Information report for Snn1
Gene Details
|
|
Functional Descriptions
- The wheat Snn1 gene confers susceptibility to strains of the necrotrophic pathogen Parastagonospora nodorum that produce the SnTox1 protein.
- We report the positional cloning of Snn1, a member of the wall-associated kinase class of receptors, which are known to drive pathways for biotrophic pathogen resistance.
- We cloned and characterized Snn1 to gain a better understanding of the mechanisms of susceptibility operating in plant–necrotrophic pathogen interactions.
- Recognition of SnTox1 by Snn1 activates programmed cell death, which allows this necrotroph to gain nutrients and sporulate.
Functional Keywords
Literature and News
Gene Resources
- NCBI ID: 123083165
- UniProt accessions: W5AB81
- EMBL: KP085710 , KP085717 , KP091701 , MN908622 , MN908625
- EnsemblPlants: TraesCS1B02G004100.1
- Gramene: TraesCS1B02G004100.1
- GO: GO:0004674 , GO:0005509 , GO:0005524 , GO:0005886 , GO:0007166 , GO:0030247 , GO:0038023
- OMA: SCANSTH
- InterPro: IPR000152 , IPR000719 , IPR000742 , IPR001881
- PANTHER: PTHR27005 , PTHR27005:SF497
- SUPFAM: SSF56112 , SSF57196
- PROSITE: PS00010 , PS00107 , PS00108 , PS01187 , PS50011 , PS50026
- Gene3D: 1.10.510.10 , 2.10.25.10 , 3.30.200.20
- SMR: W5AB81
- CDD: cd00054
Sequences
cDNA Sequence
- >TraesCS1B02G004100.1
ATGAGCACCCCAAATTCCCAATTCCATTCCCACCCACTACTGCGGCTGTGGTTGCCAGTAATCCAACTAGTCATCTTGGCCGCCGCGGCTGAGCAGCAGCAAGGTTGCCGTGACAAGTGCGGCCACATCAGCATCCCCTTCCCTTTCGGCATCGGCCGCGGCTGCTTCCGCCATGGCTTCGAGGTCGTGTGCAACGACTCCTCGTATCCCCCTCGCGCCTTCCTTGCTGGCAAAAGAATATCCAGGTTGTCGTCGTCCCCACTGGATCCCGAGAACGGGAGCGATTGGTCCTTCTCGTCGATCGAGCTTGTGAGCATATCAGTCGCCACGGGCAAGGCACGGGTGTACGCCCCGGTCTCGTACCTCTGCAGCACAAATCTCAACAGGACCTTCTCCGCGATCTACAATATTCACTTGGCCCACACGCCGTTCGCCGTGTCGGCGACGCGCAATATTCTCGTCGGCGTCGGCTGGAGAGTCGATGCTTTCGTGACTTTCATCGACTTTCCGCTGAGGTGGCCGTATACGGTCATGTTCGCCTGCAGTGCTCGTGCACGCAATCTCCTGCCAAGTGTGACCCCAACAAACGGGTCGTGCACGGGGAGGGGCTGCTGCCACACCACCATCCCACCGGACAACAACCTCGGCAACTTGTTAAGCTTTTCTGTCAAGGGCGAGGTCCCCAACGAGCGGTGGGAAGACTACCCGTGCTCCTACGCCATGCTGGTGGACAAGTCATGGTACAACTTCTCTACGCCAGACATGGAGGGCAACAGGACGCTACTCAAAAGGTTCCCCCGGGGCGTCCACATCGCGCTCGATTTCGCCGCCGGGAACACTTCGTGTCCGGCCAAGGGACAGCCACCCCCTCCGGACTACGCCTGCATCAGCGGCAACAGCTCTTGCGCCAACTCAACACATACTCCTGGCTATATCTGCAAGTGCTGGGACCATTACGCTGGCAACCCTTACATCACTCACGGATGCCAAGATATTGATGAATGCAAGCTCCCGCATGTGTATCCCTGCTCAAATGGCGGGATCTGCAAAAACAGGCTCGGAGGCTATGACTGTCCATGCAAGTTCGGGATGAAAGGCGACGGCAAAGCGGGAACCTGCTCAGATATATTCACTCCAGCGGCCAAGGCGGCTGTGGGTGCCATTGGCGGTATTCTTCTGATGGCTGTTTTATCATTTCTTCTTATTCTTCACAAAGAGAAAAAGAAGACGGAAGAATTCTACAAAAAGAATGGTGGCCCTACATTAGAGAAGGCAGATGTCATTAAACTTTTCAAAAAGGGGGAGCTCAAGCCAATTTTGAGGAGTAGTAACTTAATTGGAAAAGGTTACTTTGGTGAAGTTTACAAGGGCCTTCTTGACAATAAATTAGTTGCAATAAAGAAGCCGATTAATGGTAGTGTGCTAGAGAGTGAACAATTTGCAAATGAAGTCATCATCCAATCTAGAGTCATTCACAAGAACATTGTCAGGCTCATTGGTTGTTGCCTTGAAGTTGATGCCCCTATGCTGGTCTACGAGTTTATCTCTCAAGGTAGCCTCCTTGACATCCTTCACAACAGTAATAACAAGGTGGCCCTCAACTTGGATACACGTTTAAGTATTGCAGCACAATCAGCGGACGGTCTAGCTTATATGCACTCAAAAACAAATAGTACAATTCTACATGGTGATGTTAAACCAGCAAATATACTCCTGGATGATAACTTTGTTCCCAAGATTTCAGACTTCGGCATATCTAAGTTGATTCAGAGAGACAAGCAACACACTGGACAAGTCATCGGCGACATGAATTATATGGATCCAGTATATCTACAAGAAGGCCGACTCACTGAAAAAAGTGATGTCTATAGTTTCGGAATTGTGATCCTAGAGCTTATTAGTAGGAGGAGGGCCATACATTCTGAGAATAATAGCTTGGTAAAAGGCTTTCTTGAAGCACATAAGAAACAGAAGAAAACGACTGAGTTTTATGACAAGGAAATTGCAATAACAAAAGATTTGGAGCTTCTTGATAGTCTGGCAGATATAGTCGTGGAATGCCTTAGCCTTGATGTAGACCAAAGACCAACGATGATGGAGGTAGCGGAGCAACTGCTCGTACTAGGCCGGTCTCGTAAAGCGTAG
CDS Sequence
- >TraesCS1B02G004100.1
ATGAGCACCCCAAATTCCCAATTCCATTCCCACCCACTACTGCGGCTGTGGTTGCCAGTAATCCAACTAGTCATCTTGGCCGCCGCGGCTGAGCAGCAGCAAGGTTGCCGTGACAAGTGCGGCCACATCAGCATCCCCTTCCCTTTCGGCATCGGCCGCGGCTGCTTCCGCCATGGCTTCGAGGTCGTGTGCAACGACTCCTCGTATCCCCCTCGCGCCTTCCTTGCTGGCAAAAGAATATCCAGGTTGTCGTCGTCCCCACTGGATCCCGAGAACGGGAGCGATTGGTCCTTCTCGTCGATCGAGCTTGTGAGCATATCAGTCGCCACGGGCAAGGCACGGGTGTACGCCCCGGTCTCGTACCTCTGCAGCACAAATCTCAACAGGACCTTCTCCGCGATCTACAATATTCACTTGGCCCACACGCCGTTCGCCGTGTCGGCGACGCGCAATATTCTCGTCGGCGTCGGCTGGAGAGTCGATGCTTTCGTGACTTTCATCGACTTTCCGCTGAGGTGGCCGTATACGGTCATGTTCGCCTGCAGTGCTCGTGCACGCAATCTCCTGCCAAGTGTGACCCCAACAAACGGGTCGTGCACGGGGAGGGGCTGCTGCCACACCACCATCCCACCGGACAACAACCTCGGCAACTTGTTAAGCTTTTCTGTCAAGGGCGAGGTCCCCAACGAGCGGTGGGAAGACTACCCGTGCTCCTACGCCATGCTGGTGGACAAGTCATGGTACAACTTCTCTACGCCAGACATGGAGGGCAACAGGACGCTACTCAAAAGGTTCCCCCGGGGCGTCCACATCGCGCTCGATTTCGCCGCCGGGAACACTTCGTGTCCGGCCAAGGGACAGCCACCCCCTCCGGACTACGCCTGCATCAGCGGCAACAGCTCTTGCGCCAACTCAACACATACTCCTGGCTATATCTGCAAGTGCTGGGACCATTACGCTGGCAACCCTTACATCACTCACGGATGCCAAGATATTGATGAATGCAAGCTCCCGCATGTGTATCCCTGCTCAAATGGCGGGATCTGCAAAAACAGGCTCGGAGGCTATGACTGTCCATGCAAGTTCGGGATGAAAGGCGACGGCAAAGCGGGAACCTGCTCAGATATATTCACTCCAGCGGCCAAGGCGGCTGTGGGTGCCATTGGCGGTATTCTTCTGATGGCTGTTTTATCATTTCTTCTTATTCTTCACAAAGAGAAAAAGAAGACGGAAGAATTCTACAAAAAGAATGGTGGCCCTACATTAGAGAAGGCAGATGTCATTAAACTTTTCAAAAAGGGGGAGCTCAAGCCAATTTTGAGGAGTAGTAACTTAATTGGAAAAGGTTACTTTGGTGAAGTTTACAAGGGCCTTCTTGACAATAAATTAGTTGCAATAAAGAAGCCGATTAATGGTAGTGTGCTAGAGAGTGAACAATTTGCAAATGAAGTCATCATCCAATCTAGAGTCATTCACAAGAACATTGTCAGGCTCATTGGTTGTTGCCTTGAAGTTGATGCCCCTATGCTGGTCTACGAGTTTATCTCTCAAGGTAGCCTCCTTGACATCCTTCACAACAGTAATAACAAGGTGGCCCTCAACTTGGATACACGTTTAAGTATTGCAGCACAATCAGCGGACGGTCTAGCTTATATGCACTCAAAAACAAATAGTACAATTCTACATGGTGATGTTAAACCAGCAAATATACTCCTGGATGATAACTTTGTTCCCAAGATTTCAGACTTCGGCATATCTAAGTTGATTCAGAGAGACAAGCAACACACTGGACAAGTCATCGGCGACATGAATTATATGGATCCAGTATATCTACAAGAAGGCCGACTCACTGAAAAAAGTGATGTCTATAGTTTCGGAATTGTGATCCTAGAGCTTATTAGTAGGAGGAGGGCCATACATTCTGAGAATAATAGCTTGGTAAAAGGCTTTCTTGAAGCACATAAGAAACAGAAGAAAACGACTGAGTTTTATGACAAGGAAATTGCAATAACAAAAGATTTGGAGCTTCTTGATAGTCTGGCAGATATAGTCGTGGAATGCCTTAGCCTTGATGTAGACCAAAGACCAACGATGATGGAGGTAGCGGAGCAACTGCTCGTACTAGGCCGGTCTCGTAAAGCGTAG
Protein Sequence
- >TraesCS1B02G004100.1
MSTPNSQFHSHPLLRLWLPVIQLVILAAAAEQQQGCRDKCGHISIPFPFGIGRGCFRHGFEVVCNDSSYPPRAFLAGKRISRLSSSPLDPENGSDWSFSSIELVSISVATGKARVYAPVSYLCSTNLNRTFSAIYNIHLAHTPFAVSATRNILVGVGWRVDAFVTFIDFPLRWPYTVMFACSARARNLLPSVTPTNGSCTGRGCCHTTIPPDNNLGNLLSFSVKGEVPNERWEDYPCSYAMLVDKSWYNFSTPDMEGNRTLLKRFPRGVHIALDFAAGNTSCPAKGQPPPPDYACISGNSSCANSTHTPGYICKCWDHYAGNPYITHGCQDIDECKLPHVYPCSNGGICKNRLGGYDCPCKFGMKGDGKAGTCSDIFTPAAKAAVGAIGGILLMAVLSFLLILHKEKKKTEEFYKKNGGPTLEKADVIKLFKKGELKPILRSSNLIGKGYFGEVYKGLLDNKLVAIKKPINGSVLESEQFANEVIIQSRVIHKNIVRLIGCCLEVDAPMLVYEFISQGSLLDILHNSNNKVALNLDTRLSIAAQSADGLAYMHSKTNSTILHGDVKPANILLDDNFVPKISDFGISKLIQRDKQHTGQVIGDMNYMDPVYLQEGRLTEKSDVYSFGIVILELISRRRAIHSENNSLVKGFLEAHKKQKKTTEFYDKEIAITKDLELLDSLADIVVECLSLDVDQRPTMMEVAEQLLVLGRSRKA