Information report for TaDEP1-5B
Gene Details
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Functional Descriptions
- In the case of TaDEP1, the aabbdd mutant plants with frameshift mutations in all six alleles exhibited an extremely dwarf phenotype (with a mean plant height of 36.7cm) compared with their WT counterparts.
- These results demonstrate for the first time that TaDEP1 is an important regulator of wheat growth and development.
- TaDEP1, the aabbdd mutant plants with frameshift mutations in all six alleles exhibited an extremely dwarf phenotype (with a mean plant height of 36.7 cm) compared with their WT counterparts.
- TaARF12 and TaDEP1 function in epistasis with the classical plant height Rht-1 locus, leading to propose a “Green Revolution”-based working model for historical wheat breeding.
Functional Keywords
- growth , development , plant-development , plant-growth , dwarf , height , plant-height
Literature and News
- Efficient and transgene-free genome editing in wheat through transient expression of CRISPR/Cas9 DNA or RNA. DOI: 10.1038/ncomms12617 ; PMID: 27558837
- Wheat breeding history reveals synergistic selection of pleiotropic genomic sites for plant architecture and grain yield. DOI: 10.1016/j.molp.2022.01.004 ; PMID: 35026438
Gene Resources
- NCBI ID: 100270660
- UniProt accessions: A0A385HBV3
- EnsemblPlants: TraesCS5B02G208700.1
- Gramene: TraesCS5B02G208700.1
- OMA: CKKCCCF
- InterPro: IPR055305
- PANTHER: PTHR32378 , PTHR32378:SF10
- OrthoDB: A0A385HBV3
Sequences
cDNA Sequence
- >TraesCS5B02G208700.1
CCCTTTGCTATTATTGCCCGCGCAGCGCGAGCTATATGGAGAGACTCCTCGCCTCCGCCTTCATTTCACTTCCACCACCTGCTCTACTCTGCTCTGCTCCTCCCCAGCCCACGCCCCCGCCTCCATCTCCTCGCGTCGCACGCACGCACGCACGCACTCACCTGCGCTGCTCAGATTCCTTATTACATCACCGCCGGCCAGTGCGCAACCACTGCTCCACCGCGCCTCCTGCTGCTAGCTGCCGCCCCGCCGCCGGCGCCTAATGCGGGCCGGTGGCTAAGCCTAAGCCCTCCAGTTCCGGGCGTGTAAGAGACAAAGAGACATGGGGGAGGGCGCGGTGGTGGTGCTGGAGGCGCCCAAGCCCAGGTCGCCGCCGAGGTACCCGGACATGTGCGGTCGCCGGCGCCTGCAGCTGGAGGTGCAGATCCTTGACCGCGAGCTCACGTTCCTCAAGGACGAGCTACATTTACTTGAAGGGGCTCAACCAGTCTCACGTTCTGGTTGCTTGAAAGAGGTAAACGAGTTTGTTGGTACAAAACAAGACCCGCTAATACCAATTAACAAAAGGAAGCACCGGTCCTGCCGTCTTTATTGGTGGATCAGATCGAAACTGTGCATATGTGCTTCATGGCTGTGCTGCTCCTGCCAATGCCTACCAACCTGCAAAAGACCAAGGTGCTTCGACTGTTCATGCTGCGAGCCAAACTGCTCGTGCTGCAGCCTGAACTGCTGCAGCTGCTTCAGTATCCCTTCGTGCTGCAAACCAAGCTGTGGCTGCTTTGAGTGCTGCAGCTGCAGCAAACCACAGTGCTGCAGCAGCGGCTGTAACCCTTGCGGCGAGTGCAAGCCGGAGTGCGGCTCGTGTTCCGGCGGCGGCTGCTGCGGCGAGCAGTGCTGCTCCTGCCCTCGATGCACAGGCTGCTTCAGCTGCTTCAAGGTCCCCAAATGCTCGTGCGCGCAGTGCTTCAACTGCCAGTCGTCGTGCTGCAAGGGGCAGCCGTCGTGCTTCAGGTGCCAGTCGTCGTGCTGCGACAAGGGAGGCTGCTGCAGCGGCGGGTCGTGCCTGAGCTGCCCGAAGCCGTCGTGCCCGGAGTGCTCCTGCGGGTGCGTGTGGTCGTGCAAAAACTGTACAGACGGATGCCGATGCGCCCGGTGCTGTGCTGGCGGGTGCCTGTGTTAAGTTAGGCCACATGGTGTCAAGCCTTTCTCTCTTTTGGTAGTAGTTGTCTTTGTGCTTGCTGTTTAAGCCTCTGTTTGGGTTCGTTCGGGGCCTTGACGTATGGTGGTGTTTCACATGTAAAGAAATAACTTGACCTCCGGATCACAAGGCGGAGTGAAGTAGCTCTAGTATCAGTAGCCAAGTTATATATATTGGTGATGCACATTGTCAACCATTTTACAGGGATTTTCTTTTTCTTTTTT
CDS Sequence
- >TraesCS5B02G208700.1
ATGGGGGAGGGCGCGGTGGTGGTGCTGGAGGCGCCCAAGCCCAGGTCGCCGCCGAGGTACCCGGACATGTGCGGTCGCCGGCGCCTGCAGCTGGAGGTGCAGATCCTTGACCGCGAGCTCACGTTCCTCAAGGACGAGCTACATTTACTTGAAGGGGCTCAACCAGTCTCACGTTCTGGTTGCTTGAAAGAGGTAAACGAGTTTGTTGGTACAAAACAAGACCCGCTAATACCAATTAACAAAAGGAAGCACCGGTCCTGCCGTCTTTATTGGTGGATCAGATCGAAACTGTGCATATGTGCTTCATGGCTGTGCTGCTCCTGCCAATGCCTACCAACCTGCAAAAGACCAAGGTGCTTCGACTGTTCATGCTGCGAGCCAAACTGCTCGTGCTGCAGCCTGAACTGCTGCAGCTGCTTCAGTATCCCTTCGTGCTGCAAACCAAGCTGTGGCTGCTTTGAGTGCTGCAGCTGCAGCAAACCACAGTGCTGCAGCAGCGGCTGTAACCCTTGCGGCGAGTGCAAGCCGGAGTGCGGCTCGTGTTCCGGCGGCGGCTGCTGCGGCGAGCAGTGCTGCTCCTGCCCTCGATGCACAGGCTGCTTCAGCTGCTTCAAGGTCCCCAAATGCTCGTGCGCGCAGTGCTTCAACTGCCAGTCGTCGTGCTGCAAGGGGCAGCCGTCGTGCTTCAGGTGCCAGTCGTCGTGCTGCGACAAGGGAGGCTGCTGCAGCGGCGGGTCGTGCCTGAGCTGCCCGAAGCCGTCGTGCCCGGAGTGCTCCTGCGGGTGCGTGTGGTCGTGCAAAAACTGTACAGACGGATGCCGATGCGCCCGGTGCTGTGCTGGCGGGTGCCTGTGTTAA
Protein Sequence
- >TraesCS5B02G208700.1
MGEGAVVVLEAPKPRSPPRYPDMCGRRRLQLEVQILDRELTFLKDELHLLEGAQPVSRSGCLKEVNEFVGTKQDPLIPINKRKHRSCRLYWWIRSKLCICASWLCCSCQCLPTCKRPRCFDCSCCEPNCSCCSLNCCSCFSIPSCCKPSCGCFECCSCSKPQCCSSGCNPCGECKPECGSCSGGGCCGEQCCSCPRCTGCFSCFKVPKCSCAQCFNCQSSCCKGQPSCFRCQSSCCDKGGCCSGGSCLSCPKPSCPECSCGCVWSCKNCTDGCRCARCCAGGCLC