Information report for TaQsd1-5D
Gene Details
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Functional Descriptions
- TaQsd1 is a orthologous genes of barley Qsd1 regulate seed dormancy levels in wheat.
- We identified orthologous sequences of the major Hordeum vulgare (barley) seed dormancy gene Qsd1 in hexaploid wheat cv. Chinese Spring by performing genomic clone sequencing, followed by transcript sequencing.
- Genome-Edited Triple-Recessive Mutation of TaQsd1 Alters Seed Dormancy in Wheat.
Functional Keywords
Literature and News
Gene Resources
- NCBI ID: 123121568
- UniProt accessions: W5FWW5
- EMBL: LC209617 , LC209619 , LC209826 , LC209829
- EnsemblPlants: TraesCS5D02G224200.1
- Gramene: TraesCS5D02G224200.1
- GO: GO:0004021 , GO:0009058 , GO:0030170 , GO:0042853
- OMA: KIKVMIP
- ExpressionAtlas: TraesCS5D02G224200
- InterPro: IPR004839 , IPR015421 , IPR015422 , IPR015424 , IPR045088
- PANTHER: PTHR11751 , PTHR11751:SF440
- SUPFAM: SSF53383
- Gene3D: 1.10.287.1970 , 3.40.640.10 , 3.90.1150.10
- OrthoDB: W5FWW5
- SMR: W5FWW5
- CDD: cd00609
Sequences
cDNA Sequence
- >TraesCS5D02G224200.1
ACTCTCTGCATCCTCCCCTCCCCTCTCCTCTGCGCCACCTTAGCCAAGCTCTCCTCCTTCCTTCCCCGCCTGCGTTCTCTCCTCGCCGGCGCCGCCCCGCGCCATGTCGTACAACAAGACGGCGTCCATCACCGCGGAGACCATAAACCCCAAGGTGAAGATCTTCGACTACGAGCCCTGCGGAGAGATCGCCAGGCACGCAGAGAGGTTGGAGCAGGAGATGGAGAAGAGCCCAGGTTCTCGCCCTTTTCCAGAGATAACATACTGCAACCTTGGGAACCCCCAGGCTCTCGGCCAGCGACCCATAACCTTCTTCCGTGAGGTTCTTTCCCTGTGCGACAATCCAGCTCTCCTGCGCAGGGATGAAACTCGTATGTTATTCAGCCCATGTGCCATAAATAGAGCGCGGAAGATTATTGAGTCCATGCCTGGCAGAAACTCTGGTGCATATACTAACAGTCAGGGAATCAGAAGTTTGCGCGAAGCAGTCGCAAGTGGAATCGCTGCAAGAGATGGTTTTCCATCAAGACCAGAAGACATCTTTCTGACAGATGGAGCGAGTTCAGCCATTAATTTGAGTATGCAGATACTCATTAGGTCCCAAGAAGATGGTGTTTTATGCCCTTTACCTGAATATCCGTTATACTCGGCGTCCATTATACTTCATGGTGGGACTATGGTACCATACAATCTTAGTGAGGACGGTGATTGGGGGCTTGAGATCTTCGAAGTAAAGAGGTGCTTGGAGGAGGCACGCATCGCAGGTTTGACTGTTCGGGCTATGGTGATCATAAACCCCGGAAATCCGACGGGACAGGTACTGTCTGTCACCAACCAGGAGGAGATAGTAGAATTTTGTCGGAAAGAAGGTTTGGTTATGCTTGCTGATGAGGTATACCAAGATAACGTCTATGTGGAAGATAGGAAATTCCATTCTTTCAAGAAAGTAGCCAGATCACTTGGGTATGACGAGAATGACATCTCCATAGTGTCATTTCACTCGGTCTCGATGGGGTTCTCTGGAGAATGTGGCAGAAGGGGAGGCTACATGGAGATATGTGGTTTTGGAGATGATGTTATGGGTGAGATTCGCAAAGTGGCTTCCGTGACTCTTTGCCCCAACATAGGTGGTCAAATTCTTACTAGCCTTGCTATGGATCCACCGAAGCTGGGAGATGGTTGTTTTGAGAATTTTATGGCTGAAAAGGAAGACATCCGTTTATCTCTCGCCAAGCGCGCCAAGACCTTGGCGGGCGCATTCAGCAGCCTGGAGGGAATGACCTGTAACAGAGTAGAAGGTGCGATCTACGCCTTCCCACGGATCCACCTCCCTGCAGCGGCGATCAAAGCCGCCAAGGCCGAGGGCATGTCTCCAGACTTGTTCTACGCGTGCCGCCTTCTCGACGCCACTGGGATTGCCGTCGTCCCTGGCTCTGGATTCCACCAGGTGTCTGGGCGAAACAAGGCCACCGGGACATGGCATATCCGGTGCACGATCCTCCCCGGCGAGGACAAGATCAAGGTAATGATCCCGCGCCTCAAGGAGTTCCACGAGTCCTTCATGAACGAGTTCCGTGACCGAAGCTGATGCGCATCTTCAGCTACACAAGCCACAGGCCGGTCAGAGCCCCGAAGGCGGTGTGATCTTCACTACCCTACCCTGTAAATTAAGCCTGTGTTGTACTGCCAATAAATAAACTTTCACTACCCTGTAAATTAAGCCTGTGTTGTACTACCAATAAATAAACTTTGGCAGCGGTGTGTTCGTCCTTCCCTG
CDS Sequence
- >TraesCS5D02G224200.1
ATGTCGTACAACAAGACGGCGTCCATCACCGCGGAGACCATAAACCCCAAGGTGAAGATCTTCGACTACGAGCCCTGCGGAGAGATCGCCAGGCACGCAGAGAGGTTGGAGCAGGAGATGGAGAAGAGCCCAGGTTCTCGCCCTTTTCCAGAGATAACATACTGCAACCTTGGGAACCCCCAGGCTCTCGGCCAGCGACCCATAACCTTCTTCCGTGAGGTTCTTTCCCTGTGCGACAATCCAGCTCTCCTGCGCAGGGATGAAACTCGTATGTTATTCAGCCCATGTGCCATAAATAGAGCGCGGAAGATTATTGAGTCCATGCCTGGCAGAAACTCTGGTGCATATACTAACAGTCAGGGAATCAGAAGTTTGCGCGAAGCAGTCGCAAGTGGAATCGCTGCAAGAGATGGTTTTCCATCAAGACCAGAAGACATCTTTCTGACAGATGGAGCGAGTTCAGCCATTAATTTGAGTATGCAGATACTCATTAGGTCCCAAGAAGATGGTGTTTTATGCCCTTTACCTGAATATCCGTTATACTCGGCGTCCATTATACTTCATGGTGGGACTATGGTACCATACAATCTTAGTGAGGACGGTGATTGGGGGCTTGAGATCTTCGAAGTAAAGAGGTGCTTGGAGGAGGCACGCATCGCAGGTTTGACTGTTCGGGCTATGGTGATCATAAACCCCGGAAATCCGACGGGACAGGTACTGTCTGTCACCAACCAGGAGGAGATAGTAGAATTTTGTCGGAAAGAAGGTTTGGTTATGCTTGCTGATGAGGTATACCAAGATAACGTCTATGTGGAAGATAGGAAATTCCATTCTTTCAAGAAAGTAGCCAGATCACTTGGGTATGACGAGAATGACATCTCCATAGTGTCATTTCACTCGGTCTCGATGGGGTTCTCTGGAGAATGTGGCAGAAGGGGAGGCTACATGGAGATATGTGGTTTTGGAGATGATGTTATGGGTGAGATTCGCAAAGTGGCTTCCGTGACTCTTTGCCCCAACATAGGTGGTCAAATTCTTACTAGCCTTGCTATGGATCCACCGAAGCTGGGAGATGGTTGTTTTGAGAATTTTATGGCTGAAAAGGAAGACATCCGTTTATCTCTCGCCAAGCGCGCCAAGACCTTGGCGGGCGCATTCAGCAGCCTGGAGGGAATGACCTGTAACAGAGTAGAAGGTGCGATCTACGCCTTCCCACGGATCCACCTCCCTGCAGCGGCGATCAAAGCCGCCAAGGCCGAGGGCATGTCTCCAGACTTGTTCTACGCGTGCCGCCTTCTCGACGCCACTGGGATTGCCGTCGTCCCTGGCTCTGGATTCCACCAGGTGTCTGGGCGAAACAAGGCCACCGGGACATGGCATATCCGGTGCACGATCCTCCCCGGCGAGGACAAGATCAAGGTAATGATCCCGCGCCTCAAGGAGTTCCACGAGTCCTTCATGAACGAGTTCCGTGACCGAAGCTGA
Protein Sequence
- >TraesCS5D02G224200.1
MSYNKTASITAETINPKVKIFDYEPCGEIARHAERLEQEMEKSPGSRPFPEITYCNLGNPQALGQRPITFFREVLSLCDNPALLRRDETRMLFSPCAINRARKIIESMPGRNSGAYTNSQGIRSLREAVASGIAARDGFPSRPEDIFLTDGASSAINLSMQILIRSQEDGVLCPLPEYPLYSASIILHGGTMVPYNLSEDGDWGLEIFEVKRCLEEARIAGLTVRAMVIINPGNPTGQVLSVTNQEEIVEFCRKEGLVMLADEVYQDNVYVEDRKFHSFKKVARSLGYDENDISIVSFHSVSMGFSGECGRRGGYMEICGFGDDVMGEIRKVASVTLCPNIGGQILTSLAMDPPKLGDGCFENFMAEKEDIRLSLAKRAKTLAGAFSSLEGMTCNRVEGAIYAFPRIHLPAAAIKAAKAEGMSPDLFYACRLLDATGIAVVPGSGFHQVSGRNKATGTWHIRCTILPGEDKIKVMIPRLKEFHESFMNEFRDRS