Information report for TaPpm1c
Gene Details
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Functional Descriptions
- Two transcription factors TaPpm1 and TaPpb1 co-regulate anthocyanin biosynthesis in purple pericarps of wheat.
- Three non-functional variants were detected in the coding sequence of TaPpm1 from non-purple seed lines, in which the function of TaPpm1 was destroyed either by insertion-induced frame shifts or truncated peptides.
- We were able to demonstrate that the interaction of TaPpm1 and TaPpb1 co-regulates the synthesis of anthocyanin.
- These results indicated that TaPpm1 and TaPpb1 are complementary genes that control downstream genes and subsequent purple pigment synthesis in wheat grains.
- TaPpm1 and TaPpb1 collaboratively regulate the purple pericarp phenotype of wheat.
Functional Keywords
Literature and News
Gene Resources
- NCBI ID: MG066453.1
- UniProt accessions: A0A2S1XUX1
- EMBL: MG066453
- AlphaFoldDB: A0A2S1XUX1
- GO: GO:0003677 , GO:0005634
- InterPro: IPR001005 , IPR009057 , IPR015495 , IPR017930
- PANTHER: PTHR47999 , PTHR47999:SF107
- SUPFAM: SSF46689
- PROSITE: PS50090 , PS51294
- Gene3D: 1.10.10.60
- CDD: cd00167
Sequences
cDNA Sequence
- >MG066453
GTGAAAAATTATCCTACGTAGTAGAATATGAAGCTAACGTGTGTATTTGTATGTGCCCTTATAATAAGGGTGTAGTTAGGTCTCAGTCGACTGAGATTTAACCAAGTCTTAGTCAAGTGACATAACATGCAAGAGAGAAAAAGAAAAAAACTATTTTTTTGCACGGATCTTAATGTATGATCTCACTGATATAACATCGACTAAGACTTAATGAAATCTCAGTCAACTGATTAAAAGACTGTTACAAGGGTGTAGTTAGGTCTCAGTCGACTGAGATTTAACCAAATCTCAGTCAAGTGACATAACATGCAAGAGAGAAAAAATAAACTGATTTTTTTTGCACATATCTTAACGTATGATCTCACGGATATAACATCGACCGAGACTTAACGAAATCTCAGTGAACTGAGACTTAAAAGACTGTTACAATAATATTGCAATGGAGGGAGTAATGTTCATGCCACTTGGACATAAAAGGCAACTATGAATAAGCCTCTGTTATAGAAATATGACATCGAATTTGGACGGATATCATCGCTCCTGCCAGCGATATATAACGGCGGCTGAACGGCCGTCCTGGTTACGTCCCTGTTCATGCACACATGGAAGCCTCTTCCCGGCCTTTTGGTCCATCTAACACTTTGAGGAAGCGGCATAAGCAGGCCACGTAAAGTGTTAGGTGCTAAGCCGGCCACGTAGTCCCGCTGCGGCGCCGGTGTATAAATACCCCAGCAACCCCCTGCTGCCCACAGGCCACTCCCCCTCTCTAACAAAGCACACACGGCGAGATAGAGATAGGGAGAGGGGTTGAGAGAGGGAGAGGGGATGGGGAGGAGGGCGTGCTGTGCCAAGGAAGGGGTGAAGCGAGGGGCCTGGACGAGCAAGGAGGACGAGATCCTGGCTTCCTACGTCAAGGCCCATGGCGAAGGCAGGTGGAGGGAGCTCCCGCAGCGAGCTGGTACTACTCGCGAGATGTTAGCAGGGGCGGAGCCAGAAAAATTGGCCAATGGGTTCACTGATTATCTCACTCTGAGAATTAGTTTGGTATGAATTAATTAAGTGTAAAGTTTAATTTTGAACTATATTAGAACAAGAGTCGTTTTGACAAATTCTTACAAAAAGAGTGTAACAAACAGAATATGATGTTGATTATCATATATAGATTAAATTTAGAGCTAAAGATTGCAAGACATACCAGTTGGATGAAATTATAAAATCACTTATTTTTAGAAAATAACTTCATAGCTTCATAGCTTCATGGTCAGCTTCTCATCTTGCTGAAAATATTGAGAAAAAATGACAAGTTAATTTGACAAATTCAAAGTAAGTACCATCAAGCGAAAGAAGCATGTAAAGCCACTCACATTTTAGTGTGTAGCTTTTCGATCTTTCATTATCATGCAAAGATCAAACACATCATATGGCAGTAATTTATCTGTTAATTGAAAACTTTGAGAGATTATTTGCAGTAGCGGCATTCGATGTACTGCTTAATTACATCTAACGGATGGCCTAGAAGTGCCAGCATCGTTATCAATTTCTTTTTGAGAAATATTATTGCATACCATAGTATGACCAATCAAAGTTCAGGGGAAAATAATCAGAAAACTAGGGTAAAAAGTAATACCACACAGCAGGGACGGAGTGATCTGATTACGTTCAGTTTGGACTTCAATTGCCAGCCACCGCCGACGGCCGACTTACTGTTCTTGGCTTGCCGCCGGAGGCTGCCGATCTGGCGCCGCGATGGGGGGAACATGGAGATGAAACACCGAGGGGCCGGGTTGGGAACCGAAATGGGGGGAAACGATAAGCGGCGGCGTGTTGCGTACATCATGGATGGTATGGAATCGTGCGGTCAACTGTCGAGCCTGCTGCGTGGATTGTATCGTATGGTATTGGGCTCTTTTGTTTCGAGAAATACCTGTAGGCTTTTTGTTGGGCTTTTCATCATGTTATAATAAATTTACAATGGGCTAAGAGGCTTCTTGCTCGTGCGTACTAGCAGCTTTGATGGGTTCAAGCGTGCATTTGTATTGGGTTCAAGCAAGTGAATGCGTATATACATGGACGTGACGAGCAAAGATCGTTGGGTTCAAGTGAACCCAACGCCTACACGCTGGCTTCGCCACTGGATGTTAGCTACCGATCCATCGTAAACCGTTCTGGTTCTATCCAATGGAGAGCTGGAATGGAAGTGACGCATGCTGCTAACTGAATGAATCTGCATGCAGGTCTGCGGCGGTGCGGCAAGAGCTGCCGGCTGCGGTGGCTGAACTACCTCCGGCCGAACATCAAGCGGGGCAACATCTCCGACGACGAGGAGGAGCTCATCGTCAGGCTCCACGGCCTGCTCGGCAACAGGTGGTCCATCATCGCCGGCAGGCTGCCCGGCCGAACAGACAACGAAATCAAGAACTACTGGAACAGCACGCTCGGCAGGAAGGCGCTCCCCGCCCGCCCCGCCATTGCCGCGGCGAGGACCGTCGCCTCCGGCTCCTCCAGCTCCACGGGGAGCGCCGCGGCGGCGCTGTCTACCTCCGTCCCTGCCGTCCTCCATGGCGCGGCGCCTTCGTCGCCGGCCGGCGCGGTGTGGGCGCCCAAGCCCGTGAGGTGCACGGGCGGCCTCTTCTTCCGCAGGGAGCAGGAGACGCCGCCGCCCGCGCCGGTCGTCGAGGAGACGCGGGCCGGAGGAGATCAAGAGGGAGACGCCTGCAGCGGCAGCAGCTCGGAGACGTCGTCGGCCGAGCCGTGCTCGTCGGGGTCGGGCGGCGGAGACTGGATGGACGACGTGAGAGCCCTGGCGTCGTTCCTGGAGTCCGACGAGGAATGGCTCAAGTCCCTGCACATGGCCGGTTAATTAACCTCTCACACGTGATCGATCTGGTTCAGTCACATGTACGTGGGTGCGCCGCTGCACGTACGCTTTTCGAAAAGGAAACTGTATGTATGCTTGAGCAGTGTGCATACGTACAAACGTACTTACGCCCGCGCGTATGTGGCGGTACGTGGCTGGCTAGCTCCCGTACGTTACGACTGTACTGAGTTTTTTATTTATAAACTACGACTGTACTGAGTTGTTCATATGTAAACGTGGTTTTGAGAAAATACGTAAGCTAGCGTCGCTCCTGGCATGTGCACGACAGCGCAACAGAAAAAGTCATGTGATGGATGGGCATCGGCGTCGGCGGAGCGTACTTTGCAGTAAACGACATACGCTAGTGAGATTTCCTCACTGTACTTGCTGCTTTCCGCGAGGTATCGTTTTCTGCAGCCACGGGCCACTGATCATAGTTGTTAGAAAGCTAGGGCTCGTGCAAGCATCTCAACCGTGGAAGAAGATGAATCGTGCTCCCCCTCTAGCCTTGTTTGGTTACATCCCTTCTCAAGGGGTAGAAGAGGATTGGAGAGGATCTCAATCCCTGCCAATTCCTTGTCAACTGAACAAGCGCTCAAATAGGCGCCCGGGCGTTGGCCCAACAGACTCCTACACCGATGCAACCTCCATAATCTAAGTGCTAACAATACTGATTTTTTTTCCTTGCAAAGGGTCATACAAACAGAAAATGAAGGAGGCGTCCGGCAACTCGGTTGGCATCGAAGCTTGCCGAAATCCCAGGATCAAACATGATTAAACCAAAACGGCCAGGAATCGGACCCTGGCGTCGGGCCAAAGCGCCCGTGTTCTAGATGCCCTTAGAGGGCTGGCTGGCGAGGGGACGACGAACCAGTATTTTTTTTTTTGAAGCTTTCACCGGGGAGGGTCCTTCCCGAATTTCATTTCAAATGATCAAGCATTAGTGTGAAGAAATATAGTTTCACTACAACCTGATACAGTTTGGCATGG
CDS Sequence
- >MG066453
ATGGGGAGGAGGGCGTGCTGTGCCAAGGAAGGGGTGAAGCGAGGGGCCTGGACGAGCAAGGAGGACGAGATCCTGGCTTCCTACGTCAAGGCCCATGGCGAAGGCAGGTGGAGGGAGCTCCCGCAGCGAGCTGGTACTACTCGCGAGATGTTAGCAGGGGCGGAGCCAGAAAAATTGGCCAATGGGTTCACTGATTATCTCACTCTGAGAATTAGTTTGGTCTGCGGCGGTGCGGCAAGAGCTGCCGGCTGCGGTGGCTGA
Protein Sequence
- >MG066453
MGRRACCAKEGVKRGAWTSKEDEILASYVKAHGEGRWRELPQRAGTTREMLAGAEPEKLANGFTDYLTLRISLVCGGAARAAGCGG