Information report for TaHMA3-5D
Gene Details
|
|
Functional Descriptions
- A locus on chromosome 5B carries a gene encoding a metal transporter (TaHMA3) with a non-functional variant causing high accumulation of cadmium in grain. The high-cadmium allele.
- One of these genes,TRITD5Bv1G197370, encodes a P1B-type heavy-metal ATPase 3 that is orthologous to rice HMA3.
Functional Keywords
- grain , atpase , transporter , cadmium , cadmium-accumulation , heavy-metal
Literature and News
Gene Resources
- NCBI ID: 123125538
- UniProt accessions: A0A059ZXY5
- EMBL: KF683298
- EnsemblPlants: TraesCS5D02G392700.1
- Gramene: TraesCS5D02G392700.1
- GO: GO:0005524 , GO:0016020 , GO:0016887
- OMA: SFDEWIY
- ExpressionAtlas: TraesCS5D02G392700
- InterPro: IPR001757 , IPR006121 , IPR008250 , IPR018303 , IPR023214
- PANTHER: PTHR48085 , PTHR48085:SF8
- SUPFAM: SSF55008 , SSF56784 , SSF81653 , SSF81665
- PROSITE: PS00154 , PS01229 , PS50846
- Gene3D: 2.70.150.10 , 3.30.70.100 , 3.40.1110.10 , 3.40.50.1000
- SMR: A0A059ZXY5
- CDD: cd02079
Sequences
cDNA Sequence
- >TraesCS5D02G392700.1
AGTGGCCGCCGTCGCTTTCACTGACGGCAGGGTTGCTTGCAGCTTGTAGCTCAACCTCTGCTCCTCCTCCAAACCATCGATCCCCGGCTCTGTCGTTGACTTATTTGCTATCTCCCATTTGGCTTTGTTTCTTGCTGTTCATCCGCCTGCGTCTCTGGATCACCGATGATGGGCGGCGGCGAGCCGTACACGGCGCTCGAGGAGAGCCTTCTGTCCGGGGAAGCGGCGGCGAGGAGGCAGTGGGAGAAGACGTACCTGGACGTGCTGGGCGTGTGCTGCTCGGCGGAGGTCGCGCTCGTCGAGCGGCTGCTGGCGCCGCTCGACGGCGTGAGGGCGGTGTCCGTCGTCGTCCCCTCCCGCACCGTCGTCGTCGAGCACGACCCCGCCGCCGTCTCTCAGTCCCGTATTGTCAAGGTCCTGAACGGGGCGGGCCTGGAGGCCTCGGTGCGAGCCTACGGCAGCAGCGGGGTCATCGGCCGATGGCCCAGCCCGTACATCGTCGCCTGCGGCGCCCTCCTCCTCGCGTCTTCCTTCAGGTGGCTCCTGCCTCCCCTGCAGTGGCTGGCCCTGGGGGCGGCCTGCGCCGGCGCTCCCCCGATGCTTCTCCGAGGGCTCGCCGCCGCCAGCAGGCTGACGCTGGACATCAACATCCTCATGCTTATCGCCGTTGCCGGTGCGGTTGCGCTCAAGGACTACGCGGAGGCAGGCGTCATCGTCTTCCTCTTCACCACTGCAGAGTGGCTCGAGACCCTGGCCTGCACCAAGGCCAGCGCCGGGATGTCGTCGTTGATGAGCATGATCCCGCCGAAGGCAGTCCTCGCGGAGACGGGCGAGGTCGTCAACGTGCGCGACATAGGTGTGGGCGCCGTCATCGCGGTCAGAGCCGGGGAGATGGTGCCGGTGGATGGCGTGGTGGTCGACGGGCAGAGTGAGGTCGATGAGAGGAGCCTCACCGGCGAGTCGTACCCGGTGCCCAAGCAACCGCAGTCCGAGGTCTGGGCCGGCACGCTCAACTTGGACGGCTACATCGCCGTGAGGACAATGGCCCTCGCCGAGAACTCCACGGTGGCCAAGATGGAGAGGCTGGTGGAGGAGGCCCAGCAGAGCAAGTCCAAGACGCAGCGGCTGATCGACTCCTGCGCCAGGTACTACACGCCGGCCGTGGTGGTTCTCGGAGCAGGGGTGGCGCTGCTGCCGCCGCTGCTGGGGGCGCGCGACGCGGAGCGGTGGTTCAGGCTGGCGCTGGTGCTGCTGGTGAGCGCGTGCCCGTGCGCGCTGGTGCTGTCGACGCCCGTCGCGACGTTCTGCGCGCTCCTGACGGCGGCGAGGATGGGGGTCCTCGTCAAGGGAGGGGACGTCCTCGAGTCGCTGGGCGAGATCAGGGCCGTGGCGTTCGACAAGACCGGCACCATCACCAGAGGGGAGTTCAGCGTCGACATGTTCGATGTGGTTGGGCACAAGGTTCAGATGAGCTATCTTCTTTACTGGATCTCAAGCATCGAGAGCAAATCCAGCCACCCAATGGCGGCTGCGCTCGTGGAGTACGCGCAGTCGAAATCCATCGAGCCGAAACCGGAATGCGTCGCCCAGTTCCGCATCCTTCCCGGCGAGGGCATCTATGGAGAGATCGACGGGAAACGCATCTACGTCGGGAACAAGAGGGTCTTGGCGAGGGGATCCTCCTGTCAGACAGTGCCAGAAAGAATGAATGGCCTGAAAGGCGTCTCGATCGGCTACGTGATCTGCGACGGGGACCTCGTCGGGGTGTTCTCGTTCTCCGACGACTGCCGGACCGGCGCGGCCGAAGCGATTCGAGAGCTGGCGTCCATGGGCATCAGCTCAGTACTGCTCACGGGGGACAGCGCGGAGGCGGCCGTGCACGCGCAGCAGCAGCTGGGCGGCGCCTTGGAGGAGCTCCACTCGGAGCTCTTCCCGGAGGACAAGGTCCGGCTGGTGGGCGCGCTGAAGGCGAGGGCTGGGCCGACGATGATGGTCGGCGACGGCATGAACGACGCCCCGGCACTGGCGACGGCGGACGTGGGCGTCTCCATGGGCATCTCCGGCTCGGCCGCGGCCATGGAGACCAGCCACGCGACGCTCATGTCCAGCGACATCCTCCGGGTCCCCGAGGCCGTCAGGCTCGGCAGGCGCGCCCGCCGGACCATCGCCGTCAACATGGTGTCCTCGATCGCCGCCAAGGCCGCCGTCCTCGCGCTCGCGGTCGCCTGGCGCCCGGTGCTGTGGGCGGCGGTCCTCGCCGACGTGGGGACGTGCCTGCTCGTCGTGCTCAACAGCATGCTGCTGCTGGGGGAGGGGCGCGGGCGCCGCGGGAAGGAGGAGGCGTGCCGCGCCACGGCCAGGTCGCTGGAGATGAGAAGGTCTCAGCTCGCCGCCGTTTCACCGGACGCTGCCGCTAAAAGCGTTGGAAAGACGGGCGGCGACGCATCGAAAGGCTGCCATTGCTGCCACAAGCCAAGCAAATCTCCTGAGCACTCGGTCGCCATCGACGTACGAGCCGGCGAGCAGCGTGAAAGCCCGACGGCCGCGACGTGTGCGCCGGCAAAAAAAGTCGAGGTCACCGGATCTGTCAACGGTCCCGCGGCGCCTGCTTCATCAAGCGGCGCGTCGGTAGGATGCTGCCCTCGTGAAACAGATAGCACGGAAGCGTGCAAGAAAATGGCTCCTGCTGATCTGGTGCTGAATATATGTACTACCTTTGGTTTATAAGTCCTCTTTGTATATTTTGTGCCGAATTTTAACTAGAGATTTAACTAACAAAATATCAATACATGCCATAAAAAATTATATCGTTGAATTCGTATTTAAACATAGTTTACGATTATATTATTTTTATGACATGCATTAACATTTTGTTAGTTAAGTTTAAGGACAAAATTTGGCGCAAAATACAAAGGAGACTAATAAACCAGGATGGAGGTAGTACGTGGCAACATGCGGTGAC
CDS Sequence
- >TraesCS5D02G392700.1
ATGATGGGCGGCGGCGAGCCGTACACGGCGCTCGAGGAGAGCCTTCTGTCCGGGGAAGCGGCGGCGAGGAGGCAGTGGGAGAAGACGTACCTGGACGTGCTGGGCGTGTGCTGCTCGGCGGAGGTCGCGCTCGTCGAGCGGCTGCTGGCGCCGCTCGACGGCGTGAGGGCGGTGTCCGTCGTCGTCCCCTCCCGCACCGTCGTCGTCGAGCACGACCCCGCCGCCGTCTCTCAGTCCCGTATTGTCAAGGTCCTGAACGGGGCGGGCCTGGAGGCCTCGGTGCGAGCCTACGGCAGCAGCGGGGTCATCGGCCGATGGCCCAGCCCGTACATCGTCGCCTGCGGCGCCCTCCTCCTCGCGTCTTCCTTCAGGTGGCTCCTGCCTCCCCTGCAGTGGCTGGCCCTGGGGGCGGCCTGCGCCGGCGCTCCCCCGATGCTTCTCCGAGGGCTCGCCGCCGCCAGCAGGCTGACGCTGGACATCAACATCCTCATGCTTATCGCCGTTGCCGGTGCGGTTGCGCTCAAGGACTACGCGGAGGCAGGCGTCATCGTCTTCCTCTTCACCACTGCAGAGTGGCTCGAGACCCTGGCCTGCACCAAGGCCAGCGCCGGGATGTCGTCGTTGATGAGCATGATCCCGCCGAAGGCAGTCCTCGCGGAGACGGGCGAGGTCGTCAACGTGCGCGACATAGGTGTGGGCGCCGTCATCGCGGTCAGAGCCGGGGAGATGGTGCCGGTGGATGGCGTGGTGGTCGACGGGCAGAGTGAGGTCGATGAGAGGAGCCTCACCGGCGAGTCGTACCCGGTGCCCAAGCAACCGCAGTCCGAGGTCTGGGCCGGCACGCTCAACTTGGACGGCTACATCGCCGTGAGGACAATGGCCCTCGCCGAGAACTCCACGGTGGCCAAGATGGAGAGGCTGGTGGAGGAGGCCCAGCAGAGCAAGTCCAAGACGCAGCGGCTGATCGACTCCTGCGCCAGGTACTACACGCCGGCCGTGGTGGTTCTCGGAGCAGGGGTGGCGCTGCTGCCGCCGCTGCTGGGGGCGCGCGACGCGGAGCGGTGGTTCAGGCTGGCGCTGGTGCTGCTGGTGAGCGCGTGCCCGTGCGCGCTGGTGCTGTCGACGCCCGTCGCGACGTTCTGCGCGCTCCTGACGGCGGCGAGGATGGGGGTCCTCGTCAAGGGAGGGGACGTCCTCGAGTCGCTGGGCGAGATCAGGGCCGTGGCGTTCGACAAGACCGGCACCATCACCAGAGGGGAGTTCAGCGTCGACATGTTCGATGTGGTTGGGCACAAGGTTCAGATGAGCTATCTTCTTTACTGGATCTCAAGCATCGAGAGCAAATCCAGCCACCCAATGGCGGCTGCGCTCGTGGAGTACGCGCAGTCGAAATCCATCGAGCCGAAACCGGAATGCGTCGCCCAGTTCCGCATCCTTCCCGGCGAGGGCATCTATGGAGAGATCGACGGGAAACGCATCTACGTCGGGAACAAGAGGGTCTTGGCGAGGGGATCCTCCTGTCAGACAGTGCCAGAAAGAATGAATGGCCTGAAAGGCGTCTCGATCGGCTACGTGATCTGCGACGGGGACCTCGTCGGGGTGTTCTCGTTCTCCGACGACTGCCGGACCGGCGCGGCCGAAGCGATTCGAGAGCTGGCGTCCATGGGCATCAGCTCAGTACTGCTCACGGGGGACAGCGCGGAGGCGGCCGTGCACGCGCAGCAGCAGCTGGGCGGCGCCTTGGAGGAGCTCCACTCGGAGCTCTTCCCGGAGGACAAGGTCCGGCTGGTGGGCGCGCTGAAGGCGAGGGCTGGGCCGACGATGATGGTCGGCGACGGCATGAACGACGCCCCGGCACTGGCGACGGCGGACGTGGGCGTCTCCATGGGCATCTCCGGCTCGGCCGCGGCCATGGAGACCAGCCACGCGACGCTCATGTCCAGCGACATCCTCCGGGTCCCCGAGGCCGTCAGGCTCGGCAGGCGCGCCCGCCGGACCATCGCCGTCAACATGGTGTCCTCGATCGCCGCCAAGGCCGCCGTCCTCGCGCTCGCGGTCGCCTGGCGCCCGGTGCTGTGGGCGGCGGTCCTCGCCGACGTGGGGACGTGCCTGCTCGTCGTGCTCAACAGCATGCTGCTGCTGGGGGAGGGGCGCGGGCGCCGCGGGAAGGAGGAGGCGTGCCGCGCCACGGCCAGGTCGCTGGAGATGAGAAGGTCTCAGCTCGCCGCCGTTTCACCGGACGCTGCCGCTAAAAGCGTTGGAAAGACGGGCGGCGACGCATCGAAAGGCTGCCATTGCTGCCACAAGCCAAGCAAATCTCCTGAGCACTCGGTCGCCATCGACGTACGAGCCGGCGAGCAGCGTGAAAGCCCGACGGCCGCGACGTGTGCGCCGGCAAAAAAAGTCGAGGTCACCGGATCTGTCAACGGTCCCGCGGCGCCTGCTTCATCAAGCGGCGCGTCGGTAGGATGCTGCCCTCGTGAAACAGATAGCACGGAAGCGTGCAAGAAAATGGCTCCTGCTGATCTGGTGCTGAATATATGTACTACCTTTGGTTTATAA
Protein Sequence
- >TraesCS5D02G392700.1
MMGGGEPYTALEESLLSGEAAARRQWEKTYLDVLGVCCSAEVALVERLLAPLDGVRAVSVVVPSRTVVVEHDPAAVSQSRIVKVLNGAGLEASVRAYGSSGVIGRWPSPYIVACGALLLASSFRWLLPPLQWLALGAACAGAPPMLLRGLAAASRLTLDINILMLIAVAGAVALKDYAEAGVIVFLFTTAEWLETLACTKASAGMSSLMSMIPPKAVLAETGEVVNVRDIGVGAVIAVRAGEMVPVDGVVVDGQSEVDERSLTGESYPVPKQPQSEVWAGTLNLDGYIAVRTMALAENSTVAKMERLVEEAQQSKSKTQRLIDSCARYYTPAVVVLGAGVALLPPLLGARDAERWFRLALVLLVSACPCALVLSTPVATFCALLTAARMGVLVKGGDVLESLGEIRAVAFDKTGTITRGEFSVDMFDVVGHKVQMSYLLYWISSIESKSSHPMAAALVEYAQSKSIEPKPECVAQFRILPGEGIYGEIDGKRIYVGNKRVLARGSSCQTVPERMNGLKGVSIGYVICDGDLVGVFSFSDDCRTGAAEAIRELASMGISSVLLTGDSAEAAVHAQQQLGGALEELHSELFPEDKVRLVGALKARAGPTMMVGDGMNDAPALATADVGVSMGISGSAAAMETSHATLMSSDILRVPEAVRLGRRARRTIAVNMVSSIAAKAAVLALAVAWRPVLWAAVLADVGTCLLVVLNSMLLLGEGRGRRGKEEACRATARSLEMRRSQLAAVSPDAAAKSVGKTGGDASKGCHCCHKPSKSPEHSVAIDVRAGEQRESPTAATCAPAKKVEVTGSVNGPAAPASSSGASVGCCPRETDSTEACKKMAPADLVLNICTTFGL