Information report for TaCKX6-D1
Gene Details
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Functional Descriptions
- TaCKX6-D1, the ortholog of rice OsCKX2, is associated with grain weight in hexaploid wheat.
- TaCKX6-D1, a wheat ortholog of rice OsCKX2, was cloned and its haplotype variants were determined to be significantly associated with the 1000-grain weight on the basis of linkage mapping, association analysis and gene expression analysis.
- Sequence variations among modern cultivars, landraces and wild species suggest a significant domestication signature at the TaCKX6-D1 locus in Chinese wheat germplasm.
- TaCKX6-D1 may serve as a useful gene for the breeding of high-yielding wheat.
- An upstream gene or cis factor may affect the function of TaCKX6-D1, and the diversity of the regulator gene or cis element and the 18-bp indel are in linkage disequilibrium, just like tb1 in maize.
Functional Keywords
Literature and News
Gene Resources
- NCBI ID: JQ797673.1
- UniProt accessions: I4AZT3
- EMBL: JQ797673
- AlphaFoldDB: I4AZT3
- GO: GO:0009690 , GO:0019139 , GO:0071949
- InterPro: IPR006094 , IPR015345 , IPR016164 , IPR016166
- PANTHER: PTHR13878 , PTHR13878:SF170
- SUPFAM: SSF55103 , SSF56176
- PROSITE: PS51387
- Gene3D: 3.30.43.10 , 3.30.465.10 , 3.40.462.10
Sequences
cDNA Sequence
- >JQ797673
ATGGCTGCTCTCTTCGTGCTCGGCTGCTTCCTGCGGACCGTCCAGACCGCACGGGCTGACGCCGACGCGCTCGCGTGGACGCCGGCCTCCCCTTTCCGCGACGAGCTCCGCGACCTCGGCGTCGCCGCGCTGATCCGCGACGACGCCGAGGCCACCGCGCTCGCGTCCACTGACTTCGGCAACGTGACGGTCGCGCCGGCGGCGGCCGTGCTCTATCCGTCGTGCCCCGCAGACATTGCCGCGCTGCTGCGCGCCTCGTGCGCGCGCTCGTCCCCGTTCCCGGTGTCCGCCCGGGGACGCGGCCACTCCGTACGTGGCCAGGCGGCCGCGACCGACGGCGTCGTCGTCGACATGCCGTCGCTCGGACGCCTCGGCGGAGGCTCCACTGCGTCCCGCCTCTCCGTGTCGGTTGAAGGCCAGTACATAGACGCCGGCGGCGAACAGCTCTGGGTGGACGTGCTGCACGCCGCCCTCGCGCACGGCCTAACGCCGCGTTCGTGGACCGACTACCTCCACCTCACCGTCGGCGGCACGCTCTCCAACGCCGGCATCAGCGGCCAGGCCTTCCGCTACGGCCCCCAGATTTCCAACGTCCAAGAACTGGACGTCATCACCGGTGAGTACGCTGCGTACATGCACGCTTCATACTTCATTGATGACAGCACGTTCACTTACGTTCTTGACTACTTGTAAATATGTAGGGCTCGGAGAGATGGTGACGTGTTCGAAGGGGAGGAACTCCGACCTATTCGACGCCGTGCTGGGCGGGCTTGGGCAGTTCGGCGTCATAACGCGAGCGCGCATACCGCTCGTGCCCGCGCCGACGAGGGCGCGCTGGGTGCGCCTCCTGTACACGGGCGCCGCCTCACTCACCGGCGACCAGGAGCAGCTCATAGACGTCGAGCGTGCCAACGCGCTGTCCGGGCTCATGGACTACGTCGAGGGCACGGTCCTCGCGGACAAGGGCCTGATCGGGAGCTGGCGCTCGCCGTCGCCGTCGTCATCGTCCTTCTGCTCGGAGCCCGACGCCGCAGCGCGCGTCGCCAAGCTCGCCGAGGAGGCAGGCGGCGTCCTCTACTGCCTTGAGGGAGCGCTATACTACGGCGGAACGGCCGGCGGCGAGCCTGACGTCGAAAAGGTAATAAACGACCACCTTTGTCGGTGCGGGTGCCCGTCGTGTAGCGCTGGTAAAGGTAAACTACATGGGACCCATCGAGTCATGGGATCGTGACTTTTGGCCTCCTATGACGTGGATGCATGCGTGCATGGCTCAAGCTTGCATGCAGATCCGTGCACCACCAACGTCGTAGTACGTACTTGGCCTAGCCTCTGCCTGCCCTTGGAAATGCGCATCTCACTGCCTTTTCCGTCGGGAAAATATTTTTTTGTTGCTTTCTCACTGTTTTCCAAACTTCATAAAAAACACAGGTAAAAATTGCAGTACAGCACGTGTGGCATTTTAAAAAACGTGTGCAGGCTATTTATATAGAGAGATGACGGGAGCTAAAATAAAACAATGCCAATCTATGATTAGATTTCTGGTAACAAATTTATTAGGAATCCGCTAAGTTCCACATCATCGAAACTGCTTTTTTTGTTGAGGATCAATGCCGCTGCTTTATTTCACCTTAACCGAAACTAGGAATGTCGTCCGAAAGAAACTCCAGAATGTGCTCTGGGGTACAGAAAACCAAACTTTACAAAGACGCTCACCTAAACCTAACTTAGCTAGCTTATCAGCGGCTCTATTGGCATCACGACCATTCCACGCCACTTTAACTTCCAAGAAAGGAAGGAGCAAGTTTTAAAATTCCTGGACATGAGGGCCGAATCATCGAGACTGCTAAGGTGGTACAAATCATATGTGCAGAAACTTTTCTTTTAGTTACCTATAAAAAACTTTTCTTTTAGCCGAAAACAATAAAGCAGCATGCACACAATTTCCCATTCTAAATTTATAATTGCGCAATGGTAAATGCACACTCGTTTTGGCATTGAGTTGATCCAAAGGCTCACCAGAATGACCAGTGTGAGTTGTGAGTTTATATTATGAGATCCATAAGCCTCTCACAACAGTAGAAAATATACCTTTGCCAGAATTATATAAGTGCATCCATGTCGACATATAAGCTTTTCAGCATCGATCAACAGTATTTCCATGGAGTGTTATATCTGTTAGCCAGTCACCTAGTAGGCTAGCGCACGAACAAGCTAGATCCGATGTATGGGATGGGACAGGGACCTTACATGCAGATGCCTGGCCTACATGCTCTACCACTTCCATGCATATACACGACACACTGTGCCCGCCACCAATTGCTCAAAAAGTAAAACTCGCTCGTTCACCTTATAATAATTTGTACGGTATTTGTCCTGGTCTCTTGCGGAGTAGATGGCTGGAAAGGTCAGCATAATGGTGGCACGTCCATATTTTTCATAACAGTTTTGTTAAGTCACTGTCGACTGATACTTTGTTATGTCTCAGTCCATGCTATCTTCCAAACATACATGGAAATTCGTACGAAAATTCTATTTTTGGCCTTTTCTTTTTTCTTCTTGTATACTAGTATATCACTTGACCTACACCCGGAGGCAGATTTATGGTCTATGGGGACATCTACACCCTATATGAAAAAAAAACATTTAGTAATTCAACAAAAAGTCAGAAATTCCTGAAAATATTTTTGAAATAAACTTGACCTTTTATTGTACTCGTGAGAAAAAATTCACAAAAAGAAAATCTCCCTTTGACTTCTTTTCAAAAAAACACAATTTTTGGCTAAAATAGTGAGAGTAGTGACCTATAATAGCAAATAAATTTTGTGTTTTTTGCTGTGAAGTCAACTTTGTTTTTTTCATGAAAATTTATATACTTGTGCAAAAGTAAGTCAAGTTTTTTGTCAAAATAGTTCTTACCTATTTTGACCTTTTATTAAAATATTAAAAAAATCTCCATATAGGGAGCATATATAACCAAGAACCAAAGTGTATTTTCCCTAGACACACCCTTTTCATAATGTAGTACTACTACTTTGACACGTCGATAGTCTCATGCATATGCATATGCATGCATGCATGCGTAAAACTGTTCACCGTGAAAAGTTAATTTTTTTTAGGGAAACAGTGTGAAAAGTTATTGACTGGTGCATGCATATACATGCAGAGGCTGGAGACGCTACTGCGTGAGCTGCGGTACGAGCGGGGCTTCGCGTCCGTGCATGACGTGTCTTACGTGGAGTTCCTGGACCGCGTGCGCGACGGCGAGCTCAAGCTCCGCGCCGCCGGTCAATGGGACGTGCCGCACCCCTGGCTCATTCTCTTCCTCCCGCGCTCCCGCGTCCTGGACTTCGCCGCCGGCGTCTTCCATGGCATCCTCCGCCGCGGCGTCACCGGCGCCAAGGGACCCATCCTCGTCTACCCCATGAACCGGAACAGGTGGGACAGCGACTTGTCGGCGGTGTTCCCGGAGGAGGAAGAGATGTTCTACACGGTGGGAATCCTCCGGCCGGCCGTGTCCGACGGCGACCTTGGGCGCCTGGAGGAGCAGAACGACGAGATCTTACGGTTCTGCGAGGAGGCCAGGATACGGTGCGTGGAGTACCTGTCGTACTACCCCGACCAGGCCGGGTGGGAGAAGAAGCACTTTGGTCCGGCCAAGTGGGCCAGGTTCGTGGAGCGGAAGAGGAAGTATGATCCCAAGGCGATCCTGTCCCGTGGCCAGAGAATTTTCGCATCCTCGCTGGCTTGA
CDS Sequence
- >JQ797673
ATGGCTGCTCTCTTCGTGCTCGGCTGCTTCCTGCGGACCGTCCAGACCGCACGGGCTGACGCCGACGCGCTCGCGTGGACGCCGGCCTCCCCTTTCCGCGACGAGCTCCGCGACCTCGGCGTCGCCGCGCTGATCCGCGACGACGCCGAGGCCACCGCGCTCGCGTCCACTGACTTCGGCAACGTGACGGTCGCGCCGGCGGCGGCCGTGCTCTATCCGTCGTGCCCCGCAGACATTGCCGCGCTGCTGCGCGCCTCGTGCGCGCGCTCGTCCCCGTTCCCGGTGTCCGCCCGGGGACGCGGCCACTCCGTACGTGGCCAGGCGGCCGCGACCGACGGCGTCGTCGTCGACATGCCGTCGCTCGGACGCCTCGGCGGAGGCTCCACTGCGTCCCGCCTCTCCGTGTCGGTTGAAGGCCAGTACATAGACGCCGGCGGCGAACAGCTCTGGGTGGACGTGCTGCACGCCGCCCTCGCGCACGGCCTAACGCCGCGTTCGTGGACCGACTACCTCCACCTCACCGTCGGCGGCACGCTCTCCAACGCCGGCATCAGCGGCCAGGCCTTCCGCTACGGCCCCCAGATTTCCAACGTCCAAGAACTGGACGTCATCACCGGGCTCGGAGAGATGGTGACGTGTTCGAAGGGGAGGAACTCCGACCTATTCGACGCCGTGCTGGGCGGGCTTGGGCAGTTCGGCGTCATAACGCGAGCGCGCATACCGCTCGTGCCCGCGCCGACGAGGGCGCGCTGGGTGCGCCTCCTGTACACGGGCGCCGCCTCACTCACCGGCGACCAGGAGCAGCTCATAGACGTCGAGCGTGCCAACGCGCTGTCCGGGCTCATGGACTACGTCGAGGGCACGGTCCTCGCGGACAAGGGCCTGATCGGGAGCTGGCGCTCGCCGTCGCCGTCGTCATCGTCCTTCTGCTCGGAGCCCGACGCCGCAGCGCGCGTCGCCAAGCTCGCCGAGGAGGCAGGCGGCGTCCTCTACTGCCTTGAGGGAGCGCTATACTACGGCGGAACGGCCGGCGGCGAGCCTGACGTCGAAAAGAGGCTGGAGACGCTACTGCGTGAGCTGCGGTACGAGCGGGGCTTCGCGTCCGTGCATGACGTGTCTTACGTGGAGTTCCTGGACCGCGTGCGCGACGGCGAGCTCAAGCTCCGCGCCGCCGGTCAATGGGACGTGCCGCACCCCTGGCTCATTCTCTTCCTCCCGCGCTCCCGCGTCCTGGACTTCGCCGCCGGCGTCTTCCATGGCATCCTCCGCCGCGGCGTCACCGGCGCCAAGGGACCCATCCTCGTCTACCCCATGAACCGGAACAGGTGGGACAGCGACTTGTCGGCGGTGTTCCCGGAGGAGGAAGAGATGTTCTACACGGTGGGAATCCTCCGGCCGGCCGTGTCCGACGGCGACCTTGGGCGCCTGGAGGAGCAGAACGACGAGATCTTACGGTTCTGCGAGGAGGCCAGGATACGGTGCGTGGAGTACCTGTCGTACTACCCCGACCAGGCCGGGTGGGAGAAGAAGCACTTTGGTCCGGCCAAGTGGGCCAGGTTCGTGGAGCGGAAGAGGAAGTATGATCCCAAGGCGATCCTGTCCCGTGGCCAGAGAATTTTCGCATCCTCGCTGGCTTGA
Protein Sequence
- >JQ797673
MAALFVLGCFLRTVQTARADADALAWTPASPFRDELRDLGVAALIRDDAEATALASTDFGNVTVAPAAAVLYPSCPADIAALLRASCARSSPFPVSARGRGHSVRGQAAATDGVVVDMPSLGRLGGGSTASRLSVSVEGQYIDAGGEQLWVDVLHAALAHGLTPRSWTDYLHLTVGGTLSNAGISGQAFRYGPQISNVQELDVITGLGEMVTCSKGRNSDLFDAVLGGLGQFGVITRARIPLVPAPTRARWVRLLYTGAASLTGDQEQLIDVERANALSGLMDYVEGTVLADKGLIGSWRSPSPSSSSFCSEPDAAARVAKLAEEAGGVLYCLEGALYYGGTAGGEPDVEKRLETLLRELRYERGFASVHDVSYVEFLDRVRDGELKLRAAGQWDVPHPWLILFLPRSRVLDFAAGVFHGILRRGVTGAKGPILVYPMNRNRWDSDLSAVFPEEEEMFYTVGILRPAVSDGDLGRLEEQNDEILRFCEEARIRCVEYLSYYPDQAGWEKKHFGPAKWARFVERKRKYDPKAILSRGQRIFASSLA