Information report for TaAGO1b
Gene Details
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Functional Descriptions
- Two putative wheat Argonaute genes, TaAGO1b and TaAGO4, were cloned. Phylogenetic analysis, prediction of conserved domains and catalytic motifs, and modelling of their protein structures suggested that they encode functional Argonaute proteins.
- Expression analysis via Semi RT-PCR demonstrated that both TaAGO1b and TaAGO4 were highly expressed in all examined tissues, including the root, stem, leaf, anther, ovule, and mature seed, as well as in developing wheat kernels.
- These results indicated that both genes (TaAGO1b and TaAGO4) have important roles within the vernalization response, but their functioning might involve different regulatory mechanisms.
Literature and News
Gene Resources
- NCBI ID: JQ805149
- UniProt accessions: U3LKI5
- EMBL: JQ805149
- AlphaFoldDB: U3LKI5
- GO: GO:0003723 , GO:0031047
- InterPro: IPR003100 , IPR003165 , IPR012337 , IPR014811
- PANTHER: PTHR22891
- SUPFAM: SSF101690 , SSF53098
- PROSITE: PS50821 , PS50822
- Gene3D: 2.170.260.10 , 3.30.420.10 , 3.40.50.2300
- SMR: U3LKI5
- CDD: cd02846 , cd04657
Sequences
cDNA Sequence
- >JQ805149
AGTGAAGAAGCAGAGACGTAAGATTTGCGCGAATAAGGGAAGAGGAGTACCTTTTTCGATTGCCGGTGTGGTCACCTCCACATGTCGCGCCGATCTTCTTCTTTTTACCGGGGAAACCGATGTTCTAGAGGGTGCAGGCTTGGACGAACCCATGGCCAAATTGTTGACTGTGTTGCCGTGGCCGTATGTCGGCGGAGGTGAGCAGTGGACAAGTCGAGCAACAGTCTCAGAAACTTGACATCAGTGATCAAAGTTCGACCAGCCAAGCCATTCAACCGGCACCTGCATCAAGCAAATCAGTTCGATTCCCATTGCGCCCTGGAATGGGTAAATGTGGGGATAGGTGTGTGGTGAAAGCCAATCATTTCTTCGCGGAGCTCCCTGATAAAGACCTTCACCAATACGATGTGACCATAACGCCAGAGGTTACATCGCGAGGTGTTAATCGTGCTGTGATTGCAGAACTTGTAAAGCTGTATAGACAATCTCATATGAATGGACGTCTACCTGCCTATGATGGAAGGAAGAGCCTTTATACAGCTGGGCCATTACCATTTACTTCGAGGACATTTGAAATCGCTCTGCAAGATGAAGATGAAGGCCTTGTTGGTGGGCAAGCCACGCCAAGGCGTGAGAGACAATTCAGGGTGGTGATCAAATATGCTGCCCGTGCTGATCTCCATCATTTGGCTATGTTTCTAGCCGGGAGGCAACCAGATGCACCTCAAGAAGCTCTTCAGGTGCTTGACATTGTGCTACGGGAATTGCCTACTGCCAGGTATTCCCCAGTTAGTAGATCATTTTATTCTCCCAACCTAGGGAGACGTCAGAGACTTGGGGACGGTTTGGAAAGTTGGCGTGGATTTTACCAGAGTATAAGACCTACGCAGATGGGGCTTTCGCTGAATATTGATATGTCTTCTACAGCATTTATCGAGCCTCTCCCTGTGATTGAGTTTGTTGCTCAGCTTCTGTGCAGAGACATCTCAGTTAGACCGCCCACTGATTCAGATCGTGTGAAGATTAAAAAAGCCCTACGAGGTGTAAAGGTTGAGGTTACACATCGAGGAAACATGCGTAGGAAATACCGTATATCTGGCCTCACATCACAAGCAACACGAGAGCTATCATTCCCTGTTGATGATCGTGGTACTGTTAAGACTGTGGTGCAATACTTCCTGGAGACGTATGGTTTCAATATTCAGCACACCACTTTACCTTGCTTGCAAGTCGGTAATCAGCAAAGGCCGAATTATCTCCCCGTGGAGGTTTGTAAGATTGTTGAAGGACAACGCTACTCAAAACGACTGAATGAAAAACAAATAACTGCTCTACTGAAAGTGACTTGCCAGCGCCCTCAAGAGCGTGAGAAGGACATCTTGCAGACTGTGCATCACAATGCATACTATGAAGATCCATATGCACAGGAATTTGGCATAAAAATAGATGAGCAACTTGCATCGGCTGAAGCTCGTGTTCTGCCTCCGCCAAGGCTTAAGTACCATGATAGTGGCAGAGAGAAGGATGTCTTACCCAGGGTCGGCCAATGGAACATGATGAACAAGAAAATGGTCAATGGTGGTAGAGTCGGCCACTGGGCATGTATTAACTTCTCTCGGAATGTTCAAGATAATGCTGCCAAGGTTTTCTGTCATGAGTTGGCTATAATGTGCCAAATATCTGGAATGAACTTTGCACCTGAACCTGTGCTGCCCGTACTTAGTGCGAGGCCTGAACACGTGGAAAGAGCACTGAAGGCACGCTATCATGATGCCATGAACGCAAGCAAACCCCCGGGCAAAGAACTTGACCTGCTAATTGTTATACTGCCAGATAATAATGGTTCTCTTTATGGGGACCTTAAAGGAATTTGTGAGACTGAACTTGGATTGGTATCCCAGTGTTGTCTTACAAAACATGTTTTTAAGATGAGCAAGCAGTATCTTGCAAATGTAGCTCTCAAAATCAATGTTAGGGTGGGGGGAAGGAATACTGTTCTTGTGGATGCTTTGGCAAGGAGGATTCGCCTTGTTACCGACAGACCGACCATAATATTTGGTGCTGATGTTACACATCCTCACCCTGGAGAAGATTCTAGCCCTTCCATTGCAGCTGTGGTTGCTTCTCAAGACTGGCCTGAGATAACCAAGTACGCAGGATTAGTGAGTGCCCAAGCCCATAGGCAAGAGCTGATACAGGATCTTTTTAAAGTATGGCAAGATCCCCAAAGAGGAACTGTTACTGGCGGCATGATCAAGGAGCTTCTCATATCTTTCAAGAGGGCAACTGGACAGAAACCTCAGAGAATCATATTTTACAGGGATGGTGTCAGTGAGGGACAGTTCTATCAAGTTCTGTTGTTTGAACTTGATGCCATTCGTAAGGCCTGTGCATCCTTGGAGCCCAATTATCAGCCTCCAGTTACCTTTGTGGTTGTCCAGAAGCGTCATCACACCAGGCTTTTCGCTAACAATCACAATGATCAGCGTACTGTTGATAGAAGCGGGAACATACTGCCTGGCACCGTTGTTGACTCGAAGATCTGCCATCCGACAGAATTCGATTTCTACTTGTGCAGCCATGCTGGCATTCAGGGAACAAGCCGGCCTGCTCATTATCATGTTCTGTGGGACGAGAACAAATTTACTGCTGATGAGTTGCAAACTCTCACAAACAACTTGTGCTACACATATGCTCGATGCACCCGCTCCGTATCAATTGTTCCTCCCGCATATTATGCACATCTGGCAGCCTTCCGGGCTCGGTTCTACATGGAGCCGGACACCTCTGACAGCGGGTCCGTGGCTAGCGGTGCACGTGGTGGTCCTCCACAGGGCGGTCCACGCAGCAGCACCAGGTTCGGGAATGTTGCTGTCAGGCCTCTCCCTGCCCTCAAGGAAAACGTCAAGCGCGTCATGTTTTACTGCTAGATAGGATCCTGGTGGTTACCGTGAGGCTACTTGAAGCACCTGCGAGAGTAGTATCAAATATTAGTATTGGTGATGCTGTTCAACACCATTATGCAAACCTATATCGAAGTATCTGTTGTACTCTGTTTTATTGCTTGCCTAGGGTATTCTAAGTACTTGCACCGGATTGGCGATTGGTGCACAAACCTTTTAAGCTATTTGACTGGATTGGGTGTAAATTATATGTGGTGCTGCGAGAAGCTTTTGCTTTCGCGGCTGTGCATGGCCATCTACATTTGTATAACTGGTGTTTAAAATATTTATGAACCTGTGTCATGGAATCACTTGCTGGCAAAAAAAAAAA
CDS Sequence
- >JQ805149
ATGGGTAAATGTGGGGATAGGTGTGTGGTGAAAGCCAATCATTTCTTCGCGGAGCTCCCTGATAAAGACCTTCACCAATACGATGTGACCATAACGCCAGAGGTTACATCGCGAGGTGTTAATCGTGCTGTGATTGCAGAACTTGTAAAGCTGTATAGACAATCTCATATGAATGGACGTCTACCTGCCTATGATGGAAGGAAGAGCCTTTATACAGCTGGGCCATTACCATTTACTTCGAGGACATTTGAAATCGCTCTGCAAGATGAAGATGAAGGCCTTGTTGGTGGGCAAGCCACGCCAAGGCGTGAGAGACAATTCAGGGTGGTGATCAAATATGCTGCCCGTGCTGATCTCCATCATTTGGCTATGTTTCTAGCCGGGAGGCAACCAGATGCACCTCAAGAAGCTCTTCAGGTGCTTGACATTGTGCTACGGGAATTGCCTACTGCCAGGTATTCCCCAGTTAGTAGATCATTTTATTCTCCCAACCTAGGGAGACGTCAGAGACTTGGGGACGGTTTGGAAAGTTGGCGTGGATTTTACCAGAGTATAAGACCTACGCAGATGGGGCTTTCGCTGAATATTGATATGTCTTCTACAGCATTTATCGAGCCTCTCCCTGTGATTGAGTTTGTTGCTCAGCTTCTGTGCAGAGACATCTCAGTTAGACCGCCCACTGATTCAGATCGTGTGAAGATTAAAAAAGCCCTACGAGGTGTAAAGGTTGAGGTTACACATCGAGGAAACATGCGTAGGAAATACCGTATATCTGGCCTCACATCACAAGCAACACGAGAGCTATCATTCCCTGTTGATGATCGTGGTACTGTTAAGACTGTGGTGCAATACTTCCTGGAGACGTATGGTTTCAATATTCAGCACACCACTTTACCTTGCTTGCAAGTCGGTAATCAGCAAAGGCCGAATTATCTCCCCGTGGAGGTTTGTAAGATTGTTGAAGGACAACGCTACTCAAAACGACTGAATGAAAAACAAATAACTGCTCTACTGAAAGTGACTTGCCAGCGCCCTCAAGAGCGTGAGAAGGACATCTTGCAGACTGTGCATCACAATGCATACTATGAAGATCCATATGCACAGGAATTTGGCATAAAAATAGATGAGCAACTTGCATCGGCTGAAGCTCGTGTTCTGCCTCCGCCAAGGCTTAAGTACCATGATAGTGGCAGAGAGAAGGATGTCTTACCCAGGGTCGGCCAATGGAACATGATGAACAAGAAAATGGTCAATGGTGGTAGAGTCGGCCACTGGGCATGTATTAACTTCTCTCGGAATGTTCAAGATAATGCTGCCAAGGTTTTCTGTCATGAGTTGGCTATAATGTGCCAAATATCTGGAATGAACTTTGCACCTGAACCTGTGCTGCCCGTACTTAGTGCGAGGCCTGAACACGTGGAAAGAGCACTGAAGGCACGCTATCATGATGCCATGAACGCAAGCAAACCCCCGGGCAAAGAACTTGACCTGCTAATTGTTATACTGCCAGATAATAATGGTTCTCTTTATGGGGACCTTAAAGGAATTTGTGAGACTGAACTTGGATTGGTATCCCAGTGTTGTCTTACAAAACATGTTTTTAAGATGAGCAAGCAGTATCTTGCAAATGTAGCTCTCAAAATCAATGTTAGGGTGGGGGGAAGGAATACTGTTCTTGTGGATGCTTTGGCAAGGAGGATTCGCCTTGTTACCGACAGACCGACCATAATATTTGGTGCTGATGTTACACATCCTCACCCTGGAGAAGATTCTAGCCCTTCCATTGCAGCTGTGGTTGCTTCTCAAGACTGGCCTGAGATAACCAAGTACGCAGGATTAGTGAGTGCCCAAGCCCATAGGCAAGAGCTGATACAGGATCTTTTTAAAGTATGGCAAGATCCCCAAAGAGGAACTGTTACTGGCGGCATGATCAAGGAGCTTCTCATATCTTTCAAGAGGGCAACTGGACAGAAACCTCAGAGAATCATATTTTACAGGGATGGTGTCAGTGAGGGACAGTTCTATCAAGTTCTGTTGTTTGAACTTGATGCCATTCGTAAGGCCTGTGCATCCTTGGAGCCCAATTATCAGCCTCCAGTTACCTTTGTGGTTGTCCAGAAGCGTCATCACACCAGGCTTTTCGCTAACAATCACAATGATCAGCGTACTGTTGATAGAAGCGGGAACATACTGCCTGGCACCGTTGTTGACTCGAAGATCTGCCATCCGACAGAATTCGATTTCTACTTGTGCAGCCATGCTGGCATTCAGGGAACAAGCCGGCCTGCTCATTATCATGTTCTGTGGGACGAGAACAAATTTACTGCTGATGAGTTGCAAACTCTCACAAACAACTTGTGCTACACATATGCTCGATGCACCCGCTCCGTATCAATTGTTCCTCCCGCATATTATGCACATCTGGCAGCCTTCCGGGCTCGGTTCTACATGGAGCCGGACACCTCTGACAGCGGGTCCGTGGCTAGCGGTGCACGTGGTGGTCCTCCACAGGGCGGTCCACGCAGCAGCACCAGGTTCGGGAATGTTGCTGTCAGGCCTCTCCCTGCCCTCAAGGAAAACGTCAAGCGCGTCATGTTTTACTGCTAG
Protein Sequence
- >JQ805149
MGKCGDRCVVKANHFFAELPDKDLHQYDVTITPEVTSRGVNRAVIAELVKLYRQSHMNGRLPAYDGRKSLYTAGPLPFTSRTFEIALQDEDEGLVGGQATPRRERQFRVVIKYAARADLHHLAMFLAGRQPDAPQEALQVLDIVLRELPTARYSPVSRSFYSPNLGRRQRLGDGLESWRGFYQSIRPTQMGLSLNIDMSSTAFIEPLPVIEFVAQLLCRDISVRPPTDSDRVKIKKALRGVKVEVTHRGNMRRKYRISGLTSQATRELSFPVDDRGTVKTVVQYFLETYGFNIQHTTLPCLQVGNQQRPNYLPVEVCKIVEGQRYSKRLNEKQITALLKVTCQRPQEREKDILQTVHHNAYYEDPYAQEFGIKIDEQLASAEARVLPPPRLKYHDSGREKDVLPRVGQWNMMNKKMVNGGRVGHWACINFSRNVQDNAAKVFCHELAIMCQISGMNFAPEPVLPVLSARPEHVERALKARYHDAMNASKPPGKELDLLIVILPDNNGSLYGDLKGICETELGLVSQCCLTKHVFKMSKQYLANVALKINVRVGGRNTVLVDALARRIRLVTDRPTIIFGADVTHPHPGEDSSPSIAAVVASQDWPEITKYAGLVSAQAHRQELIQDLFKVWQDPQRGTVTGGMIKELLISFKRATGQKPQRIIFYRDGVSEGQFYQVLLFELDAIRKACASLEPNYQPPVTFVVVQKRHHTRLFANNHNDQRTVDRSGNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENKFTADELQTLTNNLCYTYARCTRSVSIVPPAYYAHLAAFRARFYMEPDTSDSGSVASGARGGPPQGGPRSSTRFGNVAVRPLPALKENVKRVMFYC