Gene Details:

  • Gene ID:
  • Gene Symbol: TaCKX6-D1
  • Gene Name: cytokinin oxidase
  • Genome: Chinese_Spring1.0
  • Species: Triticum aestivum

Functional Descriptions:

  • TaCKX6-D1, the ortholog of rice OsCKX2, is associated with grain weight in hexaploid wheat.
  • TaCKX6-D1, a wheat ortholog of rice OsCKX2, was cloned and its haplotype variants were determined to be significantly associated with the 1000-grain weight on the basis of linkage mapping, association analysis and gene expression analysis.
  • Sequence variations among modern cultivars, landraces and wild species suggest a significant domestication signature at the TaCKX6-D1 locus in Chinese wheat germplasm.
  • TaCKX6-D1 may serve as a useful gene for the breeding of high-yielding wheat.
  • An upstream gene or cis factor may affect the function of TaCKX6-D1, and the diversity of the regulator gene or cis element and the 18-bp indel are in linkage disequilibrium, just like tb1 in maize.

Literature:

Gene Resources:

Orthologs:

Sequences:

cDNA Sequence
  • >JQ797673
    ATGGCTGCTCTCTTCGTGCTCGGCTGCTTCCTGCGGACCGTCCAGACCGCACGGGCTGACGCCGACGCGCTCGCGTGGACGCCGGCCTCCCCTTTCCGCGACGAGCTCCGCGACCTCGGCGTCGCCGCGCTGATCCGCGACGACGCCGAGGCCACCGCGCTCGCGTCCACTGACTTCGGCAACGTGACGGTCGCGCCGGCGGCGGCCGTGCTCTATCCGTCGTGCCCCGCAGACATTGCCGCGCTGCTGCGCGCCTCGTGCGCGCGCTCGTCCCCGTTCCCGGTGTCCGCCCGGGGACGCGGCCACTCCGTACGTGGCCAGGCGGCCGCGACCGACGGCGTCGTCGTCGACATGCCGTCGCTCGGACGCCTCGGCGGAGGCTCCACTGCGTCCCGCCTCTCCGTGTCGGTTGAAGGCCAGTACATAGACGCCGGCGGCGAACAGCTCTGGGTGGACGTGCTGCACGCCGCCCTCGCGCACGGCCTAACGCCGCGTTCGTGGACCGACTACCTCCACCTCACCGTCGGCGGCACGCTCTCCAACGCCGGCATCAGCGGCCAGGCCTTCCGCTACGGCCCCCAGATTTCCAACGTCCAAGAACTGGACGTCATCACCGGTGAGTACGCTGCGTACATGCACGCTTCATACTTCATTGATGACAGCACGTTCACTTACGTTCTTGACTACTTGTAAATATGTAGGGCTCGGAGAGATGGTGACGTGTTCGAAGGGGAGGAACTCCGACCTATTCGACGCCGTGCTGGGCGGGCTTGGGCAGTTCGGCGTCATAACGCGAGCGCGCATACCGCTCGTGCCCGCGCCGACGAGGGCGCGCTGGGTGCGCCTCCTGTACACGGGCGCCGCCTCACTCACCGGCGACCAGGAGCAGCTCATAGACGTCGAGCGTGCCAACGCGCTGTCCGGGCTCATGGACTACGTCGAGGGCACGGTCCTCGCGGACAAGGGCCTGATCGGGAGCTGGCGCTCGCCGTCGCCGTCGTCATCGTCCTTCTGCTCGGAGCCCGACGCCGCAGCGCGCGTCGCCAAGCTCGCCGAGGAGGCAGGCGGCGTCCTCTACTGCCTTGAGGGAGCGCTATACTACGGCGGAACGGCCGGCGGCGAGCCTGACGTCGAAAAGGTAATAAACGACCACCTTTGTCGGTGCGGGTGCCCGTCGTGTAGCGCTGGTAAAGGTAAACTACATGGGACCCATCGAGTCATGGGATCGTGACTTTTGGCCTCCTATGACGTGGATGCATGCGTGCATGGCTCAAGCTTGCATGCAGATCCGTGCACCACCAACGTCGTAGTACGTACTTGGCCTAGCCTCTGCCTGCCCTTGGAAATGCGCATCTCACTGCCTTTTCCGTCGGGAAAATATTTTTTTGTTGCTTTCTCACTGTTTTCCAAACTTCATAAAAAACACAGGTAAAAATTGCAGTACAGCACGTGTGGCATTTTAAAAAACGTGTGCAGGCTATTTATATAGAGAGATGACGGGAGCTAAAATAAAACAATGCCAATCTATGATTAGATTTCTGGTAACAAATTTATTAGGAATCCGCTAAGTTCCACATCATCGAAACTGCTTTTTTTGTTGAGGATCAATGCCGCTGCTTTATTTCACCTTAACCGAAACTAGGAATGTCGTCCGAAAGAAACTCCAGAATGTGCTCTGGGGTACAGAAAACCAAACTTTACAAAGACGCTCACCTAAACCTAACTTAGCTAGCTTATCAGCGGCTCTATTGGCATCACGACCATTCCACGCCACTTTAACTTCCAAGAAAGGAAGGAGCAAGTTTTAAAATTCCTGGACATGAGGGCCGAATCATCGAGACTGCTAAGGTGGTACAAATCATATGTGCAGAAACTTTTCTTTTAGTTACCTATAAAAAACTTTTCTTTTAGCCGAAAACAATAAAGCAGCATGCACACAATTTCCCATTCTAAATTTATAATTGCGCAATGGTAAATGCACACTCGTTTTGGCATTGAGTTGATCCAAAGGCTCACCAGAATGACCAGTGTGAGTTGTGAGTTTATATTATGAGATCCATAAGCCTCTCACAACAGTAGAAAATATACCTTTGCCAGAATTATATAAGTGCATCCATGTCGACATATAAGCTTTTCAGCATCGATCAACAGTATTTCCATGGAGTGTTATATCTGTTAGCCAGTCACCTAGTAGGCTAGCGCACGAACAAGCTAGATCCGATGTATGGGATGGGACAGGGACCTTACATGCAGATGCCTGGCCTACATGCTCTACCACTTCCATGCATATACACGACACACTGTGCCCGCCACCAATTGCTCAAAAAGTAAAACTCGCTCGTTCACCTTATAATAATTTGTACGGTATTTGTCCTGGTCTCTTGCGGAGTAGATGGCTGGAAAGGTCAGCATAATGGTGGCACGTCCATATTTTTCATAACAGTTTTGTTAAGTCACTGTCGACTGATACTTTGTTATGTCTCAGTCCATGCTATCTTCCAAACATACATGGAAATTCGTACGAAAATTCTATTTTTGGCCTTTTCTTTTTTCTTCTTGTATACTAGTATATCACTTGACCTACACCCGGAGGCAGATTTATGGTCTATGGGGACATCTACACCCTATATGAAAAAAAAACATTTAGTAATTCAACAAAAAGTCAGAAATTCCTGAAAATATTTTTGAAATAAACTTGACCTTTTATTGTACTCGTGAGAAAAAATTCACAAAAAGAAAATCTCCCTTTGACTTCTTTTCAAAAAAACACAATTTTTGGCTAAAATAGTGAGAGTAGTGACCTATAATAGCAAATAAATTTTGTGTTTTTTGCTGTGAAGTCAACTTTGTTTTTTTCATGAAAATTTATATACTTGTGCAAAAGTAAGTCAAGTTTTTTGTCAAAATAGTTCTTACCTATTTTGACCTTTTATTAAAATATTAAAAAAATCTCCATATAGGGAGCATATATAACCAAGAACCAAAGTGTATTTTCCCTAGACACACCCTTTTCATAATGTAGTACTACTACTTTGACACGTCGATAGTCTCATGCATATGCATATGCATGCATGCATGCGTAAAACTGTTCACCGTGAAAAGTTAATTTTTTTTAGGGAAACAGTGTGAAAAGTTATTGACTGGTGCATGCATATACATGCAGAGGCTGGAGACGCTACTGCGTGAGCTGCGGTACGAGCGGGGCTTCGCGTCCGTGCATGACGTGTCTTACGTGGAGTTCCTGGACCGCGTGCGCGACGGCGAGCTCAAGCTCCGCGCCGCCGGTCAATGGGACGTGCCGCACCCCTGGCTCATTCTCTTCCTCCCGCGCTCCCGCGTCCTGGACTTCGCCGCCGGCGTCTTCCATGGCATCCTCCGCCGCGGCGTCACCGGCGCCAAGGGACCCATCCTCGTCTACCCCATGAACCGGAACAGGTGGGACAGCGACTTGTCGGCGGTGTTCCCGGAGGAGGAAGAGATGTTCTACACGGTGGGAATCCTCCGGCCGGCCGTGTCCGACGGCGACCTTGGGCGCCTGGAGGAGCAGAACGACGAGATCTTACGGTTCTGCGAGGAGGCCAGGATACGGTGCGTGGAGTACCTGTCGTACTACCCCGACCAGGCCGGGTGGGAGAAGAAGCACTTTGGTCCGGCCAAGTGGGCCAGGTTCGTGGAGCGGAAGAGGAAGTATGATCCCAAGGCGATCCTGTCCCGTGGCCAGAGAATTTTCGCATCCTCGCTGGCTTGA
CDS Sequence
  • >JQ797673
    ATGGCTGCTCTCTTCGTGCTCGGCTGCTTCCTGCGGACCGTCCAGACCGCACGGGCTGACGCCGACGCGCTCGCGTGGACGCCGGCCTCCCCTTTCCGCGACGAGCTCCGCGACCTCGGCGTCGCCGCGCTGATCCGCGACGACGCCGAGGCCACCGCGCTCGCGTCCACTGACTTCGGCAACGTGACGGTCGCGCCGGCGGCGGCCGTGCTCTATCCGTCGTGCCCCGCAGACATTGCCGCGCTGCTGCGCGCCTCGTGCGCGCGCTCGTCCCCGTTCCCGGTGTCCGCCCGGGGACGCGGCCACTCCGTACGTGGCCAGGCGGCCGCGACCGACGGCGTCGTCGTCGACATGCCGTCGCTCGGACGCCTCGGCGGAGGCTCCACTGCGTCCCGCCTCTCCGTGTCGGTTGAAGGCCAGTACATAGACGCCGGCGGCGAACAGCTCTGGGTGGACGTGCTGCACGCCGCCCTCGCGCACGGCCTAACGCCGCGTTCGTGGACCGACTACCTCCACCTCACCGTCGGCGGCACGCTCTCCAACGCCGGCATCAGCGGCCAGGCCTTCCGCTACGGCCCCCAGATTTCCAACGTCCAAGAACTGGACGTCATCACCGGGCTCGGAGAGATGGTGACGTGTTCGAAGGGGAGGAACTCCGACCTATTCGACGCCGTGCTGGGCGGGCTTGGGCAGTTCGGCGTCATAACGCGAGCGCGCATACCGCTCGTGCCCGCGCCGACGAGGGCGCGCTGGGTGCGCCTCCTGTACACGGGCGCCGCCTCACTCACCGGCGACCAGGAGCAGCTCATAGACGTCGAGCGTGCCAACGCGCTGTCCGGGCTCATGGACTACGTCGAGGGCACGGTCCTCGCGGACAAGGGCCTGATCGGGAGCTGGCGCTCGCCGTCGCCGTCGTCATCGTCCTTCTGCTCGGAGCCCGACGCCGCAGCGCGCGTCGCCAAGCTCGCCGAGGAGGCAGGCGGCGTCCTCTACTGCCTTGAGGGAGCGCTATACTACGGCGGAACGGCCGGCGGCGAGCCTGACGTCGAAAAGAGGCTGGAGACGCTACTGCGTGAGCTGCGGTACGAGCGGGGCTTCGCGTCCGTGCATGACGTGTCTTACGTGGAGTTCCTGGACCGCGTGCGCGACGGCGAGCTCAAGCTCCGCGCCGCCGGTCAATGGGACGTGCCGCACCCCTGGCTCATTCTCTTCCTCCCGCGCTCCCGCGTCCTGGACTTCGCCGCCGGCGTCTTCCATGGCATCCTCCGCCGCGGCGTCACCGGCGCCAAGGGACCCATCCTCGTCTACCCCATGAACCGGAACAGGTGGGACAGCGACTTGTCGGCGGTGTTCCCGGAGGAGGAAGAGATGTTCTACACGGTGGGAATCCTCCGGCCGGCCGTGTCCGACGGCGACCTTGGGCGCCTGGAGGAGCAGAACGACGAGATCTTACGGTTCTGCGAGGAGGCCAGGATACGGTGCGTGGAGTACCTGTCGTACTACCCCGACCAGGCCGGGTGGGAGAAGAAGCACTTTGGTCCGGCCAAGTGGGCCAGGTTCGTGGAGCGGAAGAGGAAGTATGATCCCAAGGCGATCCTGTCCCGTGGCCAGAGAATTTTCGCATCCTCGCTGGCTTGA
Protein Sequence
  • >JQ797673
    MAALFVLGCFLRTVQTARADADALAWTPASPFRDELRDLGVAALIRDDAEATALASTDFGNVTVAPAAAVLYPSCPADIAALLRASCARSSPFPVSARGRGHSVRGQAAATDGVVVDMPSLGRLGGGSTASRLSVSVEGQYIDAGGEQLWVDVLHAALAHGLTPRSWTDYLHLTVGGTLSNAGISGQAFRYGPQISNVQELDVITGLGEMVTCSKGRNSDLFDAVLGGLGQFGVITRARIPLVPAPTRARWVRLLYTGAASLTGDQEQLIDVERANALSGLMDYVEGTVLADKGLIGSWRSPSPSSSSFCSEPDAAARVAKLAEEAGGVLYCLEGALYYGGTAGGEPDVEKRLETLLRELRYERGFASVHDVSYVEFLDRVRDGELKLRAAGQWDVPHPWLILFLPRSRVLDFAAGVFHGILRRGVTGAKGPILVYPMNRNRWDSDLSAVFPEEEEMFYTVGILRPAVSDGDLGRLEEQNDEILRFCEEARIRCVEYLSYYPDQAGWEKKHFGPAKWARFVERKRKYDPKAILSRGQRIFASSLA