Gene Details:

Functional Descriptions:

  • Integration of genome-wide association study, linkage analysis, and population transcriptome analysis to reveal the TaFMO1-5B modulating seminal root growth in bread wheat.
  • TaFMO1-5B modulating seminal root growth in bread wheat.
  • The lines silenced for TaFMO1-5B consistently showed significantly larger seminal roots in different genetic backgrounds.
  • Silencing TaFMO1-5B by VIGS promotes seminal root growth.
  • Transcriptome-wide association study prioritized TaFMO1-5B, a gene encoding the flavin-containing monooxygenases, as the causal gene for QTrl.Rs-5B, whose expression levels correlate negatively with the phenotyping variations among our population.
  • The lines silenced for TaFMO1-5B consistently showed significantly larger seminal roots in different genetic backgrounds.

Literature:

Gene Resources:

Sequences:

cDNA Sequence
  • >TraesCS5B02G350700.1
    GGCGACCCCTCCCAAAAGATTAATATATCAGCAGCTGTGTCAGTGTGTCGATCCAAGAAACAGCTAAGCTGCCTACCGTCGACGATGGATCACAGGGCGAAGCGGGTGGCCATCGTCGGCGCCGGCACGAGCGGGCTGGCGGCGTGCAAGCTCCTGCTGGCGCGCGGGTTCCGGCCGGTGGTGTTCGACGCCGGGGAGTCCGTGGGCGGGCTGTGGACGCGCACGCTCGCCTCCACCAGGCTCCAGTCGCCCACCGCCGCCTACCGCTACTCGGACTTCCCCTGGCCGGACTCCGCGGGCGCGTTCCCGCGCCACGACCAGGTCGTCGACTACCTCGCCGCCTACGCGCGCCGCTTCGGCGTCGACGGCTGCGTCAGGTTCCGGAGCCGGGTCGTCGCCGCCGAGTACGTCGGTGCGGAGCCGGAGTGCGCGGCGGACCGGTGGGAGAGGTGGAACGGCAACGGCGAGGCCTTCGGCGACGGCTCGGGCGCGTGGCGCCTCACCGTGGGCCACCGCGGCGCCGGCGAGCAGGAGCCGGGGACGCAGGAGGTGCACGAGTTCGACTTCCTGATCCTCTGCATCGGCAGTTTCAGCGGCGTGCCCAACATCCCGGTGGTGTCCCCAGGCCCGGAGGCGTTCCGCGGGCGGGTGCTCCACTCCATGGAGCTCTCCGACATGGCCGACGCGGACGCCGCGGCACTGGTCAAGGGGAAGCGCGTCGTCGTCGTCGGCTCCAGCAAGTCGGCCTTCGAGATCGCCGCCGACTGCGCAGAGGCCAACGGTGCTGCGACGCCGTGCACAATGGTGTGCCGGAACCCCCAGTGGCTGCTGCACCGCGCGGAAGTGTGGGGCGGGGTCAGCATCGGGTACCTCTACATGAACCGCTTCGCCGAGCTGATGGTCCCCCGTCCCGGCGCCGGCGCCGCCTCCCGCCTCCTCGCCGCGCTGCTCGCGCCGCTCGCGTGGGCGATATCGGCGGCGACGGGGGCGTACTACCGGAGGGCGATCCCGATGCGGGAGCACGGCATGGAGCCCGGGCACGGGTTCGCGAGGGGCGTGTCGTCGTGCCTCCTCTCCATGCTCCCCGACGGGTTCTACGACAAGGTGAAGGAAGGCAGCGTCGTCTTCGCGAGGTCCAGGTCCTTCGTCTTCTGCCACGACGGCCTGGTGCTCCACGGCGCCGGCGCCGAGAAGCGCGTCGTGCCGGCCGACGTGGTGGTCCTGGCCACGGGCTTCCGCGGCGACGAGAAGCTGAGGGACATGTTCGCGTCGCCGCGGGTGAAGGACATCATCGCCGGGTCGCCGGACACGGCCGTGCCGCTGTACCGGGAGTGCGTGCACCCGCGGATCCCGCAGATGGCGGTGGTGGGGCACGCGGAGGGGCTGAACAACATCTACGCGAGCGAGATGACGGCCAAGTGGGTGGCGCGGCTGCTGGACGGCGCGTTCCGGGTGCCGGGCGTGCGGCGGATGGAGGAGAGCTGCGCGGAGTGGGGCAGGTACTACGCGCGTCGGAGCGGCGGCGGCGGGGAGGGGCAGCGCCCGTGGAGGCCGTGCCTCGGCGCGGTGAACGTGTGGTACAACGACGAGCTGTGCCGCGACATGGGGTGCGACCCGAGGAGGAAGAGGATGAAGGGGCAGGGGCTCCTCGCCGAGTGGTTCCAGCCCTACGGCGCCGTCGACTACGCCGACATCCAGTGACTACGCTTGGTTGAAATGCTACGGGCATTAGACAACTCGATCAATGTATCTTTTTATTTTTTGAGGGATCGATCAATGTAATTCAAATCGTCGCTCTAGTCAGTCATGTCGTTGTTGATCATGGATAAGAAGCCATCAAGGCCATAGTTTTGTCAGTAATGATACACGCTACAAACGAGTTACAGGATTTTACAAACAAGGTTAATTTGATTGGTTAATAGGTGAGGACGGTGGCCCACCATTCTGAAAATCAGGAGTTCAAGTTTGTGAATAGTATGAGATGAAAAGAG
CDS Sequence
  • >TraesCS5B02G350700.1
    ATGGATCACAGGGCGAAGCGGGTGGCCATCGTCGGCGCCGGCACGAGCGGGCTGGCGGCGTGCAAGCTCCTGCTGGCGCGCGGGTTCCGGCCGGTGGTGTTCGACGCCGGGGAGTCCGTGGGCGGGCTGTGGACGCGCACGCTCGCCTCCACCAGGCTCCAGTCGCCCACCGCCGCCTACCGCTACTCGGACTTCCCCTGGCCGGACTCCGCGGGCGCGTTCCCGCGCCACGACCAGGTCGTCGACTACCTCGCCGCCTACGCGCGCCGCTTCGGCGTCGACGGCTGCGTCAGGTTCCGGAGCCGGGTCGTCGCCGCCGAGTACGTCGGTGCGGAGCCGGAGTGCGCGGCGGACCGGTGGGAGAGGTGGAACGGCAACGGCGAGGCCTTCGGCGACGGCTCGGGCGCGTGGCGCCTCACCGTGGGCCACCGCGGCGCCGGCGAGCAGGAGCCGGGGACGCAGGAGGTGCACGAGTTCGACTTCCTGATCCTCTGCATCGGCAGTTTCAGCGGCGTGCCCAACATCCCGGTGGTGTCCCCAGGCCCGGAGGCGTTCCGCGGGCGGGTGCTCCACTCCATGGAGCTCTCCGACATGGCCGACGCGGACGCCGCGGCACTGGTCAAGGGGAAGCGCGTCGTCGTCGTCGGCTCCAGCAAGTCGGCCTTCGAGATCGCCGCCGACTGCGCAGAGGCCAACGGTGCTGCGACGCCGTGCACAATGGTGTGCCGGAACCCCCAGTGGCTGCTGCACCGCGCGGAAGTGTGGGGCGGGGTCAGCATCGGGTACCTCTACATGAACCGCTTCGCCGAGCTGATGGTCCCCCGTCCCGGCGCCGGCGCCGCCTCCCGCCTCCTCGCCGCGCTGCTCGCGCCGCTCGCGTGGGCGATATCGGCGGCGACGGGGGCGTACTACCGGAGGGCGATCCCGATGCGGGAGCACGGCATGGAGCCCGGGCACGGGTTCGCGAGGGGCGTGTCGTCGTGCCTCCTCTCCATGCTCCCCGACGGGTTCTACGACAAGGTGAAGGAAGGCAGCGTCGTCTTCGCGAGGTCCAGGTCCTTCGTCTTCTGCCACGACGGCCTGGTGCTCCACGGCGCCGGCGCCGAGAAGCGCGTCGTGCCGGCCGACGTGGTGGTCCTGGCCACGGGCTTCCGCGGCGACGAGAAGCTGAGGGACATGTTCGCGTCGCCGCGGGTGAAGGACATCATCGCCGGGTCGCCGGACACGGCCGTGCCGCTGTACCGGGAGTGCGTGCACCCGCGGATCCCGCAGATGGCGGTGGTGGGGCACGCGGAGGGGCTGAACAACATCTACGCGAGCGAGATGACGGCCAAGTGGGTGGCGCGGCTGCTGGACGGCGCGTTCCGGGTGCCGGGCGTGCGGCGGATGGAGGAGAGCTGCGCGGAGTGGGGCAGGTACTACGCGCGTCGGAGCGGCGGCGGCGGGGAGGGGCAGCGCCCGTGGAGGCCGTGCCTCGGCGCGGTGAACGTGTGGTACAACGACGAGCTGTGCCGCGACATGGGGTGCGACCCGAGGAGGAAGAGGATGAAGGGGCAGGGGCTCCTCGCCGAGTGGTTCCAGCCCTACGGCGCCGTCGACTACGCCGACATCCAGTGA
Protein Sequence
  • >TraesCS5B02G350700.1.cds1
    MDHRAKRVAIVGAGTSGLAACKLLLARGFRPVVFDAGESVGGLWTRTLASTRLQSPTAAYRYSDFPWPDSAGAFPRHDQVVDYLAAYARRFGVDGCVRFRSRVVAAEYVGAEPECAADRWERWNGNGEAFGDGSGAWRLTVGHRGAGEQEPGTQEVHEFDFLILCIGSFSGVPNIPVVSPGPEAFRGRVLHSMELSDMADADAAALVKGKRVVVVGSSKSAFEIAADCAEANGAATPCTMVCRNPQWLLHRAEVWGGVSIGYLYMNRFAELMVPRPGAGAASRLLAALLAPLAWAISAATGAYYRRAIPMREHGMEPGHGFARGVSSCLLSMLPDGFYDKVKEGSVVFARSRSFVFCHDGLVLHGAGAEKRVVPADVVVLATGFRGDEKLRDMFASPRVKDIIAGSPDTAVPLYRECVHPRIPQMAVVGHAEGLNNIYASEMTAKWVARLLDGAFRVPGVRRMEESCAEWGRYYARRSGGGGEGQRPWRPCLGAVNVWYNDELCRDMGCDPRRKRMKGQGLLAEWFQPYGAVDYADIQ