Information report for TaARF15-D1
Gene Details
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Functional Descriptions
- The reverse-transcription quantitative PCR (RT-qPCR) analysis showed that the TaARF15 homoeologs were expressed constitutively in various wheat tissues but were preferentially expressed in stems and young spikes, which may be related to the transport and distribution of auxin
- The TaARF15 homoeologs share the same three domains including a DNA-binding domain (DBD), a middle region (MR), and a C-terminal dimerization domain (CTD), suggesting they might share similar biological functions.
- TaARF15 homoeologs (TaARF15-A1, TaARF15-B1, and TaARF15-D1) in wheat. OE of TaARF15-A1 delays leaf senescence, while downregulation of TaARF15 by RNA-interference (RNAi) or knockout of this gene by CRISPR-Cas9-mediated genome editing accelerates maturation.
- The auxin response factor TaARF15 negatively regulates senescence in common wheat.
- Wheat AUXIN RESPONSE FACTOR 15 (TaARF15) delays senescence through interaction at the TaNAM1 locus.
Functional Keywords
Literature and News
Gene Resources
- NCBI ID: 123143748
- UniProt accessions: A0A3B6PK25
- EnsemblPlants: TraesCS6B02G141300.1
- Gramene: TraesCS6B02G141300.1
- GO: GO:0003677 , GO:0005634 , GO:0006355 , GO:0009734
- OMA: MDHENDV
- InterPro: IPR003340 , IPR010525 , IPR015300 , IPR033389 , IPR044835 , IPR053793
- PANTHER: PTHR31384 , PTHR31384:SF14
- SUPFAM: SSF101936 , SSF54277
- PROSITE: PS50863 , PS51745
- Gene3D: 2.30.30.1040 , 2.40.330.10 , 3.10.20.90
- OrthoDB: A0A3B6PK25
- SMR: A0A3B6PK25
- CDD: cd10017
Sequences
cDNA Sequence
- >TraesCS6D02G102300.1
GAGACTCACTTCACTAAAAACGGAGTATAAAAAAGAACTCAAAGAGGAGAGAGAGAGAGAGACAGAAGAAGCGTCTCGGTTTTAACTCCCGACAGGCAGCAGCACACACGACGCACCAACCAGCGACAGCAAGCCCAGAGGCCTGCCTCAGCGGCAGCAGCTCACAACTCTCACCCCTCCCTCCCTCTCTCTCTAGCTCCCTCTCTCTCTCTAGTAGTAGGACTAGACGGGGTCCTTGGTCTCCGTGTTGCTGCTGCTTCTGGTCTAGCTTGTCGGGACGGAGGCGCCGCCGCCGCTCGCTGGGGCACGGCAGCTTTCTGGAAGAGCCCGGCCGGCGAGCCAGCCGGTGACCAGGACCCATCCGGCGAAAAGGGACGAAAAAGAAGAACTCGGCGCCGCGCGCGCTCCTCTGTGACTCATGCGCGCGAGCCGCCGAAGCTAGCAAGCTTCCGCGTGTGAGGAGGCGGCCATGGCGCAGTCGCCGGCAAGCTCCGCCGTCGCCGCGCCGGCTCCATGCGAAGGGGAGCGGAAGGCGCCGGCGATCAACGGGGAGCTGTGGCACGCCTGCGCCGGCCCGCTGGTGTCGCTGCCGCCGGTGGGCAGCCTCGTCGTCTACTTCCCCCAAGGCCACAGTGAGCAGGTTGCAGCTTCTATGCAAAAGGATGTGGAAGCTCACGTACCGAGCTACCCCAATCTTCCCTCAAAGTTGATATGTCTTCTGCACAGCGTCACTTTGCAAGCAGACCCGGATACTGATGAGGTGTACGCACAGATGACTCTTCAGCCAGTGAATACATATGCAAAAGAGGCGTTGCAGCTGTCAGAGCTTGCGCTAAGACAAGCGAGGCCACAGATGGAGTTCTTCTGCAAGACGCTCACCGCGAGCGATACGAGCACACACGGAGGCTTCTCCGTGCCTCGCCGTGCAGCGGAGAAGATATTCCCTTCCCTGGATTTCTCGTTGCAGCCTCCGTGCCAAGAGCTGCAGGCCAGGGATATACATGACAATGTGTGGACATTCCGTCATATATTTCGGGGTCAGCCCAAAAGACATTTACTTACTACTGGTTGGAGCCTCTTTGTGAGTGGCAAGAAGCTATTTGCTGGTGATTCTGTCATATTCGTTAGAGATGAAAAGCAGCAACTTCTACTGGGAATCAGGCGCGCTAACCGACAGCCCACGAACATATCGTCTTCGGTACTTTCAAGCGACAGTATGCACATAGGGGTCCTTGCCGCAGCTGCACATGCTTCTGCCAACACCAGCCCGTTTACCATATTTTATAACCCTAGGGCCAGTCCTACTGAATTTGTTATCCCATTTGCCAAATACCAGAAGGCAATGTACAGTAATCAGATCTCTTTAGGGATGCGCTTCCGCATGATGTGCGAGACGGAGGAACTAGGAACAAGACGCTACATGGGTACGATAACTGGAATAAGTGATCTAGATCCAGTGAGATGGAAAAACTCCCAGTGGCGCAGCTTACAGGTTGGGTGGGACGAGTCGGCTGCAGGAGAAAGAAGGAACAGAGTTTCAATCTGGGAGATTGAACCGCTTGCTGCTCCTTTTTTCATTTGTCCCCAGCCATTCTTTGGTGTGAAGCGCCCTAGGCAATTAGATGACGAGTCGTTGGAGATGGAAAGTCTTATGAAGAGAGCAATGCCTTGGCTTGGTGAGGAGATATGCATAAAGGACCCTCAAACCCAGAGTGCTACAATGCCTGGCCTGAGTTTGGTTCAGTGGATGAATATGAACCGGCAGCAGAGCTCCTCATTAGCTAGCACAGCCATGCAGTCCGAGTACCTCCGATCAGCGAGTAACCCTGCGATGCAAAATATTGGCGCTGCCGATCTTGCAAGGCAGTTATATATGCAGAACCATCTACTACAGCAGAATAGCATGCAGTTTAATCCTCCCAAACTCCATCAGCAAATGAAACCTATTAATGATTTGTCAAATGCAGCACTTCCATTGAATCAACTAGGTGCCATCAGAAATCACCAAGATCAGAAGCAAGATCAGCAGAGGCAACAGCAGTCCGGTATCCAAGCAATTCCCCTAAGCCAGGCCCAGGCTCAAACTAATATTGTCCAGGCACAGGTAATTCTCCAGAATCAGATGCAGCAACAACAGCAACAAAAACAACCACCACCATCACCAACTCAAAACCAGCATGGGGCCAGTGGCCAGCACCTGCTTCAGTCTCATCAACTGCAGGACCAAAATTTGCAAATGCAGCAGCAACAGCTTTTACTTCACCAACAGTTACAGCAGCAGCAGCAGCTAAATAAGTTGCCTGGGCAGCTAGCTAATCTGGCAAGTCAGCAAACACAATTGTCTGATCAGGAACTCCACTTGCAGCTGTTACAGAAACTACAGCAGCAGTCACTGATGTCACAGTCCGCAGTTACACTCTCACGATTACCAATAATCCAAGAGCAGCAAAATTTTCTTGTAGACATGCAACAGCAGTTGTCGAATTCGCATTCGCTTGCCCAGCAACAAGTGATGCCCCAACAGGACTGCAGAACTTCTTCATCGCAGACAACACAACTGCCACCGCCCATTCAGCAAGAGCAGCAACAGCAGAAGCCTTCACAGAAACAGGTTGCACCTACATATGTGTCAGAAGCTGCCTTTGCACAGATCTCTTCTACCAGTGTGATCCCCAAAACTGGTAACAGTATGATAGTTCCGGGTGCTGCACAATCTGCTGTTACAGAAGAAATACCTTCTTGTTCGACATCCCCTTCCACAGCTAATGGCAACCATCTTGTGCAGCCAACCATTGGCAGGAATGATCATTGCAAAATCAGCACAGAGAAGGTGCCACACTCTATTGCTCAGATGTCAATTCTGACCCCCATTGAAGCTGTATCAGTCACTCCAGTAACGACCAAGGAATTGCCAAAGTTAAACAATGGTGTTAAGTCAAGTGCGATCACCTCGAAATTACCAAATGTTGTGTCCGGCCTTCAAAATTTTATGAACAATGCACTGCCAACAGACAACCTGGAAACAGCTTCGTCAGCGACTTCATTATGGCCTTCACAAACAGATGGACTTCTGCATCAAGGTTTCGCCACTTCTAACTTCAACCAGCACCAGATGTTCAAAGATGAACTTCCTGATGTAGAAATTCAAGGTGTGGATCCAAGTAACAGTGCCCTCTTTGGGATGAACAATGATGGCCCGTTAGGGTTTCCTATGGAAACAGAAGGCTTGTTGGAAAATGCACTTGATTCTGTGAAGTATCAGAATCATTTCTCAACTGATGATGAGAACAACTACCAGATGCAAAAGGATGCCCGTCAAGAGATATCAACCTCCATGGTTTCACAGTCATTTGGTCAATCAGATATGGCTTTTAATTCCATCGATTCTGCAATTAATGATGGTGCCTTAATGAACAGAAGTTCTTGGCCTCCTGCTGCTCCACCACAGAGGATGCGTACATTCACCAAGGTGTACAAGCGTGGAGCTGTAGGCCGGTCCATTGACATCGGTAGGTTCTCTGGATATGGAGAACTGAATCAAGCTTTGGCCCGCATGTTTGGTATAGAGGGGCAACTTGAAGACCGACAGAGAATAGGTTGGAAGCTAGTCTACACAGATCATGAGGATGACGTCCTACTTCTCGGCGATGACCCATGGGAGGAGTTTGTGAATTGCGTCAAGTGCATTAGGATCCTGTCCCCTCAAGAAGTGCAGAAGATGAGTCTGGATGGTGATTTAGGGAGCAATGTTCTGCCCAACCAGGCTTGCAGCAGCTCAGATGGAGGGAATACTTGGAAGCCTCGTTACGAGCAGAACTCCGGGAACCCTTCCATCGGCCCCTATGACCAATTCGAATGACATGACTTAGAGGCGCATTCACATAGTTGTCATGTTAACATCTTGGTTAGTTGTATTCACTATTTGTCTTCACCATTATGGATTCATGTGTACTACAGCCATCATCAAAGCTGCAAAAGAAATGCAGTGAAGAATGTAGTTTAGATGTGTCAGCTTATAGCTGTAAGGGAAAATGCTCCTCAGATTAGGTTTTCTTTTGGATATATATGTAGCTTTATCAGTTGAAACGAGTAGTAGGGATGAGAACTGAAAACTTTCCCAGAGTTGTTAGAGACCTGAGACACTTAGGCAAATCTGAAGATAGTATGTTCTTGGGAAGAACATTTGTACTGGACTATTGTTGGGTTGTGTGTAGCCCTTGTTAAGGTCACCATCCCCAAATAGAAACTGCTAGGTTTACTAAAAAAGATGGAACTGCGATATGAAATTTGGTTCAATCTACTGTTTGGTCTTATCAAACACCCATATGAAATTTGGTTCTAAATCCGACAAATGGACCTGTCAGCCGTTCATGGCATAC
CDS Sequence
- >TraesCS6D02G102300.1
ATGGCGCAGTCGCCGGCAAGCTCCGCCGTCGCCGCGCCGGCTCCATGCGAAGGGGAGCGGAAGGCGCCGGCGATCAACGGGGAGCTGTGGCACGCCTGCGCCGGCCCGCTGGTGTCGCTGCCGCCGGTGGGCAGCCTCGTCGTCTACTTCCCCCAAGGCCACAGTGAGCAGGTTGCAGCTTCTATGCAAAAGGATGTGGAAGCTCACGTACCGAGCTACCCCAATCTTCCCTCAAAGTTGATATGTCTTCTGCACAGCGTCACTTTGCAAGCAGACCCGGATACTGATGAGGTGTACGCACAGATGACTCTTCAGCCAGTGAATACATATGCAAAAGAGGCGTTGCAGCTGTCAGAGCTTGCGCTAAGACAAGCGAGGCCACAGATGGAGTTCTTCTGCAAGACGCTCACCGCGAGCGATACGAGCACACACGGAGGCTTCTCCGTGCCTCGCCGTGCAGCGGAGAAGATATTCCCTTCCCTGGATTTCTCGTTGCAGCCTCCGTGCCAAGAGCTGCAGGCCAGGGATATACATGACAATGTGTGGACATTCCGTCATATATTTCGGGGTCAGCCCAAAAGACATTTACTTACTACTGGTTGGAGCCTCTTTGTGAGTGGCAAGAAGCTATTTGCTGGTGATTCTGTCATATTCGTTAGAGATGAAAAGCAGCAACTTCTACTGGGAATCAGGCGCGCTAACCGACAGCCCACGAACATATCGTCTTCGGTACTTTCAAGCGACAGTATGCACATAGGGGTCCTTGCCGCAGCTGCACATGCTTCTGCCAACACCAGCCCGTTTACCATATTTTATAACCCTAGGGCCAGTCCTACTGAATTTGTTATCCCATTTGCCAAATACCAGAAGGCAATGTACAGTAATCAGATCTCTTTAGGGATGCGCTTCCGCATGATGTGCGAGACGGAGGAACTAGGAACAAGACGCTACATGGGTACGATAACTGGAATAAGTGATCTAGATCCAGTGAGATGGAAAAACTCCCAGTGGCGCAGCTTACAGGTTGGGTGGGACGAGTCGGCTGCAGGAGAAAGAAGGAACAGAGTTTCAATCTGGGAGATTGAACCGCTTGCTGCTCCTTTTTTCATTTGTCCCCAGCCATTCTTTGGTGTGAAGCGCCCTAGGCAATTAGATGACGAGTCGTTGGAGATGGAAAGTCTTATGAAGAGAGCAATGCCTTGGCTTGGTGAGGAGATATGCATAAAGGACCCTCAAACCCAGAGTGCTACAATGCCTGGCCTGAGTTTGGTTCAGTGGATGAATATGAACCGGCAGCAGAGCTCCTCATTAGCTAGCACAGCCATGCAGTCCGAGTACCTCCGATCAGCGAGTAACCCTGCGATGCAAAATATTGGCGCTGCCGATCTTGCAAGGCAGTTATATATGCAGAACCATCTACTACAGCAGAATAGCATGCAGTTTAATCCTCCCAAACTCCATCAGCAAATGAAACCTATTAATGATTTGTCAAATGCAGCACTTCCATTGAATCAACTAGGTGCCATCAGAAATCACCAAGATCAGAAGCAAGATCAGCAGAGGCAACAGCAGTCCGGTATCCAAGCAATTCCCCTAAGCCAGGCCCAGGCTCAAACTAATATTGTCCAGGCACAGGTAATTCTCCAGAATCAGATGCAGCAACAACAGCAACAAAAACAACCACCACCATCACCAACTCAAAACCAGCATGGGGCCAGTGGCCAGCACCTGCTTCAGTCTCATCAACTGCAGGACCAAAATTTGCAAATGCAGCAGCAACAGCTTTTACTTCACCAACAGTTACAGCAGCAGCAGCAGCTAAATAAGTTGCCTGGGCAGCTAGCTAATCTGGCAAGTCAGCAAACACAATTGTCTGATCAGGAACTCCACTTGCAGCTGTTACAGAAACTACAGCAGCAGTCACTGATGTCACAGTCCGCAGTTACACTCTCACGATTACCAATAATCCAAGAGCAGCAAAATTTTCTTGTAGACATGCAACAGCAGTTGTCGAATTCGCATTCGCTTGCCCAGCAACAAGTGATGCCCCAACAGGACTGCAGAACTTCTTCATCGCAGACAACACAACTGCCACCGCCCATTCAGCAAGAGCAGCAACAGCAGAAGCCTTCACAGAAACAGGTTGCACCTACATATGTGTCAGAAGCTGCCTTTGCACAGATCTCTTCTACCAGTGTGATCCCCAAAACTGGTAACAGTATGATAGTTCCGGGTGCTGCACAATCTGCTGTTACAGAAGAAATACCTTCTTGTTCGACATCCCCTTCCACAGCTAATGGCAACCATCTTGTGCAGCCAACCATTGGCAGGAATGATCATTGCAAAATCAGCACAGAGAAGGTGCCACACTCTATTGCTCAGATGTCAATTCTGACCCCCATTGAAGCTGTATCAGTCACTCCAGTAACGACCAAGGAATTGCCAAAGTTAAACAATGGTGTTAAGTCAAGTGCGATCACCTCGAAATTACCAAATGTTGTGTCCGGCCTTCAAAATTTTATGAACAATGCACTGCCAACAGACAACCTGGAAACAGCTTCGTCAGCGACTTCATTATGGCCTTCACAAACAGATGGACTTCTGCATCAAGGTTTCGCCACTTCTAACTTCAACCAGCACCAGATGTTCAAAGATGAACTTCCTGATGTAGAAATTCAAGGTGTGGATCCAAGTAACAGTGCCCTCTTTGGGATGAACAATGATGGCCCGTTAGGGTTTCCTATGGAAACAGAAGGCTTGTTGGAAAATGCACTTGATTCTGTGAAGTATCAGAATCATTTCTCAACTGATGATGAGAACAACTACCAGATGCAAAAGGATGCCCGTCAAGAGATATCAACCTCCATGGTTTCACAGTCATTTGGTCAATCAGATATGGCTTTTAATTCCATCGATTCTGCAATTAATGATGGTGCCTTAATGAACAGAAGTTCTTGGCCTCCTGCTGCTCCACCACAGAGGATGCGTACATTCACCAAGGTGTACAAGCGTGGAGCTGTAGGCCGGTCCATTGACATCGGTAGGTTCTCTGGATATGGAGAACTGAATCAAGCTTTGGCCCGCATGTTTGGTATAGAGGGGCAACTTGAAGACCGACAGAGAATAGGTTGGAAGCTAGTCTACACAGATCATGAGGATGACGTCCTACTTCTCGGCGATGACCCATGGGAGGAGTTTGTGAATTGCGTCAAGTGCATTAGGATCCTGTCCCCTCAAGAAGTGCAGAAGATGAGTCTGGATGGTGATTTAGGGAGCAATGTTCTGCCCAACCAGGCTTGCAGCAGCTCAGATGGAGGGAATACTTGGAAGCCTCGTTACGAGCAGAACTCCGGGAACCCTTCCATCGGCCCCTATGACCAATTCGAATGA
Protein Sequence
- >TraesCS6D02G102300.1
MAQSPASSAVAAPAPCEGERKAPAINGELWHACAGPLVSLPPVGSLVVYFPQGHSEQVAASMQKDVEAHVPSYPNLPSKLICLLHSVTLQADPDTDEVYAQMTLQPVNTYAKEALQLSELALRQARPQMEFFCKTLTASDTSTHGGFSVPRRAAEKIFPSLDFSLQPPCQELQARDIHDNVWTFRHIFRGQPKRHLLTTGWSLFVSGKKLFAGDSVIFVRDEKQQLLLGIRRANRQPTNISSSVLSSDSMHIGVLAAAAHASANTSPFTIFYNPRASPTEFVIPFAKYQKAMYSNQISLGMRFRMMCETEELGTRRYMGTITGISDLDPVRWKNSQWRSLQVGWDESAAGERRNRVSIWEIEPLAAPFFICPQPFFGVKRPRQLDDESLEMESLMKRAMPWLGEEICIKDPQTQSATMPGLSLVQWMNMNRQQSSSLASTAMQSEYLRSASNPAMQNIGAADLARQLYMQNHLLQQNSMQFNPPKLHQQMKPINDLSNAALPLNQLGAIRNHQDQKQDQQRQQQSGIQAIPLSQAQAQTNIVQAQVILQNQMQQQQQQKQPPPSPTQNQHGASGQHLLQSHQLQDQNLQMQQQQLLLHQQLQQQQQLNKLPGQLANLASQQTQLSDQELHLQLLQKLQQQSLMSQSAVTLSRLPIIQEQQNFLVDMQQQLSNSHSLAQQQVMPQQDCRTSSSQTTQLPPPIQQEQQQQKPSQKQVAPTYVSEAAFAQISSTSVIPKTGNSMIVPGAAQSAVTEEIPSCSTSPSTANGNHLVQPTIGRNDHCKISTEKVPHSIAQMSILTPIEAVSVTPVTTKELPKLNNGVKSSAITSKLPNVVSGLQNFMNNALPTDNLETASSATSLWPSQTDGLLHQGFATSNFNQHQMFKDELPDVEIQGVDPSNSALFGMNNDGPLGFPMETEGLLENALDSVKYQNHFSTDDENNYQMQKDARQEISTSMVSQSFGQSDMAFNSIDSAINDGALMNRSSWPPAAPPQRMRTFTKVYKRGAVGRSIDIGRFSGYGELNQALARMFGIEGQLEDRQRIGWKLVYTDHEDDVLLLGDDPWEEFVNCVKCIRILSPQEVQKMSLDGDLGSNVLPNQACSSSDGGNTWKPRYEQNSGNPSIGPYDQFE