Information report for TaFMO1-5B
Gene Details
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Functional Descriptions
- Integration of genome-wide association study, linkage analysis, and population transcriptome analysis to reveal the TaFMO1-5B modulating seminal root growth in bread wheat.
- TaFMO1-5B modulating seminal root growth in bread wheat.
- The lines silenced for TaFMO1-5B consistently showed significantly larger seminal roots in different genetic backgrounds.
- Silencing TaFMO1-5B by VIGS promotes seminal root growth.
- Transcriptome-wide association study prioritized TaFMO1-5B, a gene encoding the flavin-containing monooxygenases, as the causal gene for QTrl.Rs-5B, whose expression levels correlate negatively with the phenotyping variations among our population.
- The lines silenced for TaFMO1-5B consistently showed significantly larger seminal roots in different genetic backgrounds.
Functional Keywords
- root , growth , root-growth
Literature and News
Gene Resources
- NCBI ID: 123116787
- UniProt accessions: A0A3B6LRV2
- EnsemblPlants: TraesCS5B02G350700.1
- Gramene: TraesCS5B02G350700.1
- GO: GO:0004499 , GO:0050660 , GO:0050661
- OMA: YMRRSAG
- InterPro: IPR000960 , IPR020946 , IPR036188 , IPR050346
- PANTHER: PTHR23023
- SUPFAM: SSF51905
- PROSITE: PS51257
- Gene3D: 3.50.50.60
- OrthoDB: A0A3B6LRV2
- SMR: A0A3B6LRV2
Sequences
cDNA Sequence
- >TraesCS5B02G350700.1
GGCGACCCCTCCCAAAAGATTAATATATCAGCAGCTGTGTCAGTGTGTCGATCCAAGAAACAGCTAAGCTGCCTACCGTCGACGATGGATCACAGGGCGAAGCGGGTGGCCATCGTCGGCGCCGGCACGAGCGGGCTGGCGGCGTGCAAGCTCCTGCTGGCGCGCGGGTTCCGGCCGGTGGTGTTCGACGCCGGGGAGTCCGTGGGCGGGCTGTGGACGCGCACGCTCGCCTCCACCAGGCTCCAGTCGCCCACCGCCGCCTACCGCTACTCGGACTTCCCCTGGCCGGACTCCGCGGGCGCGTTCCCGCGCCACGACCAGGTCGTCGACTACCTCGCCGCCTACGCGCGCCGCTTCGGCGTCGACGGCTGCGTCAGGTTCCGGAGCCGGGTCGTCGCCGCCGAGTACGTCGGTGCGGAGCCGGAGTGCGCGGCGGACCGGTGGGAGAGGTGGAACGGCAACGGCGAGGCCTTCGGCGACGGCTCGGGCGCGTGGCGCCTCACCGTGGGCCACCGCGGCGCCGGCGAGCAGGAGCCGGGGACGCAGGAGGTGCACGAGTTCGACTTCCTGATCCTCTGCATCGGCAGTTTCAGCGGCGTGCCCAACATCCCGGTGGTGTCCCCAGGCCCGGAGGCGTTCCGCGGGCGGGTGCTCCACTCCATGGAGCTCTCCGACATGGCCGACGCGGACGCCGCGGCACTGGTCAAGGGGAAGCGCGTCGTCGTCGTCGGCTCCAGCAAGTCGGCCTTCGAGATCGCCGCCGACTGCGCAGAGGCCAACGGTGCTGCGACGCCGTGCACAATGGTGTGCCGGAACCCCCAGTGGCTGCTGCACCGCGCGGAAGTGTGGGGCGGGGTCAGCATCGGGTACCTCTACATGAACCGCTTCGCCGAGCTGATGGTCCCCCGTCCCGGCGCCGGCGCCGCCTCCCGCCTCCTCGCCGCGCTGCTCGCGCCGCTCGCGTGGGCGATATCGGCGGCGACGGGGGCGTACTACCGGAGGGCGATCCCGATGCGGGAGCACGGCATGGAGCCCGGGCACGGGTTCGCGAGGGGCGTGTCGTCGTGCCTCCTCTCCATGCTCCCCGACGGGTTCTACGACAAGGTGAAGGAAGGCAGCGTCGTCTTCGCGAGGTCCAGGTCCTTCGTCTTCTGCCACGACGGCCTGGTGCTCCACGGCGCCGGCGCCGAGAAGCGCGTCGTGCCGGCCGACGTGGTGGTCCTGGCCACGGGCTTCCGCGGCGACGAGAAGCTGAGGGACATGTTCGCGTCGCCGCGGGTGAAGGACATCATCGCCGGGTCGCCGGACACGGCCGTGCCGCTGTACCGGGAGTGCGTGCACCCGCGGATCCCGCAGATGGCGGTGGTGGGGCACGCGGAGGGGCTGAACAACATCTACGCGAGCGAGATGACGGCCAAGTGGGTGGCGCGGCTGCTGGACGGCGCGTTCCGGGTGCCGGGCGTGCGGCGGATGGAGGAGAGCTGCGCGGAGTGGGGCAGGTACTACGCGCGTCGGAGCGGCGGCGGCGGGGAGGGGCAGCGCCCGTGGAGGCCGTGCCTCGGCGCGGTGAACGTGTGGTACAACGACGAGCTGTGCCGCGACATGGGGTGCGACCCGAGGAGGAAGAGGATGAAGGGGCAGGGGCTCCTCGCCGAGTGGTTCCAGCCCTACGGCGCCGTCGACTACGCCGACATCCAGTGACTACGCTTGGTTGAAATGCTACGGGCATTAGACAACTCGATCAATGTATCTTTTTATTTTTTGAGGGATCGATCAATGTAATTCAAATCGTCGCTCTAGTCAGTCATGTCGTTGTTGATCATGGATAAGAAGCCATCAAGGCCATAGTTTTGTCAGTAATGATACACGCTACAAACGAGTTACAGGATTTTACAAACAAGGTTAATTTGATTGGTTAATAGGTGAGGACGGTGGCCCACCATTCTGAAAATCAGGAGTTCAAGTTTGTGAATAGTATGAGATGAAAAGAG
CDS Sequence
- >TraesCS5B02G350700.1
ATGGATCACAGGGCGAAGCGGGTGGCCATCGTCGGCGCCGGCACGAGCGGGCTGGCGGCGTGCAAGCTCCTGCTGGCGCGCGGGTTCCGGCCGGTGGTGTTCGACGCCGGGGAGTCCGTGGGCGGGCTGTGGACGCGCACGCTCGCCTCCACCAGGCTCCAGTCGCCCACCGCCGCCTACCGCTACTCGGACTTCCCCTGGCCGGACTCCGCGGGCGCGTTCCCGCGCCACGACCAGGTCGTCGACTACCTCGCCGCCTACGCGCGCCGCTTCGGCGTCGACGGCTGCGTCAGGTTCCGGAGCCGGGTCGTCGCCGCCGAGTACGTCGGTGCGGAGCCGGAGTGCGCGGCGGACCGGTGGGAGAGGTGGAACGGCAACGGCGAGGCCTTCGGCGACGGCTCGGGCGCGTGGCGCCTCACCGTGGGCCACCGCGGCGCCGGCGAGCAGGAGCCGGGGACGCAGGAGGTGCACGAGTTCGACTTCCTGATCCTCTGCATCGGCAGTTTCAGCGGCGTGCCCAACATCCCGGTGGTGTCCCCAGGCCCGGAGGCGTTCCGCGGGCGGGTGCTCCACTCCATGGAGCTCTCCGACATGGCCGACGCGGACGCCGCGGCACTGGTCAAGGGGAAGCGCGTCGTCGTCGTCGGCTCCAGCAAGTCGGCCTTCGAGATCGCCGCCGACTGCGCAGAGGCCAACGGTGCTGCGACGCCGTGCACAATGGTGTGCCGGAACCCCCAGTGGCTGCTGCACCGCGCGGAAGTGTGGGGCGGGGTCAGCATCGGGTACCTCTACATGAACCGCTTCGCCGAGCTGATGGTCCCCCGTCCCGGCGCCGGCGCCGCCTCCCGCCTCCTCGCCGCGCTGCTCGCGCCGCTCGCGTGGGCGATATCGGCGGCGACGGGGGCGTACTACCGGAGGGCGATCCCGATGCGGGAGCACGGCATGGAGCCCGGGCACGGGTTCGCGAGGGGCGTGTCGTCGTGCCTCCTCTCCATGCTCCCCGACGGGTTCTACGACAAGGTGAAGGAAGGCAGCGTCGTCTTCGCGAGGTCCAGGTCCTTCGTCTTCTGCCACGACGGCCTGGTGCTCCACGGCGCCGGCGCCGAGAAGCGCGTCGTGCCGGCCGACGTGGTGGTCCTGGCCACGGGCTTCCGCGGCGACGAGAAGCTGAGGGACATGTTCGCGTCGCCGCGGGTGAAGGACATCATCGCCGGGTCGCCGGACACGGCCGTGCCGCTGTACCGGGAGTGCGTGCACCCGCGGATCCCGCAGATGGCGGTGGTGGGGCACGCGGAGGGGCTGAACAACATCTACGCGAGCGAGATGACGGCCAAGTGGGTGGCGCGGCTGCTGGACGGCGCGTTCCGGGTGCCGGGCGTGCGGCGGATGGAGGAGAGCTGCGCGGAGTGGGGCAGGTACTACGCGCGTCGGAGCGGCGGCGGCGGGGAGGGGCAGCGCCCGTGGAGGCCGTGCCTCGGCGCGGTGAACGTGTGGTACAACGACGAGCTGTGCCGCGACATGGGGTGCGACCCGAGGAGGAAGAGGATGAAGGGGCAGGGGCTCCTCGCCGAGTGGTTCCAGCCCTACGGCGCCGTCGACTACGCCGACATCCAGTGA
Protein Sequence
- >TraesCS5B02G350700.1.cds1
MDHRAKRVAIVGAGTSGLAACKLLLARGFRPVVFDAGESVGGLWTRTLASTRLQSPTAAYRYSDFPWPDSAGAFPRHDQVVDYLAAYARRFGVDGCVRFRSRVVAAEYVGAEPECAADRWERWNGNGEAFGDGSGAWRLTVGHRGAGEQEPGTQEVHEFDFLILCIGSFSGVPNIPVVSPGPEAFRGRVLHSMELSDMADADAAALVKGKRVVVVGSSKSAFEIAADCAEANGAATPCTMVCRNPQWLLHRAEVWGGVSIGYLYMNRFAELMVPRPGAGAASRLLAALLAPLAWAISAATGAYYRRAIPMREHGMEPGHGFARGVSSCLLSMLPDGFYDKVKEGSVVFARSRSFVFCHDGLVLHGAGAEKRVVPADVVVLATGFRGDEKLRDMFASPRVKDIIAGSPDTAVPLYRECVHPRIPQMAVVGHAEGLNNIYASEMTAKWVARLLDGAFRVPGVRRMEESCAEWGRYYARRSGGGGEGQRPWRPCLGAVNVWYNDELCRDMGCDPRRKRMKGQGLLAEWFQPYGAVDYADIQ