCAAACAACCCATTGGATAATGAACTACAGAGAGAGGGTAATCAGATAGATGTTATGGATCACCAGGGTAATTTCTCTGGTGCGACCGACAGAATCGACACTAATAGTAGTATAAATATTCAGGATGAAGAAGCTTTTGAGACGCCTATGCAGTATCCTTTGGTGTGCTTTTCTTCCTCTAACTTGCATCTGGAGCAAAGGAATGAGGGCCAACAAGATGTTTCAGGAAACCCTCCTGTGTATCATTACCCATTTTATTATCCAGGGATGGTAGAGCATGGCATGGCACTTCATTCAGTTCAAAGTTTCCAAGGAAACATAAACACTGCTCAAGCTCATACGCCACCAAGAATGCTCCATCAATACAATGTTTATCACCAATCCCATGGTGCATCGATGCAATCGTATCAGTATAGTCCTGCTGGTATGAATGTGCATTCAAGTCATTTGTCAACGCGGAATGTGTGGTCGTCGGTATCAAGCACACCAATTCCCGAGGAAAGACATAGTCGATCTGGCAGGAGGGCTGCAGCACTTGCAAAATTCAGGCAGAAAAGGAAGGACCGCTGTTTTGACAAGAAGGTGAGGTATGTTAATCGGAAGAAAGTTGCTGAAACAAGGCCGAGGGTGCGGGGTCAGTTTGTTAGGCAGGCAAGCAACACAGATATAATTAGCACTGGTGATGATATATCTGAATATGAAGACGATGATCCATCCTCCAGGGACGTTGAGTTGGTTTCTTCACCAGAATAGCTGAAAGGTCATATTATATGTGGAGTGGTGTGCGGATGATCATTGCTTACTTTGCAACTCAGTACACATATGCAATACATTATTCCCGCTAATAGCAATGCATCATTTTGCTTTCACAATACATCCTCAACCCCCCAACCCCTCAAAAGAACTTGTGGCATATGTATGGATATTGTGGACATTTTGAGCAATTGTATTTTGACAATGTAAGTTAGTATCACTAGTCAGTGATACACATGGCATTATAACCTCTTTGTCTCTGCGCTTGTCTAGTTTCATTGTCTCTGTTCTTTAATACTACACATAATATTTGTTTTCACCAAATGCAAGTTGAAGAGCACCAT
CDS Sequence
- >TraesCS6A02G227900.2
ATGGTGGGCGCCGGCGAGGGGGGTCGCGCTGGCGGCAGCGGCGCCGGGGTAGGCGGAGGGCAGCCGTTCGTGGACCGGAGCAAGGTGAGGATCCTCCTCTGCGACAGCGACCCCGACAGCTCACGGGATGTGCTTCGCCTCCTCTGCAACTGCTCCTACCAAGGTCAATTCACCTTAGGCTTGTTGTTAATCATGTGTTTGCTGCTTGCCGTTGGCCTTATTATTACTAGTACAACTAGTATCGCCATGTTGTCTTCTAATGATGTCTCTGGTGCTCGGTGGTGCTGCTTTATTTTTTCAGTAACCTGCGCCAAGTCTCCACGGCAGGTGATCAACATGCTCAACTGCGAGGGCGCTGAGATAGACATCATCCTGGCCGAGGTCGACCTGCCAGTCTCCAAGTGCTTCAAGATGCTCAAGTACATTGGCAGGAACAAGGAACTGCGCCACATCCCCATCATCATGATGTCCAACAGAGACGAGGTTTCTGTTGTTGTCAAGTGCTTGCGGCTCGGGGCAGCAGAGTACCTGGTCAAGCCGCTTCGCATGAATGAGCTGTTGAATCTCTGGACCCATGTGTGGCGAAGGAGACGGATGCTTGGTTTGGCCGAGAAAAACTTCTTCATTGACAATCTTGAGTTGGTGCTGTCGGAACCTAGTGATGCCAATACCAATAGCACCACACTCCTTTCGGACGAGACAGATGATAAGCCGAAAGGAAATAGAAATCATGAAACAAATACCTCGAGTCAACATGAATACGAGTCTCCTGCTGTGGACCCCCCCAAAACAGACCAATGGGAAAATTTACCTAGCATTGCGGAAGATGATGATAAAGCATCATCTCCAGGAGGAATGTTTTCACGCCCAATAAAGACTAATTTGAGGATAGCTGAGTCATCTGCATTTCTAGCATATGTTAAATCAAGCACTCCAGCAAACAACCCATTGGATAATGAACTACAGAGAGAGGGTAATCAGATAGATGTTATGGATCACCAGGGTAATTTCTCTGGTGCGACCGACAGAATCGACACTAATAGTAGTATAAATATTCAGGATGAAGAAGCTTTTGAGACGCCTATGCAGTATCCTTTGGTGTGCTTTTCTTCCTCTAACTTGCATCTGGAGCAAAGGAATGAGGGCCAACAAGATGTTTCAGGAAACCCTCCTGTGTATCATTACCCATTTTATTATCCAGGGATGGTAGAGCATGGCATGGCACTTCATTCAGTTCAAAGTTTCCAAGGAAACATAAACACTGCTCAAGCTCATACGCCACCAAGAATGCTCCATCAATACAATGTTTATCACCAATCCCATGGTGCATCGATGCAATCGTATCAGTATAGTCCTGCTGGTATGAATGTGCATTCAAGTCATTTGTCAACGCGGAATGTGTGGTCGTCGGTATCAAGCACACCAATTCCCGAGGAAAGACATAGTCGATCTGGCAGGAGGGCTGCAGCACTTGCAAAATTCAGGCAGAAAAGGAAGGACCGCTGTTTTGACAAGAAGGTGAGGTATGTTAATCGGAAGAAAGTTGCTGAAACAAGGCCGAGGGTGCGGGGTCAGTTTGTTAGGCAGGCAAGCAACACAGATATAATTAGCACTGGTGATGATATATCTGAATATGAAGACGATGATCCATCCTCCAGGGACGTTGAGTTGGTTTCTTCACCAGAATAG - >TraesCS6A02G227900.1
ATGGTGGGCGCCGGCGAGGGGGGTCGCGCTGGCGGCAGCGGCGCCGGGGTAGGCGGAGGGCAGCCGTTCGTGGACCGGAGCAAGGTGAGGATCCTCCTCTGCGACAGCGACCCCGACAGCTCACGGGATGTGCTTCGCCTCCTCTGCAACTGCTCCTACCAAGGTCAATTCACCTTAGGCTTGTTGTTAATCATGTGTTTGCTGCTTGCCGTTGGCCTTATTATTACTAGTACAACTAGTATCGCCATGTTGTCTTCTAATGATGTCTCTGGTGCTCGGTGGTGCTGCTTTATTTTTTCAGTAACCTGCGCCAAGTCTCCACGGCAGGTGATCAACATGCTCAACTGCGAGGGCGCTGAGATAGACATCATCCTGGCCGAGGTCGACCTGCCAGTCTCCAAGTGCTTCAAGATGCTCAAGTACATTGGCAGGAACAAGGAACTGCGCCACATCCCCATCATCATGATGTCCAACAGAGACGAGGTTTCTGTTGTTGTCAAGTGCTTGCGGCTCGGGGCAGCAGAGTACCTGGTCAAGCCGCTTCGCATGAATGAGCTGTTGAATCTCTGGACCCATGTGTGGCGAAGGAGACGGATGCTTGGTTTGGCCGAGAAAAACTTCTTCATTGACAATCTTGAGTTGGTGCTGTCGGAACCTAGTGATGCCAATACCAATAGCACCACACTCCTTTCGGACGAGACAGATGATAAGCCGAAAGGAAATAGAAATCATGAAACAAATACCTCGAGTCAACATGAATACGAGTCTCCTGCTGTGGACCCCCCCAAAACAGACCAATGGGAAAATTTACCTAGCATTGCGGAAGATGATGATAAAGCATCATCTCCAGGAGGAATGTTTTCACGCCCAATAAAGACTAATTTGAGGATAGCTGAGTCATCTGCATTTCTAGCATATGTTAAATCAAGCACTCCAGCAAACAACCCATTGGATAATGAACTACAGAGAGAGGGTAATCAGATAGATGTTATGGATCACCAGGGTAATTTCTCTGGTGCGACCGACAGAATCGACACTAATAGTAGTATAAATATTCAGGATGAAGAAGCTTTTGAGACGCCTATGCAGTATCCTTTGGTGTGCTTTTCTTCCTCTAACTTGCATCTGGAGCAAAGGAATGAGGGCCAACAAGATGTTTCAGGAAACCCTCCTGTGTATCATTACCCATTTTATTATCCAGGGATGGTAGAGCATGGCATGGCACTTCATTCAGTTCAAAGTTTCCAAGGAAACATAAACACTGCTCAAGCTCATACGCCACCAAGAATGCTCCATCAATACAATGTTTATCACCAATCCCATGGTGCATCGATGCAATCGTATCAGTATAGTCCTGCTGGTATGAATGTGCATTCAAGTCATTTGTCAACGCGGAATGTGTGGTCGTCGGTATCAAGCACACCAATTCCCGAGGAAAGACATAGTCGATCTGGCAGGAGGGCTGCAGCACTTGCAAAATTCAGGCAGAAAAGGAAGGACCGCTGTTTTGACAAGAAGGTGAGGTATGTTAATCGGAAGAAAGTTGCTGAAACAAGGCCGAGGGTGCGGGGTCAGTTTGTTAGGCAGGCAAGCAACACAGATATAATTAGCACTGGTGATGATATATCTGAATATGAAGACGATGATCCATCCTCCAGGGACGTTGAGTTGGTTTCTTCACCAGAATAG
Protein Sequence
- >TraesCS6A02G227900.2
MVGAGEGGRAGGSGAGVGGGQPFVDRSKVRILLCDSDPDSSRDVLRLLCNCSYQGQFTLGLLLIMCLLLAVGLIITSTTSIAMLSSNDVSGARWCCFIFSVTCAKSPRQVINMLNCEGAEIDIILAEVDLPVSKCFKMLKYIGRNKELRHIPIIMMSNRDEVSVVVKCLRLGAAEYLVKPLRMNELLNLWTHVWRRRRMLGLAEKNFFIDNLELVLSEPSDANTNSTTLLSDETDDKPKGNRNHETNTSSQHEYESPAVDPPKTDQWENLPSIAEDDDKASSPGGMFSRPIKTNLRIAESSAFLAYVKSSTPANNPLDNELQREGNQIDVMDHQGNFSGATDRIDTNSSINIQDEEAFETPMQYPLVCFSSSNLHLEQRNEGQQDVSGNPPVYHYPFYYPGMVEHGMALHSVQSFQGNINTAQAHTPPRMLHQYNVYHQSHGASMQSYQYSPAGMNVHSSHLSTRNVWSSVSSTPIPEERHSRSGRRAAALAKFRQKRKDRCFDKKVRYVNRKKVAETRPRVRGQFVRQASNTDIISTGDDISEYEDDDPSSRDVELVSSPE - >TraesCS6A02G227900.1
MVGAGEGGRAGGSGAGVGGGQPFVDRSKVRILLCDSDPDSSRDVLRLLCNCSYQGQFTLGLLLIMCLLLAVGLIITSTTSIAMLSSNDVSGARWCCFIFSVTCAKSPRQVINMLNCEGAEIDIILAEVDLPVSKCFKMLKYIGRNKELRHIPIIMMSNRDEVSVVVKCLRLGAAEYLVKPLRMNELLNLWTHVWRRRRMLGLAEKNFFIDNLELVLSEPSDANTNSTTLLSDETDDKPKGNRNHETNTSSQHEYESPAVDPPKTDQWENLPSIAEDDDKASSPGGMFSRPIKTNLRIAESSAFLAYVKSSTPANNPLDNELQREGNQIDVMDHQGNFSGATDRIDTNSSINIQDEEAFETPMQYPLVCFSSSNLHLEQRNEGQQDVSGNPPVYHYPFYYPGMVEHGMALHSVQSFQGNINTAQAHTPPRMLHQYNVYHQSHGASMQSYQYSPAGMNVHSSHLSTRNVWSSVSSTPIPEERHSRSGRRAAALAKFRQKRKDRCFDKKVRYVNRKKVAETRPRVRGQFVRQASNTDIISTGDDISEYEDDDPSSRDVELVSSPE