Gene Details:
- Gene ID:
- Gene Symbol: TaCKX6-D1
- Gene Name: cytokinin oxidase
- Genome: Chinese_Spring1.0
- Species: Triticum aestivum
Functional Descriptions:
- TaCKX6-D1, the ortholog of rice OsCKX2, is associated with grain weight in hexaploid wheat.
- TaCKX6-D1, a wheat ortholog of rice OsCKX2, was cloned and its haplotype variants were determined to be significantly associated with the 1000-grain weight on the basis of linkage mapping, association analysis and gene expression analysis.
- Sequence variations among modern cultivars, landraces and wild species suggest a significant domestication signature at the TaCKX6-D1 locus in Chinese wheat germplasm.
- TaCKX6-D1 may serve as a useful gene for the breeding of high-yielding wheat.
- An upstream gene or cis factor may affect the function of TaCKX6-D1, and the diversity of the regulator gene or cis element and the 18-bp indel are in linkage disequilibrium, just like tb1 in maize.
Function-related keywords:
Literature:
- TaCKX6-D1, the ortholog of rice OsCKX2, is associated with grain weight in hexaploid wheat. DOI: 10.1111/j.1469-8137.2012.04194.x ; PMID: 22670578
Related News:
Gene Resources:
- NCBI ID: JQ797673.1
- UniProt accessions: I4AZT3
Orthologs:
Sequences:
cDNA Sequence
- >JQ797673
ATGGCTGCTCTCTTCGTGCTCGGCTGCTTCCTGCGGACCGTCCAGACCGCACGGGCTGACGCCGACGCGCTCGCGTGGACGCCGGCCTCCCCTTTCCGCGACGAGCTCCGCGACCTCGGCGTCGCCGCGCTGATCCGCGACGACGCCGAGGCCACCGCGCTCGCGTCCACTGACTTCGGCAACGTGACGGTCGCGCCGGCGGCGGCCGTGCTCTATCCGTCGTGCCCCGCAGACATTGCCGCGCTGCTGCGCGCCTCGTGCGCGCGCTCGTCCCCGTTCCCGGTGTCCGCCCGGGGACGCGGCCACTCCGTACGTGGCCAGGCGGCCGCGACCGACGGCGTCGTCGTCGACATGCCGTCGCTCGGACGCCTCGGCGGAGGCTCCACTGCGTCCCGCCTCTCCGTGTCGGTTGAAGGCCAGTACATAGACGCCGGCGGCGAACAGCTCTGGGTGGACGTGCTGCACGCCGCCCTCGCGCACGGCCTAACGCCGCGTTCGTGGACCGACTACCTCCACCTCACCGTCGGCGGCACGCTCTCCAACGCCGGCATCAGCGGCCAGGCCTTCCGCTACGGCCCCCAGATTTCCAACGTCCAAGAACTGGACGTCATCACCGGTGAGTACGCTGCGTACATGCACGCTTCATACTTCATTGATGACAGCACGTTCACTTACGTTCTTGACTACTTGTAAATATGTAGGGCTCGGAGAGATGGTGACGTGTTCGAAGGGGAGGAACTCCGACCTATTCGACGCCGTGCTGGGCGGGCTTGGGCAGTTCGGCGTCATAACGCGAGCGCGCATACCGCTCGTGCCCGCGCCGACGAGGGCGCGCTGGGTGCGCCTCCTGTACACGGGCGCCGCCTCACTCACCGGCGACCAGGAGCAGCTCATAGACGTCGAGCGTGCCAACGCGCTGTCCGGGCTCATGGACTACGTCGAGGGCACGGTCCTCGCGGACAAGGGCCTGATCGGGAGCTGGCGCTCGCCGTCGCCGTCGTCATCGTCCTTCTGCTCGGAGCCCGACGCCGCAGCGCGCGTCGCCAAGCTCGCCGAGGAGGCAGGCGGCGTCCTCTACTGCCTTGAGGGAGCGCTATACTACGGCGGAACGGCCGGCGGCGAGCCTGACGTCGAAAAGGTAATAAACGACCACCTTTGTCGGTGCGGGTGCCCGTCGTGTAGCGCTGGTAAAGGTAAACTACATGGGACCCATCGAGTCATGGGATCGTGACTTTTGGCCTCCTATGACGTGGATGCATGCGTGCATGGCTCAAGCTTGCATGCAGATCCGTGCACCACCAACGTCGTAGTACGTACTTGGCCTAGCCTCTGCCTGCCCTTGGAAATGCGCATCTCACTGCCTTTTCCGTCGGGAAAATATTTTTTTGTTGCTTTCTCACTGTTTTCCAAACTTCATAAAAAACACAGGTAAAAATTGCAGTACAGCACGTGTGGCATTTTAAAAAACGTGTGCAGGCTATTTATATAGAGAGATGACGGGAGCTAAAATAAAACAATGCCAATCTATGATTAGATTTCTGGTAACAAATTTATTAGGAATCCGCTAAGTTCCACATCATCGAAACTGCTTTTTTTGTTGAGGATCAATGCCGCTGCTTTATTTCACCTTAACCGAAACTAGGAATGTCGTCCGAAAGAAACTCCAGAATGTGCTCTGGGGTACAGAAAACCAAACTTTACAAAGACGCTCACCTAAACCTAACTTAGCTAGCTTATCAGCGGCTCTATTGGCATCACGACCATTCCACGCCACTTTAACTTCCAAGAAAGGAAGGAGCAAGTTTTAAAATTCCTGGACATGAGGGCCGAATCATCGAGACTGCTAAGGTGGTACAAATCATATGTGCAGAAACTTTTCTTTTAGTTACCTATAAAAAACTTTTCTTTTAGCCGAAAACAATAAAGCAGCATGCACACAATTTCCCATTCTAAATTTATAATTGCGCAATGGTAAATGCACACTCGTTTTGGCATTGAGTTGATCCAAAGGCTCACCAGAATGACCAGTGTGAGTTGTGAGTTTATATTATGAGATCCATAAGCCTCTCACAACAGTAGAAAATATACCTTTGCCAGAATTATATAAGTGCATCCATGTCGACATATAAGCTTTTCAGCATCGATCAACAGTATTTCCATGGAGTGTTATATCTGTTAGCCAGTCACCTAGTAGGCTAGCGCACGAACAAGCTAGATCCGATGTATGGGATGGGACAGGGACCTTACATGCAGATGCCTGGCCTACATGCTCTACCACTTCCATGCATATACACGACACACTGTGCCCGCCACCAATTGCTCAAAAAGTAAAACTCGCTCGTTCACCTTATAATAATTTGTACGGTATTTGTCCTGGTCTCTTGCGGAGTAGATGGCTGGAAAGGTCAGCATAATGGTGGCACGTCCATATTTTTCATAACAGTTTTGTTAAGTCACTGTCGACTGATACTTTGTTATGTCTCAGTCCATGCTATCTTCCAAACATACATGGAAATTCGTACGAAAATTCTATTTTTGGCCTTTTCTTTTTTCTTCTTGTATACTAGTATATCACTTGACCTACACCCGGAGGCAGATTTATGGTCTATGGGGACATCTACACCCTATATGAAAAAAAAACATTTAGTAATTCAACAAAAAGTCAGAAATTCCTGAAAATATTTTTGAAATAAACTTGACCTTTTATTGTACTCGTGAGAAAAAATTCACAAAAAGAAAATCTCCCTTTGACTTCTTTTCAAAAAAACACAATTTTTGGCTAAAATAGTGAGAGTAGTGACCTATAATAGCAAATAAATTTTGTGTTTTTTGCTGTGAAGTCAACTTTGTTTTTTTCATGAAAATTTATATACTTGTGCAAAAGTAAGTCAAGTTTTTTGTCAAAATAGTTCTTACCTATTTTGACCTTTTATTAAAATATTAAAAAAATCTCCATATAGGGAGCATATATAACCAAGAACCAAAGTGTATTTTCCCTAGACACACCCTTTTCATAATGTAGTACTACTACTTTGACACGTCGATAGTCTCATGCATATGCATATGCATGCATGCATGCGTAAAACTGTTCACCGTGAAAAGTTAATTTTTTTTAGGGAAACAGTGTGAAAAGTTATTGACTGGTGCATGCATATACATGCAGAGGCTGGAGACGCTACTGCGTGAGCTGCGGTACGAGCGGGGCTTCGCGTCCGTGCATGACGTGTCTTACGTGGAGTTCCTGGACCGCGTGCGCGACGGCGAGCTCAAGCTCCGCGCCGCCGGTCAATGGGACGTGCCGCACCCCTGGCTCATTCTCTTCCTCCCGCGCTCCCGCGTCCTGGACTTCGCCGCCGGCGTCTTCCATGGCATCCTCCGCCGCGGCGTCACCGGCGCCAAGGGACCCATCCTCGTCTACCCCATGAACCGGAACAGGTGGGACAGCGACTTGTCGGCGGTGTTCCCGGAGGAGGAAGAGATGTTCTACACGGTGGGAATCCTCCGGCCGGCCGTGTCCGACGGCGACCTTGGGCGCCTGGAGGAGCAGAACGACGAGATCTTACGGTTCTGCGAGGAGGCCAGGATACGGTGCGTGGAGTACCTGTCGTACTACCCCGACCAGGCCGGGTGGGAGAAGAAGCACTTTGGTCCGGCCAAGTGGGCCAGGTTCGTGGAGCGGAAGAGGAAGTATGATCCCAAGGCGATCCTGTCCCGTGGCCAGAGAATTTTCGCATCCTCGCTGGCTTGA
CDS Sequence
- >JQ797673
ATGGCTGCTCTCTTCGTGCTCGGCTGCTTCCTGCGGACCGTCCAGACCGCACGGGCTGACGCCGACGCGCTCGCGTGGACGCCGGCCTCCCCTTTCCGCGACGAGCTCCGCGACCTCGGCGTCGCCGCGCTGATCCGCGACGACGCCGAGGCCACCGCGCTCGCGTCCACTGACTTCGGCAACGTGACGGTCGCGCCGGCGGCGGCCGTGCTCTATCCGTCGTGCCCCGCAGACATTGCCGCGCTGCTGCGCGCCTCGTGCGCGCGCTCGTCCCCGTTCCCGGTGTCCGCCCGGGGACGCGGCCACTCCGTACGTGGCCAGGCGGCCGCGACCGACGGCGTCGTCGTCGACATGCCGTCGCTCGGACGCCTCGGCGGAGGCTCCACTGCGTCCCGCCTCTCCGTGTCGGTTGAAGGCCAGTACATAGACGCCGGCGGCGAACAGCTCTGGGTGGACGTGCTGCACGCCGCCCTCGCGCACGGCCTAACGCCGCGTTCGTGGACCGACTACCTCCACCTCACCGTCGGCGGCACGCTCTCCAACGCCGGCATCAGCGGCCAGGCCTTCCGCTACGGCCCCCAGATTTCCAACGTCCAAGAACTGGACGTCATCACCGGGCTCGGAGAGATGGTGACGTGTTCGAAGGGGAGGAACTCCGACCTATTCGACGCCGTGCTGGGCGGGCTTGGGCAGTTCGGCGTCATAACGCGAGCGCGCATACCGCTCGTGCCCGCGCCGACGAGGGCGCGCTGGGTGCGCCTCCTGTACACGGGCGCCGCCTCACTCACCGGCGACCAGGAGCAGCTCATAGACGTCGAGCGTGCCAACGCGCTGTCCGGGCTCATGGACTACGTCGAGGGCACGGTCCTCGCGGACAAGGGCCTGATCGGGAGCTGGCGCTCGCCGTCGCCGTCGTCATCGTCCTTCTGCTCGGAGCCCGACGCCGCAGCGCGCGTCGCCAAGCTCGCCGAGGAGGCAGGCGGCGTCCTCTACTGCCTTGAGGGAGCGCTATACTACGGCGGAACGGCCGGCGGCGAGCCTGACGTCGAAAAGAGGCTGGAGACGCTACTGCGTGAGCTGCGGTACGAGCGGGGCTTCGCGTCCGTGCATGACGTGTCTTACGTGGAGTTCCTGGACCGCGTGCGCGACGGCGAGCTCAAGCTCCGCGCCGCCGGTCAATGGGACGTGCCGCACCCCTGGCTCATTCTCTTCCTCCCGCGCTCCCGCGTCCTGGACTTCGCCGCCGGCGTCTTCCATGGCATCCTCCGCCGCGGCGTCACCGGCGCCAAGGGACCCATCCTCGTCTACCCCATGAACCGGAACAGGTGGGACAGCGACTTGTCGGCGGTGTTCCCGGAGGAGGAAGAGATGTTCTACACGGTGGGAATCCTCCGGCCGGCCGTGTCCGACGGCGACCTTGGGCGCCTGGAGGAGCAGAACGACGAGATCTTACGGTTCTGCGAGGAGGCCAGGATACGGTGCGTGGAGTACCTGTCGTACTACCCCGACCAGGCCGGGTGGGAGAAGAAGCACTTTGGTCCGGCCAAGTGGGCCAGGTTCGTGGAGCGGAAGAGGAAGTATGATCCCAAGGCGATCCTGTCCCGTGGCCAGAGAATTTTCGCATCCTCGCTGGCTTGA
Protein Sequence
- >JQ797673
MAALFVLGCFLRTVQTARADADALAWTPASPFRDELRDLGVAALIRDDAEATALASTDFGNVTVAPAAAVLYPSCPADIAALLRASCARSSPFPVSARGRGHSVRGQAAATDGVVVDMPSLGRLGGGSTASRLSVSVEGQYIDAGGEQLWVDVLHAALAHGLTPRSWTDYLHLTVGGTLSNAGISGQAFRYGPQISNVQELDVITGLGEMVTCSKGRNSDLFDAVLGGLGQFGVITRARIPLVPAPTRARWVRLLYTGAASLTGDQEQLIDVERANALSGLMDYVEGTVLADKGLIGSWRSPSPSSSSFCSEPDAAARVAKLAEEAGGVLYCLEGALYYGGTAGGEPDVEKRLETLLRELRYERGFASVHDVSYVEFLDRVRDGELKLRAAGQWDVPHPWLILFLPRSRVLDFAAGVFHGILRRGVTGAKGPILVYPMNRNRWDSDLSAVFPEEEEMFYTVGILRPAVSDGDLGRLEEQNDEILRFCEEARIRCVEYLSYYPDQAGWEKKHFGPAKWARFVERKRKYDPKAILSRGQRIFASSLA