Gene Details:
- Gene ID: TraesCS5A02G308400
- Gene Symbol: TaRF2b
- Gene Name: bZIP transcription factor 29-like
- Genome: Chinese_Spring1.0
- Species: Triticum aestivum
Functional Descriptions:
- The TaRF2b mutants exhibited delayed flowering, whereas transgenic wheat lines overexpressing TaRF2b showed earlier flowering.
- TaRF2b accelerates winter wheat flowering by regulating the expression of TaVRN1.
- The vernalization-induced long non-coding RNA VAS functions with the transcription factor TaRF2b to promote TaVRN1 expression for flowering in hexaploid wheat.
- TaRF2b recognizes the Sp1 motif within the TaVRN1 proximal promoter region, which is gradually exposed along with the disruption of a loop structure at the TaVRN1 locus during vernalization, to activate the transcription of TaVRN1.
Function-related keywords:
Literature:
- The vernalization-induced long non-coding RNA VAS functions with the transcription factor TaRF2b to promote TaVRN1 expression for flowering in hexaploid wheat. DOI: 10.1016/j.molp.2021.05.026 ; PMID: 34052392
Related News:
Gene Resources:
- NCBI ID: 123122225
- UniProt accessions: A0A3B6KMJ8
Sequences:
cDNA Sequence
- >TraesCS5A02G308400.1
ATGGACGACAACTCCGCGCACCGCCGCCACCTCCTCCCACTGCCGGGCCCACATGGACGCCCCCGCGCACCGCCGCCGCGTCCTCCGGCTGCCGGGCCCACATGGACGCCTACCACTAGACAGTCCATGCGTGTTCGCCCTCTCATCCCATCGCCACCGACCTCTCATCCCGCCGCCGCCGACCTCTCCTCCTCCATACACCGCCTCCAGCCCTCGCTCCGACTCCCGCCGGCCCACCCTGCCTCCGTAGCCGCCCGTTTCGTCCCGGGCTTCGGCTACTACCGCGTGCCCCCGCCGCCACCGCCGCCGCTGCCGCCGGCGGCGAGCGGTGGCGCAGGATCCCATCACTCGCGCTCGCTGTCGCAACCCCAGTTCTTCTCCATGGACTTTCTCTTCCGGCCCCCGTACCCCGATCCGTCTGCGCCATCAGCGATCGCGCTCTCCCCGCCGCCGCCGTCGGGCTCAGACCGGGGGGCGTCCGGACTGCCGCCGCCGTCGGGCTCCGAGCGGGGGGCGTCCAGACTGCCGCCGCTGCGGGCGGGGCATCAGCGGTCGCAGAGCGACGTTCTCCTCGCGTTCTCCTCCCAGCAGAACCTGCCCATGCCACCTCCGGCGCCGGTGAACGCGGAGGCCCTGGTGGCCGCGAACAACAGCACCCTCGACGGGATCCTCGGCGCCTACAACAAGAGTACGAATGGCCTGGGCGCGGTCGGCTCCTCCGGGCCCGTCGGCCAGGAGCAGCGCGACCAGCTGGACAGCCAAGCGCCCGCTTGGAGCCCCGGTGACAGCAGCGAGAACGAAGCCGAGAGCGCGGACGGCAGCTTGCCCAGGCATTGCCGCAGCTTGTCGGCGGACAGCCTTGTAGGGAAGTTCAAGTTTGGACCGTCCGGCCTGGAGCCGTCCAACTCCAACTCCAACTCCAACCCGCCGCCTCCATCTCCGGGTCCGGGGCCGGGTGCTGCTGCTCGGCTGGCACGCAGTGGAAGTGGTTCCATTGGTGGCGCCGCTGCTCTCTTCGCCAAGGAATTCGCAAACAGTAAGGAATTCAGTGAAGCAGAGAAGAAGGTTATCATGGACAGTGAGCACCTCGCGCAGATTGTGCTGACCGATCCTAAGAGGGTCAGGAGGATCCTAAACAATCGGCTGTCTGCTGCTAAGTCAAAGGAGCGCAAGGCAAAATACATAGTGGAGCTTGAGGGCAAGGTTCAGGTGCTGCAGGGGGAGACTATGAACTTATCTGCACAAGTGAAAATGGTTAAGAAGGGCCAGGCTAGGCTTTCAATTCACAACCATGAGATGAGAATCAGGCTGCAAGCTTTGGAGGAGCAAGCACAGTTGAAAAAGGCTCTGAACGAAGCATTGCATGCTGAGGTCGAACGCCTAAATCTGGTTGTTGCCGAGGCCAGTAATCCTCATATGCCGAACAGTTCAGAGCAACGGATGAGCTCCCAGATGATTCAGCTTCACCAGCTGCAAATTCTGAGGCAACCATCACAGCTCCAGCAAGGTCAGCAACGCCAGCGGAACTTCTAGGATGCTTTCCCAAATGAGATCTTCCAAGGGAAATTTGATACGACAGATTCGGTTAAAAATACCATATGCTCTGGACAATACTTTACTTAGGTCGCGGGAAACAACCATAGGAAGAAAAAAAAACCATCTCTTGTTGTGTCGAAATTATTTTTGTTCAATCCTGGGAAAAACTCCGGTCGATTTTTGAACTGTATAAAGTGTCTGTCTG
CDS Sequence
- >TraesCS5A02G308400.1
ATGGACGACAACTCCGCGCACCGCCGCCACCTCCTCCCACTGCCGGGCCCACATGGACGCCCCCGCGCACCGCCGCCGCGTCCTCCGGCTGCCGGGCCCACATGGACGCCTACCACTAGACAGTCCATGCGTGTTCGCCCTCTCATCCCATCGCCACCGACCTCTCATCCCGCCGCCGCCGACCTCTCCTCCTCCATACACCGCCTCCAGCCCTCGCTCCGACTCCCGCCGGCCCACCCTGCCTCCGTAGCCGCCCGTTTCGTCCCGGGCTTCGGCTACTACCGCGTGCCCCCGCCGCCACCGCCGCCGCTGCCGCCGGCGGCGAGCGGTGGCGCAGGATCCCATCACTCGCGCTCGCTGTCGCAACCCCAGTTCTTCTCCATGGACTTTCTCTTCCGGCCCCCGTACCCCGATCCGTCTGCGCCATCAGCGATCGCGCTCTCCCCGCCGCCGCCGTCGGGCTCAGACCGGGGGGCGTCCGGACTGCCGCCGCCGTCGGGCTCCGAGCGGGGGGCGTCCAGACTGCCGCCGCTGCGGGCGGGGCATCAGCGGTCGCAGAGCGACGTTCTCCTCGCGTTCTCCTCCCAGCAGAACCTGCCCATGCCACCTCCGGCGCCGGTGAACGCGGAGGCCCTGGTGGCCGCGAACAACAGCACCCTCGACGGGATCCTCGGCGCCTACAACAAGAGTACGAATGGCCTGGGCGCGGTCGGCTCCTCCGGGCCCGTCGGCCAGGAGCAGCGCGACCAGCTGGACAGCCAAGCGCCCGCTTGGAGCCCCGGTGACAGCAGCGAGAACGAAGCCGAGAGCGCGGACGGCAGCTTGCCCAGGCATTGCCGCAGCTTGTCGGCGGACAGCCTTGTAGGGAAGTTCAAGTTTGGACCGTCCGGCCTGGAGCCGTCCAACTCCAACTCCAACTCCAACCCGCCGCCTCCATCTCCGGGTCCGGGGCCGGGTGCTGCTGCTCGGCTGGCACGCAGTGGAAGTGGTTCCATTGGTGGCGCCGCTGCTCTCTTCGCCAAGGAATTCGCAAACAGTAAGGAATTCAGTGAAGCAGAGAAGAAGGTTATCATGGACAGTGAGCACCTCGCGCAGATTGTGCTGACCGATCCTAAGAGGGTCAGGAGGATCCTAAACAATCGGCTGTCTGCTGCTAAGTCAAAGGAGCGCAAGGCAAAATACATAGTGGAGCTTGAGGGCAAGGTTCAGGTGCTGCAGGGGGAGACTATGAACTTATCTGCACAAGTGAAAATGGTTAAGAAGGGCCAGGCTAGGCTTTCAATTCACAACCATGAGATGAGAATCAGGCTGCAAGCTTTGGAGGAGCAAGCACAGTTGAAAAAGGCTCTGAACGAAGCATTGCATGCTGAGGTCGAACGCCTAAATCTGGTTGTTGCCGAGGCCAGTAATCCTCATATGCCGAACAGTTCAGAGCAACGGATGAGCTCCCAGATGATTCAGCTTCACCAGCTGCAAATTCTGAGGCAACCATCACAGCTCCAGCAAGGTCAGCAACGCCAGCGGAACTTCTAG
Protein Sequence
- >TraesCS5A02G308400.1
MDDNSAHRRHLLPLPGPHGRPRAPPPRPPAAGPTWTPTTRQSMRVRPLIPSPPTSHPAAADLSSSIHRLQPSLRLPPAHPASVAARFVPGFGYYRVPPPPPPPLPPAASGGAGSHHSRSLSQPQFFSMDFLFRPPYPDPSAPSAIALSPPPPSGSDRGASGLPPPSGSERGASRLPPLRAGHQRSQSDVLLAFSSQQNLPMPPPAPVNAEALVAANNSTLDGILGAYNKSTNGLGAVGSSGPVGQEQRDQLDSQAPAWSPGDSSENEAESADGSLPRHCRSLSADSLVGKFKFGPSGLEPSNSNSNSNPPPPSPGPGPGAAARLARSGSGSIGGAAALFAKEFANSKEFSEAEKKVIMDSEHLAQIVLTDPKRVRRILNNRLSAAKSKERKAKYIVELEGKVQVLQGETMNLSAQVKMVKKGQARLSIHNHEMRIRLQALEEQAQLKKALNEALHAEVERLNLVVAEASNPHMPNSSEQRMSSQMIQLHQLQILRQPSQLQQGQQRQRNF