Information report for TaSD1-3A
Gene Details
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Functional Descriptions
- TaSD1-3A was located in QRC-3A-IV, and there were only two haplotypes in 677 bread wheat resequencing data, which were related to gibber metabolism.
- Release the potential for reducing plant height of TaSD1 in wheat.
- TaSD1 had not been widely utilized in wheat due to lack of alleles.
- TaSD1 was regulated by DELLA in wheat.
- Three homeologues of TaSD1 have no differences in the stem among TNL, Rht-B1b-OE and Rht-B1b-KO lines, which allow breeders breeding semi-dwarf wheat combined TaSD1 with Rht-B1b.
Functional Keywords
- stem , breeding , dwarf , height , plant-height
Literature and News
Gene Resources
- NCBI ID: 123062941
- UniProt accessions: A0A3B6ERX3
- EnsemblPlants: TraesCS3A02G406200.1
- Gramene: TraesCS3A02G406200.1
- GO: GO:0009416 , GO:0009686 , GO:0009826 , GO:0009908
- OMA: FCDAMNG
- InterPro: IPR005123 , IPR026992 , IPR027443 , IPR044861 , IPR050231
- PANTHER: PTHR47990
- SUPFAM: SSF51197
- PROSITE: PS51471
- Gene3D: 2.60.120.330
- OrthoDB: A0A3B6ERX3
- SMR: A0A3B6ERX3
Sequences
cDNA Sequence
- >TraesCS3A02G406200.1
ATGCCAGACAGCTCTCCCGCACACTCACTCGCAGCTAGCTCACACGCCTCTCATCTCATGGTGCTCCAGACCGCTCAGCAAGAACCATCCCTCACGCGTCCGCCTCACTGCAGCGCCGCCAGCGCGCGCTCGCCTGCGGCCATGGACACCAGCCCTGCAACTCCCCTGCTCCTCCAGCCTCCCGCTCCCAGCATTGACCCGTTCGCCGCCAAGGCGGCCGTCAACAAGAACGGCGGCGCGGCCACCGCGGTGTACGACCTCCGGAGGGAGCCGAAGATCCCCGCCCCGTTTGTGTGGCCCCACGCCGAGGTGCGCCCCACCACGGCCGAGGAGCTGGCCGTGCCGGTGGTGGACGTGGGCGTGCTGCGCAATGGCGACGCCGCAGGGCTCCGCCGCGCCGTGGCGCAGGTGGCCGCGGCGTGCGCCACGCACGGGTTCTTCCAGGTGTCCGGGCACGGCGTGGACGACGCCCTGGCGCGCGCGGCGCTGGACGGCGCGAGCGGCTTCTTCGGGCTGCCGCTGGCCGAGAAGCAGCGCGCGCGGCGCGTCCCGGGGACCGTGTCCGGGTACACGAGCGCGCACGCGGACCGGTTCGCCTCCAAGCTCCCCTGGAAGGAGACCCTCTCCTTCGGCTTCCACGACCGCGCCGGCGCCGCGCCCGTCGTGGTGGACTACTTCACCAGCACCCTCGGGCCGGACTACGAGCCAATGGGGAGGGTGTACCAGGAGTACTGCGAGAAGATGAAGGAGCTGTCGCTGAGGATCATGGAGCTGCTGGAGCTGGGCCTGGGGGTGGAGAAGCGCGGGTACTACCGGGACTTCTTCGCGGACAGCAGCTCCATCATGCGGTGCAACTACTACCCGCCGTGCCCGGAGCCGGAGCGCACGCTGGGGACGGGCCCGCACTGCGACCCCACGGCGCTCACCATCCTGCTGCAGGACGACGTAGGCGGGCTGGAGGTCCTCGTCGACGGCGACTGGCGGCCCGTCCGCCCCGTCCCCGGCGCCATGGTCATCAACATCGGCGACACCTTCATGGCGCTGTCGAACGGGCGGTACAAGAGCTGCCTGCACCGGGCGGTGGTGAACCGGCGGCAGGAGCGGCGGTCGCTGGCCTTCTTCCTGTGCCCGCGCGAGGACCGCGTGGTGCGGCCGCCGCCGGGCCTGAGGAGCCCGCGGCGGTACCCGGACTTCACCTGGGCCGACCTCATGCGCTTCACGCAGCGCCACTACCGCGCCGACACGCGCACCCTCGACGCCTTCACCCAGTGGTTCTCCTCCTCCACCTCGCCGCCGCCGCCCGCCCCGGCGGCCCAGCAGGCGGCCTGATCGCCTCGCCTGACCCGATCGATCCACGGGCTGATTCGCCCCGAGGATCGCGACGCGGAATTTTTGTCGGGACCAGCCCACGTGCGCGCGCGCCCCCCTCTCAGGTGCGGTGGGCCCGGGCGGAGTGGTGCCCACGTGGATTTCCGGCCCCACACCACCTTCCATTTTTGGACGCTGGCTCGCGTTCCCTCCTCCTAGCCTTGTTTGTCACGACTCGCCATATGCATGCCCCCTTCTCGCCTCACCTAGTGTACATACCATGGAAATCATGGAATATATATATAATATATATAAACGCATTTCATGCCTTTGCTT
CDS Sequence
- >TraesCS3A02G406200.1
ATGCCAGACAGCTCTCCCGCACACTCACTCGCAGCTAGCTCACACGCCTCTCATCTCATGGTGCTCCAGACCGCTCAGCAAGAACCATCCCTCACGCGTCCGCCTCACTGCAGCGCCGCCAGCGCGCGCTCGCCTGCGGCCATGGACACCAGCCCTGCAACTCCCCTGCTCCTCCAGCCTCCCGCTCCCAGCATTGACCCGTTCGCCGCCAAGGCGGCCGTCAACAAGAACGGCGGCGCGGCCACCGCGGTGTACGACCTCCGGAGGGAGCCGAAGATCCCCGCCCCGTTTGTGTGGCCCCACGCCGAGGTGCGCCCCACCACGGCCGAGGAGCTGGCCGTGCCGGTGGTGGACGTGGGCGTGCTGCGCAATGGCGACGCCGCAGGGCTCCGCCGCGCCGTGGCGCAGGTGGCCGCGGCGTGCGCCACGCACGGGTTCTTCCAGGTGTCCGGGCACGGCGTGGACGACGCCCTGGCGCGCGCGGCGCTGGACGGCGCGAGCGGCTTCTTCGGGCTGCCGCTGGCCGAGAAGCAGCGCGCGCGGCGCGTCCCGGGGACCGTGTCCGGGTACACGAGCGCGCACGCGGACCGGTTCGCCTCCAAGCTCCCCTGGAAGGAGACCCTCTCCTTCGGCTTCCACGACCGCGCCGGCGCCGCGCCCGTCGTGGTGGACTACTTCACCAGCACCCTCGGGCCGGACTACGAGCCAATGGGGAGGGTGTACCAGGAGTACTGCGAGAAGATGAAGGAGCTGTCGCTGAGGATCATGGAGCTGCTGGAGCTGGGCCTGGGGGTGGAGAAGCGCGGGTACTACCGGGACTTCTTCGCGGACAGCAGCTCCATCATGCGGTGCAACTACTACCCGCCGTGCCCGGAGCCGGAGCGCACGCTGGGGACGGGCCCGCACTGCGACCCCACGGCGCTCACCATCCTGCTGCAGGACGACGTAGGCGGGCTGGAGGTCCTCGTCGACGGCGACTGGCGGCCCGTCCGCCCCGTCCCCGGCGCCATGGTCATCAACATCGGCGACACCTTCATGGCGCTGTCGAACGGGCGGTACAAGAGCTGCCTGCACCGGGCGGTGGTGAACCGGCGGCAGGAGCGGCGGTCGCTGGCCTTCTTCCTGTGCCCGCGCGAGGACCGCGTGGTGCGGCCGCCGCCGGGCCTGAGGAGCCCGCGGCGGTACCCGGACTTCACCTGGGCCGACCTCATGCGCTTCACGCAGCGCCACTACCGCGCCGACACGCGCACCCTCGACGCCTTCACCCAGTGGTTCTCCTCCTCCACCTCGCCGCCGCCGCCCGCCCCGGCGGCCCAGCAGGCGGCCTGA
Protein Sequence
- >TraesCS3A02G406200.1
MPDSSPAHSLAASSHASHLMVLQTAQQEPSLTRPPHCSAASARSPAAMDTSPATPLLLQPPAPSIDPFAAKAAVNKNGGAATAVYDLRREPKIPAPFVWPHAEVRPTTAEELAVPVVDVGVLRNGDAAGLRRAVAQVAAACATHGFFQVSGHGVDDALARAALDGASGFFGLPLAEKQRARRVPGTVSGYTSAHADRFASKLPWKETLSFGFHDRAGAAPVVVDYFTSTLGPDYEPMGRVYQEYCEKMKELSLRIMELLELGLGVEKRGYYRDFFADSSSIMRCNYYPPCPEPERTLGTGPHCDPTALTILLQDDVGGLEVLVDGDWRPVRPVPGAMVINIGDTFMALSNGRYKSCLHRAVVNRRQERRSLAFFLCPREDRVVRPPPGLRSPRRYPDFTWADLMRFTQRHYRADTRTLDAFTQWFSSSTSPPPPAPAAQQAA