Gene Details:

Functional Descriptions:

  • Rht23 confers the free-threshing character and influences many other agronomically important traits.
  • Rht23 (5Dq′) likely encodes a Q homeologue with pleiotropic effects on plant height and spike compactness.
  • The mutant(Rht23) exhibits compact spike and dwarfness, and the mutated locus Rht23 was mapped to the distal of the long arm of chromosome 5D, where 5Dq was located.
  • We proposed that a mutation within the miR172 target site in the 5Dq led to the dwarf and compact spike phenotype of the Rht23 mutant.

Literature:

Gene Resources:

Sequences:

cDNA Sequence
  • >TraesCS5D02G486600.2
    CTCCCATGCCATAGACGCGACCCCACTCATCGGTCGAGGTCGGTCGCTCCGAGGCGAGCGGCGGCGGGAGAGGCGGTGGGTCAAGCGAGTTTCGGAGGCGCCCGGCGGGCCTCGGATCGGAGATGGTGCTGGATCTCAATGTCGAGTCGCCGGCGGACTCCGGCACGTCCAGCTCGTCCGTGCTCAACTCCGCGGACGCCGGCGGCGGCGGCGGCTTCAGGTTCGGCCTGCTCGGGAGCCCCGATGATGACGACTGCTCCGGCGAGCCGGCGCCGGTCGGGTCCGGGTTCGTGACGAGGCAGCTCTTCCCCGCGTCGCCGCCCGGTCACGCGGGCGCGCCCGGGATGATGACGGGGCAGCTGGCACCGGCGCCGCCGATGGCCCCCGTGTGGCAGCCGCGGCGCGCCGAGGAGCTCGTGATGGCGCAGCGGGTGGCGCCCGCGAAGAAGACGCGGCGGGGGCCGAGGTCGCGGAGCTCGCAGTACAGGGGCGTCACCTTCTACCGCAGGACCGGCCGGTGGGAGTCGCACATCTGGGACTGCGGGAAGCAGGTCTACTTAGGTGGTTTCGACACTGCGCACGCGGCCGCAAGGGCCTACGATCGCGCGGCGATCAAGTTCCGGGGGCTGGAGGCCGACATCAACTTCAATCTGAGCGATTATGAGGAGGATTTGAAGCAGATGAGGAACTGGACCAAGGAGGAGTTCGTGCACATCCTCCGCCGCCAGAGCACGGGGTTCGCCAGGGGGAGCTCCAAGTACCGCGGCGTCACGCTCCACAAGTGCGGCCGCTGGGAGGCAAGGATGGGCCAGCTGCTCGGCAAGAAGTACATATATCTTGGCCTCTTTGACAGCGAAGTTGAAGCTGCAAGGGCGTACGACAGGGCGGCGATTCGCTTCAATGGGAGGGAAGCTGTGACTAACTTTGAGAGCAGCTCCTACAATGGGGATGCTCCACCCGACGCCGAAAATGAGGCAATTGTTGATGCTGATGCTCTTGACTTGGATCTACGGATGTCGCAACCTACCGCGCACGATCCCAAGCGGGACAACATCATCGCCGGCCTTCAGTTAACTTTTGATTCCCCTGAATCGTCAACCACAATGCTCTCTTCTCAGCCAATGAGCTCATCTTCTTCCCAGTGGCCTGTGCATCAACATGGCACGGCAGTAGCACCTCAGCAGCACCAGCGTTTGTACCCATCTGCTTGTCATGGCTTCTACCCGAACGTACAGGTGCAGGTGCAGGTGCAGGAGAGGCCCATGGAGCCAAGGCCCCCTGAGCCGCCGTCGTGCTTCCCCAGCTGGGGGTGGCAAGCGCAAGCCATGCCGCCGGGCTCCTCCCACTCGCCGTTGCTTTACGCTGCAGCATCATCAGGATTCTCTACCGCCGCCGGCGCGCACCCCGCCCCGCCGCCGCCGCCGTCGTACCCGGATCACCACCGGTTCTACTTCCCCCGCCCGCCGGACAACTAGCTCTCTCTCTCTCTCTCTCTGCTTGCTCGGCCATGGACGGTGGCCGACGAGCTTGTGTGTGTTGGAGGTGCTCCCGCCTCGTCGGTAACAGTTGTTGTGAATTAATCGGAGAGAGACACACGTTGCCAGGCCATGTGTGAGTGTGACTGGCTGAGGCTGGTTTCTCTCCGCGTCGGCGTCGCCATGATCAGGATCACGGGCATCATGGCTGCTCGTTATTAGATTCTCATGTATCCATTGCTCACGTTTTCCAAACAGTTGAAAAAACTTGGAAATTGTT
  • >TraesCS5D02G486600.1
    CTCCCATGCCATAGACGCGACCCCACTCATCGGTCGAGGTCGGTCGCTCCGAGGCGAGCGGCGGCGGGAGAGGCGGTGGGTCAAGCGAGTTTCGGAGGCGCCCGGCGGGCCTCGGATCGGAGATGGTGCTGGATCTCAATGTCGAGTCGCCGGCGGACTCCGGCACGTCCAGCTCGTCCGTGCTCAACTCCGCGGACGCCGGCGGCGGCGGCGGCTTCAGGTTCGGCCTGCTCGGGAGCCCCGATGATGACGACTGCTCCGGCGAGCCGGCGCCGGTCGGGTCCGGGTTCGTGACGAGGCAGCTCTTCCCCGCGTCGCCGCCCGGTCACGCGGGCGCGCCCGGGATGATGACGGGGCAGCTGGCACCGGCGCCGCCGATGGCCCCCGTGTGGCAGCCGCGGCGCGCCGAGGAGCTCGTGATGGCGCAGCGGGTGGCGCCCGCGAAGAAGACGCGGCGGGGGCCGAGGTCGCGGAGCTCGCAGTACAGGGGCGTCACCTTCTACCGCAGGACCGGCCGGTGGGAGTCGCACATCTGGGACTGCGGGAAGCAGGTCTACTTAGGTGGTTTCGACACTGCGCACGCGGCCGCAAGGGCCTACGATCGCGCGGCGATCAAGTTCCGGGGGCTGGAGGCCGACATCAACTTCAATCTGAGCGATTATGAGGAGGATTTGAAGCAGATGAGGAACTGGACCAAGGAGGAGTTCGTGCACATCCTCCGCCGCCAGAGCACGGGGTTCGCCAGGGGGAGCTCCAAGTACCGCGGCGTCACGCTCCACAAGTGCGGCCGCTGGGAGGCAAGGATGGGCCAGCTGCTCGGCAAGAAGTACATATATCTTGGCCTCTTTGACAGCGAAGTTGAAGCTGCAAGGGCGTACGACAGGGCGGCGATTCGCTTCAATGGGAGGGAAGCTGTGACTAACTTTGAGAGCAGCTCCTACAATGGGGATGCTCCACCCGACGCCGAAAATGAGGCAATTGTTGATGCTGATGCTCTTGACTTGGATCTACGGATGTCGCAACCTACCGCGCACGATCCCAAGCGGGACAACATCATCGCCGGCCTTCAGTTAACTTTTGATTCCCCTGAATCGTCAACCACAATGCTCTCTTCTCAGCCAATGAGCTCATCTTCTTCCCAGTGGCCTGTGCATCAACATGGCACGGCAGTAGCACCTCAGCAGCACCAGCGTTTGTACCCATCTGCTTGTCATGGCTTCTACCCGAACGTACAGGTGCAGGTGCAGGTGCAGGAGAGGCCCATGGAGCCAAGGCCCCCTGAGCCGCCGTCGTGCTTCCCCAGCTGGGGGTGGCAAGCGCAAGCCATGCCGCCGGGCTCCTCCCACTCGCCGTTGCTTTACGCTGCAGCATCATCAGGATTCTCTACCGCCGCCGGCGCGCACCCCGCCCCGCCGCCGCCGCCGTCGTACCCGGATCACCACCGGTTCTACTTCCCCCGCCCGCCGGACAACTAGCTCTCTCTCTCTCTCTCTCTGCTTGCTCGGCCATGGACGGTGGCCGACGAGCTTGTGTGTGTTGGAGGTGCTCCCGCCTCGTCGGTAACAGTTGTTGTGAATTAATCGGAGAGAGACACACGTTGCCAGGCCATGTGTGAGTGTGACTGGCTGAGGCTGGTTTCTCTCCGCGTCGGCGTCGCCATGATCAGGATCACGGGCATCATGGCTGCTCGTTATTAGATTCTCATGTATCCATTGCTCACGTTTTCCAAACAGTTGAAAAAACTTGGAAATTGTT
CDS Sequence
  • >TraesCS5D02G486600.2
    ATGGTGCTGGATCTCAATGTCGAGTCGCCGGCGGACTCCGGCACGTCCAGCTCGTCCGTGCTCAACTCCGCGGACGCCGGCGGCGGCGGCGGCTTCAGGTTCGGCCTGCTCGGGAGCCCCGATGATGACGACTGCTCCGGCGAGCCGGCGCCGGTCGGGTCCGGGTTCGTGACGAGGCAGCTCTTCCCCGCGTCGCCGCCCGGTCACGCGGGCGCGCCCGGGATGATGACGGGGCAGCTGGCACCGGCGCCGCCGATGGCCCCCGTGTGGCAGCCGCGGCGCGCCGAGGAGCTCGTGATGGCGCAGCGGGTGGCGCCCGCGAAGAAGACGCGGCGGGGGCCGAGGTCGCGGAGCTCGCAGTACAGGGGCGTCACCTTCTACCGCAGGACCGGCCGGTGGGAGTCGCACATCTGGGACTGCGGGAAGCAGGTCTACTTAGGTGGTTTCGACACTGCGCACGCGGCCGCAAGGGCCTACGATCGCGCGGCGATCAAGTTCCGGGGGCTGGAGGCCGACATCAACTTCAATCTGAGCGATTATGAGGAGGATTTGAAGCAGATGAGGAACTGGACCAAGGAGGAGTTCGTGCACATCCTCCGCCGCCAGAGCACGGGGTTCGCCAGGGGGAGCTCCAAGTACCGCGGCGTCACGCTCCACAAGTGCGGCCGCTGGGAGGCAAGGATGGGCCAGCTGCTCGGCAAGAAGTACATATATCTTGGCCTCTTTGACAGCGAAGTTGAAGCTGCAAGGGCGTACGACAGGGCGGCGATTCGCTTCAATGGGAGGGAAGCTGTGACTAACTTTGAGAGCAGCTCCTACAATGGGGATGCTCCACCCGACGCCGAAAATGAGGCAATTGTTGATGCTGATGCTCTTGACTTGGATCTACGGATGTCGCAACCTACCGCGCACGATCCCAAGCGGGACAACATCATCGCCGGCCTTCAGTTAACTTTTGATTCCCCTGAATCGTCAACCACAATGCTCTCTTCTCAGCCAATGAGCTCATCTTCTTCCCAGTGGCCTGTGCATCAACATGGCACGGCAGTAGCACCTCAGCAGCACCAGCGTTTGTACCCATCTGCTTGTCATGGCTTCTACCCGAACGTACAGGTGCAGGTGCAGGTGCAGGAGAGGCCCATGGAGCCAAGGCCCCCTGAGCCGCCGTCGTGCTTCCCCAGCTGGGGGTGGCAAGCGCAAGCCATGCCGCCGGGCTCCTCCCACTCGCCGTTGCTTTACGCTGCAGCATCATCAGGATTCTCTACCGCCGCCGGCGCGCACCCCGCCCCGCCGCCGCCGCCGTCGTACCCGGATCACCACCGGTTCTACTTCCCCCGCCCGCCGGACAACTAG
  • >TraesCS5D02G486600.1
    ATGGTGCTGGATCTCAATGTCGAGTCGCCGGCGGACTCCGGCACGTCCAGCTCGTCCGTGCTCAACTCCGCGGACGCCGGCGGCGGCGGCGGCTTCAGGTTCGGCCTGCTCGGGAGCCCCGATGATGACGACTGCTCCGGCGAGCCGGCGCCGGTCGGGTCCGGGTTCGTGACGAGGCAGCTCTTCCCCGCGTCGCCGCCCGGTCACGCGGGCGCGCCCGGGATGATGACGGGGCAGCTGGCACCGGCGCCGCCGATGGCCCCCGTGTGGCAGCCGCGGCGCGCCGAGGAGCTCGTGATGGCGCAGCGGGTGGCGCCCGCGAAGAAGACGCGGCGGGGGCCGAGGTCGCGGAGCTCGCAGTACAGGGGCGTCACCTTCTACCGCAGGACCGGCCGGTGGGAGTCGCACATCTGGGACTGCGGGAAGCAGGTCTACTTAGGTGGTTTCGACACTGCGCACGCGGCCGCAAGGGCCTACGATCGCGCGGCGATCAAGTTCCGGGGGCTGGAGGCCGACATCAACTTCAATCTGAGCGATTATGAGGAGGATTTGAAGCAGATGAGGAACTGGACCAAGGAGGAGTTCGTGCACATCCTCCGCCGCCAGAGCACGGGGTTCGCCAGGGGGAGCTCCAAGTACCGCGGCGTCACGCTCCACAAGTGCGGCCGCTGGGAGGCAAGGATGGGCCAGCTGCTCGGCAAGAAGTACATATATCTTGGCCTCTTTGACAGCGAAGTTGAAGCTGCAAGGGCGTACGACAGGGCGGCGATTCGCTTCAATGGGAGGGAAGCTGTGACTAACTTTGAGAGCAGCTCCTACAATGGGGATGCTCCACCCGACGCCGAAAATGAGGCAATTGTTGATGCTGATGCTCTTGACTTGGATCTACGGATGTCGCAACCTACCGCGCACGATCCCAAGCGGGACAACATCATCGCCGGCCTTCAGTTAACTTTTGATTCCCCTGAATCGTCAACCACAATGCTCTCTTCTCAGCCAATGAGCTCATCTTCTTCCCAGTGGCCTGTGCATCAACATGGCACGGCAGTAGCACCTCAGCAGCACCAGCGTTTGTACCCATCTGCTTGTCATGGCTTCTACCCGAACGTACAGGTGCAGGTGCAGGTGCAGGAGAGGCCCATGGAGCCAAGGCCCCCTGAGCCGCCGTCGTGCTTCCCCAGCTGGGGGTGGCAAGCGCAAGCCATGCCGCCGGGCTCCTCCCACTCGCCGTTGCTTTACGCTGCAGCATCATCAGGATTCTCTACCGCCGCCGGCGCGCACCCCGCCCCGCCGCCGCCGCCGTCGTACCCGGATCACCACCGGTTCTACTTCCCCCGCCCGCCGGACAACTAG
Protein Sequence
  • >TraesCS5D02G486600.2
    MVLDLNVESPADSGTSSSSVLNSADAGGGGGFRFGLLGSPDDDDCSGEPAPVGSGFVTRQLFPASPPGHAGAPGMMTGQLAPAPPMAPVWQPRRAEELVMAQRVAPAKKTRRGPRSRSSQYRGVTFYRRTGRWESHIWDCGKQVYLGGFDTAHAAARAYDRAAIKFRGLEADINFNLSDYEEDLKQMRNWTKEEFVHILRRQSTGFARGSSKYRGVTLHKCGRWEARMGQLLGKKYIYLGLFDSEVEAARAYDRAAIRFNGREAVTNFESSSYNGDAPPDAENEAIVDADALDLDLRMSQPTAHDPKRDNIIAGLQLTFDSPESSTTMLSSQPMSSSSSQWPVHQHGTAVAPQQHQRLYPSACHGFYPNVQVQVQVQERPMEPRPPEPPSCFPSWGWQAQAMPPGSSHSPLLYAAASSGFSTAAGAHPAPPPPPSYPDHHRFYFPRPPDN
  • >TraesCS5D02G486600.1
    MVLDLNVESPADSGTSSSSVLNSADAGGGGGFRFGLLGSPDDDDCSGEPAPVGSGFVTRQLFPASPPGHAGAPGMMTGQLAPAPPMAPVWQPRRAEELVMAQRVAPAKKTRRGPRSRSSQYRGVTFYRRTGRWESHIWDCGKQVYLGGFDTAHAAARAYDRAAIKFRGLEADINFNLSDYEEDLKQMRNWTKEEFVHILRRQSTGFARGSSKYRGVTLHKCGRWEARMGQLLGKKYIYLGLFDSEVEAARAYDRAAIRFNGREAVTNFESSSYNGDAPPDAENEAIVDADALDLDLRMSQPTAHDPKRDNIIAGLQLTFDSPESSTTMLSSQPMSSSSSQWPVHQHGTAVAPQQHQRLYPSACHGFYPNVQVQVQVQERPMEPRPPEPPSCFPSWGWQAQAMPPGSSHSPLLYAAASSGFSTAAGAHPAPPPPPSYPDHHRFYFPRPPDN