Information report for Rf3;RFL29b
Gene Details
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Functional Descriptions
- By genetic mapping and comparative sequence analyses, we identify Rf1 and Rf3 candidates that can restore normal pollen production in transgenic wheat plants carrying T-CMS.
- We show that Rf1 and Rf3 bind to the mitochondrial orf279 transcript and induce cleavage, preventing expression of the CMS trait.
- Rf1 and Rf3 genes that restore fertility of wheat plants carrying Triticum timopheevii-type cytoplasmic male sterility (T-CMS)
- Expression of Rf1 and Rf3 candidates in anthers during pollen formation
- Testing the restoring capabilities of Rf1 and Rf3 candidate genes by transgenesis
Functional Keywords
Literature and News
Gene Resources
- NCBI ID: 123104344
- UniProt accessions: A0A3B5YQT0
- EMBL: MT014287
- EnsemblPlants: TraesCS1B02G038500.1
- Gramene: TraesCS1B02G038500.1
- InterPro: IPR002885 , IPR011990 , IPR050872
- PANTHER: PTHR46128 , PTHR46128:SF358
- SUPFAM: SSF81901
- PROSITE: PS51375
- Gene3D: 1.25.40.10
- OrthoDB: A0A3B5YQT0
- SMR: A0A3B5YQT0
Homologs
- Arabidopsis thaliana: AT3G22470, AT1G64100.2
- Arachis hypogaea: arahy.Tifrunner.gnm1.ann1.8Z4KH7, arahy.Tifrunner.gnm1.ann1.KEB86C, arahy.Tifrunner.gnm1.ann1.IGD5ZI, arahy.Tifrunner.gnm1.ann1.P9T7FJ, arahy.Tifrunner.gnm1.ann1.HV5MI3, arahy.Tifrunner.gnm1.ann1.D88Z08
- Daucus carota: DCAR_015659, DCAR_016546
- Oryza sativa: Rf4;PPR782a, Rf1a;Rf5, RF6, Rf1b, YSA, OsWSL4, FGR1;OsNPPR1
Sequences
cDNA Sequence
- >TraesCS1B02G038500.1
GAGTTCGCGACCTACACACCGGCCATGCCCCGCTTCTCCTCCACCACGCCAATGTCGCCACCCCGCCTCCGCCTCCGCCTCCGACTCTGCGCCCGCCACTCCTCCTCCACCTCTCATCCCTCACGCATCTGGGATCCCCACGCCGCCTTCGCCGCCGCGGCACAGCGGGCGAGCTCTGGCACGCTCACTACGGAGGACGCACACCACCTGTTTGACGAATTGCTGCGGCGGGGCAATCCTGTCCAGGAGCGTCCCTTGAATAAATTTCTGGCTGCCCTCGCCCGCGCGCCCGCGTCCGCATCCTGCTGCGATGGCCCCGCCCTGGCAGTCACCCTCTTCGGCCGTTTGTCCCGAGACGTCGGACGACGGGTGGCGCAGCCAAATGTCTTCACCTATGGCGTCCTCATGGACTGCTGCTGCCGCGCTTGCCGCACAGATCTGGTGCTCGCCTTCTTTGGCCGTCTCCTCAAGACGGGCCTGGAGGCAAACCAAGTCGTCTTCAACACCCTCCTCAAGGGCCTTTGCCACACAAAGCGGGCGGATGAGGCTCTGGACGTGCTGCTTCACAGGATGCCTGAGCTGGGCTGCACTCCTAATGTGGTGGCGTATAACACCGTTATCCATGGCTTCTTTAAGGAAGGCCATGTAAGCAAGGCCTGCAATCTGTTCCATGAAATGGCGCAGCAGGGCGTTAAGCCTAATGTGGTGACATATAACTCAGTTATTGATGCGCTGTGCAAGGCCAGAGCCATGGACAAGGCAGAGGTGGTCCTTCGTCAGATGATTGATGATGGTGTTGGACCTGATAATGTGACGTATAGTAGCCTCATCCATGGATATTCCTCTTCAGGCCACTGGAAGGAGGCAGTTAGGGTATTCAAAGAGATGACAAGTCGGAGGGTTACAGCAGATGTGCATACTTACAACATGTTTATGACCTTTCTTTGCAAACATGGAAGAAGCAAAGAAGCTGCAGGAATTTTTGATACCATGGCTATCAAGGGCCTGAAACCTGACAACGTTTCATATGCTATTCGCCTTCATGGGTATGCCACCGAAGGATGCCTAGTTGACATGATCAATCTCTTCAATTCCATGGCAACACACTGCATTCTACCTAACTGTCATATATTCAACATACTGATTAATGCATATGCTAAATCTGGGAAGCTTGATAAGGCTATGCTTATCTTCAATGAAATGCAGAAACAAGGAGTGAGTCCAAATGCAGTCACATATTCAACCGTAATACATGCATTTTGCAAGAAGGGTAGGTTGGATGATGCTGTGATAAAGTTTAATCAGATGATTGATACAGGAGTACGACCGGACGCATCTGTTTATCGTCCCCTAATCCAGGGTTTTTGTACACATGGCGATTTGGTGAAAGCAAAGGAATATGTTACTGAAATGATGAAGAAAGGTATGCCTCCTCCTGATATTATGTTCTTCAGTTCAATCATGCAGAACCTATGCACAGAAGGAAGGGTAACAGAAGCACGGGATATCCTTGACTTGATAGTGCACATTGGTATGAGGCCTAATGTTATCATATTTAATTTGCTGATCGGTGGATACTGCCTAGTCCGCAAGATGGCAGATGCATTGAAAGTATTTGATGATATGGTGTCATATGGTTTAGAACCTTGTAACTTTACGTATGGTATACTTATTAATGGCTATTGCAAAAATAGAAGGATTGATGACGGGCTTATTCTGTTCAAAGAGATGCTGCACAAGGGACTTAAACCTACAACTTTTAATTATAACGTCATACTGGATGGATTATTTCTGGCTGGACAAACTGTTGCTGCAAAAGAGAAGTTTGATGAGATGGTTGAATCTGGAGTAAGTGTGTGCATTGATACATACTCTATAATTCTTGGTGGACTTTGTAGAAATAGCTGCAGTAGCGAAGCGATCACCCTTTTCCGGAAATTAAGCGCAATGAATGTGAAATTTGATATTACAATTGTCAATATCATTATTGGTGCCTTATACAGGGTCGAGAGAAACCAAGAGGCTAAGGATTTGTTTGCTGCTATGCCAGCCAATGGCTTGGTTCCTAATGCTGTTACCTACACCGTAATGATGACAAATCTTATAAAAGAAGGTTCAGTGGAAGAAGCTGACAATCTTTTCTTATCCATGGAGAAGAGCGGCTGTACTGCCAACTCTTGCCTGTTAAATCATATCATCAGAAGGTTACTGGAAAAAGGAGAGATAGTCAAGGCTGGAAATTATATGTCTAAAGTTGATGCAAAGAGCTACTCACTTGAAGCTAAAACTGTTTCGCTGCTGATCTCTCTGTTTTCAAGGAAAGGGAAATATAGAGAACACATCAAATTGCTTCCTACAAAGTATCAGTTTCTGGAAGAAGCAGCCACAGTTGAATAGTTGGTACATGATATCTGAAATTTAATTTGCATCGCTTGCCATGGGTCCGTCTGCTTGTACAAGAAATGCATTTTCTATTTGTAAATAGGAAGTCAGTTTAGAACAAGCCATCAGGATGACGCAAAGAGTACAATTCAGTTGCACCACCAATAAAAAGGCAGAACTAGGGCTGCCAAAACAACACTGAATCAAAACTCAAACAGAAGGAGCAGCAAACTTTTTTTTTTGAAGCTGGACAGTCTGCTAGCCAAACAACTACAGGAGACTGTCAGGCGGGGCATGTAGTGGCTGGCGTCTAAGCGCCTTTGCTTCTTCCACCATCCATGGCTTAGCCTCACACGGAATCGAGTCAACCAATTCCCGTCGGTTTTGGGTGGCTCCCTTGAAGATGCAATTGTTTTCAGCGGCCAGATACGCATGGTCAGATTAATCAGCGAGTGTGCCCCTTCTGTCTGGTTCGAGAAAGAATTTGAAGAGCTGAGCTTGTCCCAGCTGGAACCAGTTTGAGGAATCACAATATCAATACTCTCTGTTGTTGCACAAACTGACGCAGATCAATGTCCAGAGGTAATATGGTTCTGCCCGTAATTTTCATCGACTGTCAGCATGTTCCTTTTTTATTTAGTACTCTGTATATCACGGCGGTATGACTATAATAAGGATATACGGCTGGTGCATTTTGAGCTTCTCTGTTTCTTGGGATAAAGCTGATAAATTTCTATTCTTGTTGGCTTTGGTAGTATGAACAGAAAGCAGGCAGTAATAAACTGATATGTGGTACTATTTTG
CDS Sequence
- >TraesCS1B02G038500.1
ATGCCCCGCTTCTCCTCCACCACGCCAATGTCGCCACCCCGCCTCCGCCTCCGCCTCCGACTCTGCGCCCGCCACTCCTCCTCCACCTCTCATCCCTCACGCATCTGGGATCCCCACGCCGCCTTCGCCGCCGCGGCACAGCGGGCGAGCTCTGGCACGCTCACTACGGAGGACGCACACCACCTGTTTGACGAATTGCTGCGGCGGGGCAATCCTGTCCAGGAGCGTCCCTTGAATAAATTTCTGGCTGCCCTCGCCCGCGCGCCCGCGTCCGCATCCTGCTGCGATGGCCCCGCCCTGGCAGTCACCCTCTTCGGCCGTTTGTCCCGAGACGTCGGACGACGGGTGGCGCAGCCAAATGTCTTCACCTATGGCGTCCTCATGGACTGCTGCTGCCGCGCTTGCCGCACAGATCTGGTGCTCGCCTTCTTTGGCCGTCTCCTCAAGACGGGCCTGGAGGCAAACCAAGTCGTCTTCAACACCCTCCTCAAGGGCCTTTGCCACACAAAGCGGGCGGATGAGGCTCTGGACGTGCTGCTTCACAGGATGCCTGAGCTGGGCTGCACTCCTAATGTGGTGGCGTATAACACCGTTATCCATGGCTTCTTTAAGGAAGGCCATGTAAGCAAGGCCTGCAATCTGTTCCATGAAATGGCGCAGCAGGGCGTTAAGCCTAATGTGGTGACATATAACTCAGTTATTGATGCGCTGTGCAAGGCCAGAGCCATGGACAAGGCAGAGGTGGTCCTTCGTCAGATGATTGATGATGGTGTTGGACCTGATAATGTGACGTATAGTAGCCTCATCCATGGATATTCCTCTTCAGGCCACTGGAAGGAGGCAGTTAGGGTATTCAAAGAGATGACAAGTCGGAGGGTTACAGCAGATGTGCATACTTACAACATGTTTATGACCTTTCTTTGCAAACATGGAAGAAGCAAAGAAGCTGCAGGAATTTTTGATACCATGGCTATCAAGGGCCTGAAACCTGACAACGTTTCATATGCTATTCGCCTTCATGGGTATGCCACCGAAGGATGCCTAGTTGACATGATCAATCTCTTCAATTCCATGGCAACACACTGCATTCTACCTAACTGTCATATATTCAACATACTGATTAATGCATATGCTAAATCTGGGAAGCTTGATAAGGCTATGCTTATCTTCAATGAAATGCAGAAACAAGGAGTGAGTCCAAATGCAGTCACATATTCAACCGTAATACATGCATTTTGCAAGAAGGGTAGGTTGGATGATGCTGTGATAAAGTTTAATCAGATGATTGATACAGGAGTACGACCGGACGCATCTGTTTATCGTCCCCTAATCCAGGGTTTTTGTACACATGGCGATTTGGTGAAAGCAAAGGAATATGTTACTGAAATGATGAAGAAAGGTATGCCTCCTCCTGATATTATGTTCTTCAGTTCAATCATGCAGAACCTATGCACAGAAGGAAGGGTAACAGAAGCACGGGATATCCTTGACTTGATAGTGCACATTGGTATGAGGCCTAATGTTATCATATTTAATTTGCTGATCGGTGGATACTGCCTAGTCCGCAAGATGGCAGATGCATTGAAAGTATTTGATGATATGGTGTCATATGGTTTAGAACCTTGTAACTTTACGTATGGTATACTTATTAATGGCTATTGCAAAAATAGAAGGATTGATGACGGGCTTATTCTGTTCAAAGAGATGCTGCACAAGGGACTTAAACCTACAACTTTTAATTATAACGTCATACTGGATGGATTATTTCTGGCTGGACAAACTGTTGCTGCAAAAGAGAAGTTTGATGAGATGGTTGAATCTGGAGTAAGTGTGTGCATTGATACATACTCTATAATTCTTGGTGGACTTTGTAGAAATAGCTGCAGTAGCGAAGCGATCACCCTTTTCCGGAAATTAAGCGCAATGAATGTGAAATTTGATATTACAATTGTCAATATCATTATTGGTGCCTTATACAGGGTCGAGAGAAACCAAGAGGCTAAGGATTTGTTTGCTGCTATGCCAGCCAATGGCTTGGTTCCTAATGCTGTTACCTACACCGTAATGATGACAAATCTTATAAAAGAAGGTTCAGTGGAAGAAGCTGACAATCTTTTCTTATCCATGGAGAAGAGCGGCTGTACTGCCAACTCTTGCCTGTTAAATCATATCATCAGAAGGTTACTGGAAAAAGGAGAGATAGTCAAGGCTGGAAATTATATGTCTAAAGTTGATGCAAAGAGCTACTCACTTGAAGCTAAAACTGTTTCGCTGCTGATCTCTCTGTTTTCAAGGAAAGGGAAATATAGAGAACACATCAAATTGCTTCCTACAAAGTATCAGTTTCTGGAAGAAGCAGCCACAGTTGAATAG
Protein Sequence
- >TraesCS1B02G038500.1.cds1
MPRFSSTTPMSPPRLRLRLRLCARHSSSTSHPSRIWDPHAAFAAAAQRASSGTLTTEDAHHLFDELLRRGNPVQERPLNKFLAALARAPASASCCDGPALAVTLFGRLSRDVGRRVAQPNVFTYGVLMDCCCRACRTDLVLAFFGRLLKTGLEANQVVFNTLLKGLCHTKRADEALDVLLHRMPELGCTPNVVAYNTVIHGFFKEGHVSKACNLFHEMAQQGVKPNVVTYNSVIDALCKARAMDKAEVVLRQMIDDGVGPDNVTYSSLIHGYSSSGHWKEAVRVFKEMTSRRVTADVHTYNMFMTFLCKHGRSKEAAGIFDTMAIKGLKPDNVSYAIRLHGYATEGCLVDMINLFNSMATHCILPNCHIFNILINAYAKSGKLDKAMLIFNEMQKQGVSPNAVTYSTVIHAFCKKGRLDDAVIKFNQMIDTGVRPDASVYRPLIQGFCTHGDLVKAKEYVTEMMKKGMPPPDIMFFSSIMQNLCTEGRVTEARDILDLIVHIGMRPNVIIFNLLIGGYCLVRKMADALKVFDDMVSYGLEPCNFTYGILINGYCKNRRIDDGLILFKEMLHKGLKPTTFNYNVILDGLFLAGQTVAAKEKFDEMVESGVSVCIDTYSIILGGLCRNSCSSEAITLFRKLSAMNVKFDITIVNIIIGALYRVERNQEAKDLFAAMPANGLVPNAVTYTVMMTNLIKEGSVEEADNLFLSMEKSGCTANSCLLNHIIRRLLEKGEIVKAGNYMSKVDAKSYSLEAKTVSLLISLFSRKGKYREHIKLLPTKYQFLEEAATVE