Information report for Psy1
Gene Details
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Functional Descriptions
- The accumulation of Psy1 transcript was associated with carotenoid content in maize endosperm, thus demonstrating the significance of the gene in the grain carotenoid biosynthetic pathway.
- In this study, the full-length genomic DNA sequence of a Psy gene (Psy-A1) located on chromosome 7A, was characterized by in silico cloning and experimental validation.
- Characterization of phytoene synthase 1 gene (Psy1) located on common wheat chromosome 7A and development of a functional marker.
- As a consequence this influences the expression of Psy-A1b leading to reduced grain YP content.
Functional Keywords
Literature and News
Gene Resources
- NCBI ID: EF600063
- UniProt accessions: A0A3B6RQ83
- EnsemblPlants: TraesCS7A02G557300.1
- Gramene: TraesCS7A02G557300.1
- GO: GO:0004311 , GO:0010287 , GO:0016020 , GO:0016117 , GO:0046905 , GO:0051996
- InterPro: IPR002060 , IPR008949 , IPR019845 , IPR033904 , IPR044843
- PANTHER: PTHR31480
- SUPFAM: SSF48576
- PROSITE: PS01044 , PS01045
- Gene3D: 1.10.600.10
- OrthoDB: A0A3B6RQ83
- SMR: A0A3B6RQ83
- CDD: cd00683
Sequences
cDNA Sequence
- >TraesCS7A02G557300.2
ATTGTCTCCTCCACGTCTCCCTTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCAAAGGCAGAGGAAGCAAGAGGACACTGGACGCAGAGAGAGGGAGACACTGGACTTTGTCCTCGCATGGAACCTTGGCAGCAGCATATTCACATACGCGCGCTCACTCTCAGCGGGATCTGGCCGTACGTGTGTATCGGCTGCTTGTTTGACGGCGATTTGGCGCAGGTTAAGGCGGCATATGCCGTGAGCTTGTAGAGGGATCGAGCTTGCAGCGGGCGTGCTGATAAGAGTATATATGCAGGGGTGCATGGCAAACTAGTGGTCGGTAGTGCGGCCACCACTCCGGCCCATACAAAGCGTGTGCGTGTCCAAGAACGCCTTTCCCCCCGGCTCACACGAGAGTGGTGAATCCATCCACGGTGCGTGCCTCAATTCTCTCCCTTGCAGGGGAGAGCAGAGCTCCGTTTCCTCCTCGGCGCGGCGGAGACGAGCTCCGGCGGTTTGGGGTTGGCGTTGCGCGCATGCAGCAGATGGCCACCACCGTCACGCTGCTGCTCGGGGCAGCCTCGTCCCCCGGCCCCGCCGCCGGTGATGGCGCCGCGCGGGACGGCTTCCAGTGCTCCCGCCTGCTACCCAAGAAGAAACAGCAGAGGCCGCGCTGGGTGCTCTGCTCGCTCAAGTACGGCTGCCTCGGCGTCGGCGAGCCGGGGGAGGCGGGCGGCCGGAGCGCGGCGTCGCCGGTGTACTCCAGCCTCACCGTCAGCCCCGGAGGCGACGCCGCCGTCGCCGTCGTCTCGTCGGAGCAGAAGGTGTACGACGTGGTGGTGAAGCAGGCGGCATTGCTCAAGCGCCAGCTGCGCCCCTCGCAGCAACAGCAGCAGGCGCCGCCAGCCGTCGCCAGGGAGCTGGACGCGCCGCGCGGCGGGCTCGGGGAGGCCTACGCCCGCTGCGGCGAGATCTGCGAGGAGTACGCCAAGACCTTCTACCTCGGGACCTTGCTGATGACCGAGGAGCGGCGGCGCGCCATATGGGCCATCTACGTATGGTGCAGGAGGACAGACGAGCTGGTGGACGGTCCCAACGCGTCGCACATCACGCCGCAGGCGCTGGACCGGTGGGAGAGGAGGCTGGAGGACCTCTTCGCCGGGCGCCCCTACGACATGCTCGACGCCGCGCTCTCTGACACCATCACCAAGTTCCCCATAGATATTCAGCCCTTCAAGGACATGATCGACGGGATGCGGACGGACCTCAAGAAGGCGAGGTACAAGAACTTTGACGAGCTCTACATGTACTGCTACTATGTTGCCGGCACCGTGGGGTTGATGAGCGTCCCGGTGATGGGCATTGCGCCCGACTCCAAGGCGACAGCTGAGAGCGTCTATGGCGCCGCTCTGGCTCTCGGGCTCGCGAACCAGCTCACCAACATACTCAGGGATGTCGGAGAAGATGCAAGAAGAGGAAGGATATATTTGCCGCAAGACGAGCTTGCGGAGGCAGGGCTCTCCGATGAAGACATCTTCAAAGGAGTCGTCACCGACAAGTGGAGAAAATTCATGAAGAGGCAGATCAAGAGGGCGAGGATGTTCTTCGAGGAGGCGGAGCGAGGGGTGACTGAGCTTAGGAAGGAGAGCCGGTGGCCGGTTTGGGCCTCTCTGTTGTTGTACCGGCAGATCCTTGACGAGATCGAAGCGAATGACTACAACAACTTCACCAAGAGGGCCTATGTTGGGAAGGCGAAAAAGGTGCTTGCGCTCCCTGTCGCGTACGGGAGATCGCTGCTCTTACCGTATTCACTGAGAAATAACCAGACCTAGAAGAAAGAACAAAGCAAGATGAAGATGGTCAGGTTAGGCTAGATAGAATGAAACATGGCAGTGTGGCGACATCTGCCTTGGAGCTCTGCATCCAGTTAGTTGGCCAAACAATGCGGCGAATCGATCAGTACAATCCTCAGTGATCAATGTTGTAGGCATGACATGAAGTTCTGGCAAAGGAAGGGAGAAGAACACTGCAGCCAACCGAGATGAAGACCAAATGTTTGCATGTATATTATTATTCTAGAACATGTGCCTTTGAAGACAGAACAACATGTATATATATACTCGTTGTTGGTCCCGAATTCGGGAAACATGTATGTTATTCTGTAAGCATATATATTCGAATAATATGGTTTGGAATGCAAAACTGAGAAAATGTGACGTTGTTTC - >TraesCS7A02G557300.1
ATTGTCTCCTCCACGTCTCCCTTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCAAAGGCAGAGGAAGCAAGAGGACACTGGACGCAGAGAGAGGGAGACACTGGACTTTGTCCTCGCATGGAACCTTGGCAGCAGCATATTCACATACGCGCGCTCACTCTCAGCGGGATCTGGCCGTACGTGTGTATCGGCTGCTTGTTTGACGGCGATTTGGCGCAGGTTAAGGCGGCATATGCCGTGAGCTTGTAGAGGGATCGAGCTTGCAGCGGGCGTGCTGATAAGAGTATATATGCAGGGGTGCATGGCAAACTAGTGGTCGGTAGTGCGGCCACCACTCCGGCCCATACAAAGCGTGTGCGTGTCCAAGAACGCCTTTCCCCCCGGCTCACACGAGAGTGGTGAATCCATCCACGGTGCGTGCCTCAATTCTCTCCCTTGCAGGGGAGAGCAGAGCTCCGTTTCCTCCTCGGCGCGGCGGAGACGAGCTCCGGCGGTTTGGGGTTGGCGTTGCGCGCATGCAGCAGATGGCCACCACCGTCACGCTGCTGCTCGGGGCAGCCTCGTCCCCCGGCCCCGCCGCCGGTGATGGCGCCGCGCGGGACGGCTTCCAGTGCTCCCGCCTGCTACCCAAGAAGAAACAGCAGAGGCCGCGCTGGGTGCTCTGCTCGCTCAAGTACGGCTGCCTCGGCGTCGGCGAGCCGGGGGAGGCGGGCGGCCGGAGCGCGGCGTCGCCGGTGTACTCCAGCCTCACCGTCAGCCCCGGAGGCGACGCCGCCGTCGCCGTCGTCTCGTCGGAGCAGAAGGTGTACGACGTGGTGGTGAAGCAGGCGGCATTGCTCAAGCGCCAGCTGCGCCCCTCGCAGCAACAGCAGCAGGCGCCGCCAGCCGTCGCCAGGGAGCTGGACGCGCCGCGCGGCGGGCTCGGGGAGGCCTACGCCCGCTGCGGCGAGATCTGCGAGGAGTACGCCAAGACCTTCTACCTCGGGACCTTGCTGATGACCGAGGAGCGGCGGCGCGCCATATGGGCCATCTACGTATGGTGCAGGAGGACAGACGAGCTGGTGGACGGTCCCAACGCGTCGCACATCACGCCGCAGGCGCTGGACCGGTGGGAGAGGAGGCTGGAGGACCTCTTCGCCGGGCGCCCCTACGACATGCTCGACGCCGCGCTCTCTGACACCATCACCAAGTTCCCCATAGATATTCAGCCCTTCAAGGACATGATCGACGGGATGCGGACGGACCTCAAGAAGGCGAGGTACAAGAACTTTGACGAGCTCTACATGTACTGCTACTATGTTGCCGGCACCGTGGGGTTGATGAGCGTCCCGGTGATGGGCATTGCGCCCGACTCCAAGGCGACAGCTGAGAGCGTCTATGGCGCCGCTCTGGCTCTCGGGCTCGCGAACCAGCTCACCAACATACTCAGGGATGTCGGAGAAGATGCAAGAAGAGGAAGGATATATTTGCCGCAAGACGAGCTTGCGGAGGCAGGGCTCTCCGATGAAGACATCTTCAAAGGAGTCGTCACCGACAAGTGGAGAAAATTCATGAAGAGGCAGATCAAGAGGGCGAGGATGTTCTTCGAGGAGGCGGAGCGAGGGGTGACTGAGCTTAGGAAGGAGAGCCGGTGGCCGGTTTGGGCCTCTCTGTTGTTGTACCGGCAGATCCTTGACGAGATCGAAGCGAATGACTACAACAACTTCACCAAGAGGGCCTATGTTGGGAAGGCGAAAAAGGTGCTTGCGCTCCCTGTCGCGTACGGGAGATCGCTGCTCTTACCGTATTCACTGAGAAATAACCAGACCTAGAAGAAAGAACAAAGCAAGATGAAGATGGTCAGGTTAGGCTAGATAGAATGAAACATGGCAGTGTGGCGACATCTGCCTTGGAGCTCTGCATCCAGTTAGTTGGCCAAACAATGCGGCGAATCGATCAGTACAATCCTCAGTGATCAATGTTGTAGGCATGACATGAAGTTCTGGCAAAGGAAGGGAGAAGAACACTGCAGCCAACCGAGATGAAGACCAAATGTTTGCATGTATATTATTATTCTAGAACATGTGCCTTTGAAGACAGAACAACATGTATATATATACTCGTTGTTGGTCCCGAATTCGGGAAACATGTATGTTATTCTGTAAGCATATATATTCGAATAATATGGTTTGGAATGCAAAACTGAGAAAATGTGACGTTGTTTC
CDS Sequence
- >TraesCS7A02G557300.2
ATGGCCACCACCGTCACGCTGCTGCTCGGGGCAGCCTCGTCCCCCGGCCCCGCCGCCGGTGATGGCGCCGCGCGGGACGGCTTCCAGTGCTCCCGCCTGCTACCCAAGAAGAAACAGCAGAGGCCGCGCTGGGTGCTCTGCTCGCTCAAGTACGGCTGCCTCGGCGTCGGCGAGCCGGGGGAGGCGGGCGGCCGGAGCGCGGCGTCGCCGGTGTACTCCAGCCTCACCGTCAGCCCCGGAGGCGACGCCGCCGTCGCCGTCGTCTCGTCGGAGCAGAAGGTGTACGACGTGGTGGTGAAGCAGGCGGCATTGCTCAAGCGCCAGCTGCGCCCCTCGCAGCAACAGCAGCAGGCGCCGCCAGCCGTCGCCAGGGAGCTGGACGCGCCGCGCGGCGGGCTCGGGGAGGCCTACGCCCGCTGCGGCGAGATCTGCGAGGAGTACGCCAAGACCTTCTACCTCGGGACCTTGCTGATGACCGAGGAGCGGCGGCGCGCCATATGGGCCATCTACGTATGGTGCAGGAGGACAGACGAGCTGGTGGACGGTCCCAACGCGTCGCACATCACGCCGCAGGCGCTGGACCGGTGGGAGAGGAGGCTGGAGGACCTCTTCGCCGGGCGCCCCTACGACATGCTCGACGCCGCGCTCTCTGACACCATCACCAAGTTCCCCATAGATATTCAGCCCTTCAAGGACATGATCGACGGGATGCGGACGGACCTCAAGAAGGCGAGGTACAAGAACTTTGACGAGCTCTACATGTACTGCTACTATGTTGCCGGCACCGTGGGGTTGATGAGCGTCCCGGTGATGGGCATTGCGCCCGACTCCAAGGCGACAGCTGAGAGCGTCTATGGCGCCGCTCTGGCTCTCGGGCTCGCGAACCAGCTCACCAACATACTCAGGGATGTCGGAGAAGATGCAAGAAGAGGAAGGATATATTTGCCGCAAGACGAGCTTGCGGAGGCAGGGCTCTCCGATGAAGACATCTTCAAAGGAGTCGTCACCGACAAGTGGAGAAAATTCATGAAGAGGCAGATCAAGAGGGCGAGGATGTTCTTCGAGGAGGCGGAGCGAGGGGTGACTGAGCTTAGGAAGGAGAGCCGGTGGCCGGTTTGGGCCTCTCTGTTGTTGTACCGGCAGATCCTTGACGAGATCGAAGCGAATGACTACAACAACTTCACCAAGAGGGCCTATGTTGGGAAGGCGAAAAAGGTGCTTGCGCTCCCTGTCGCGTACGGGAGATCGCTGCTCTTACCGTATTCACTGAGAAATAACCAGACCTAG - >TraesCS7A02G557300.1
ATGGCCACCACCGTCACGCTGCTGCTCGGGGCAGCCTCGTCCCCCGGCCCCGCCGCCGGTGATGGCGCCGCGCGGGACGGCTTCCAGTGCTCCCGCCTGCTACCCAAGAAGAAACAGCAGAGGCCGCGCTGGGTGCTCTGCTCGCTCAAGTACGGCTGCCTCGGCGTCGGCGAGCCGGGGGAGGCGGGCGGCCGGAGCGCGGCGTCGCCGGTGTACTCCAGCCTCACCGTCAGCCCCGGAGGCGACGCCGCCGTCGCCGTCGTCTCGTCGGAGCAGAAGGTGTACGACGTGGTGGTGAAGCAGGCGGCATTGCTCAAGCGCCAGCTGCGCCCCTCGCAGCAACAGCAGCAGGCGCCGCCAGCCGTCGCCAGGGAGCTGGACGCGCCGCGCGGCGGGCTCGGGGAGGCCTACGCCCGCTGCGGCGAGATCTGCGAGGAGTACGCCAAGACCTTCTACCTCGGGACCTTGCTGATGACCGAGGAGCGGCGGCGCGCCATATGGGCCATCTACGTATGGTGCAGGAGGACAGACGAGCTGGTGGACGGTCCCAACGCGTCGCACATCACGCCGCAGGCGCTGGACCGGTGGGAGAGGAGGCTGGAGGACCTCTTCGCCGGGCGCCCCTACGACATGCTCGACGCCGCGCTCTCTGACACCATCACCAAGTTCCCCATAGATATTCAGCCCTTCAAGGACATGATCGACGGGATGCGGACGGACCTCAAGAAGGCGAGGTACAAGAACTTTGACGAGCTCTACATGTACTGCTACTATGTTGCCGGCACCGTGGGGTTGATGAGCGTCCCGGTGATGGGCATTGCGCCCGACTCCAAGGCGACAGCTGAGAGCGTCTATGGCGCCGCTCTGGCTCTCGGGCTCGCGAACCAGCTCACCAACATACTCAGGGATGTCGGAGAAGATGCAAGAAGAGGAAGGATATATTTGCCGCAAGACGAGCTTGCGGAGGCAGGGCTCTCCGATGAAGACATCTTCAAAGGAGTCGTCACCGACAAGTGGAGAAAATTCATGAAGAGGCAGATCAAGAGGGCGAGGATGTTCTTCGAGGAGGCGGAGCGAGGGGTGACTGAGCTTAGGAAGGAGAGCCGGTGGCCGGTTTGGGCCTCTCTGTTGTTGTACCGGCAGATCCTTGACGAGATCGAAGCGAATGACTACAACAACTTCACCAAGAGGGCCTATGTTGGGAAGGCGAAAAAGGTGCTTGCGCTCCCTGTCGCGTACGGGAGATCGCTGCTCTTACCGTATTCACTGAGAAATAACCAGACCTAG
Protein Sequence
- >TraesCS7A02G557300.2
MATTVTLLLGAASSPGPAAGDGAARDGFQCSRLLPKKKQQRPRWVLCSLKYGCLGVGEPGEAGGRSAASPVYSSLTVSPGGDAAVAVVSSEQKVYDVVVKQAALLKRQLRPSQQQQQAPPAVARELDAPRGGLGEAYARCGEICEEYAKTFYLGTLLMTEERRRAIWAIYVWCRRTDELVDGPNASHITPQALDRWERRLEDLFAGRPYDMLDAALSDTITKFPIDIQPFKDMIDGMRTDLKKARYKNFDELYMYCYYVAGTVGLMSVPVMGIAPDSKATAESVYGAALALGLANQLTNILRDVGEDARRGRIYLPQDELAEAGLSDEDIFKGVVTDKWRKFMKRQIKRARMFFEEAERGVTELRKESRWPVWASLLLYRQILDEIEANDYNNFTKRAYVGKAKKVLALPVAYGRSLLLPYSLRNNQT - >TraesCS7A02G557300.1
MATTVTLLLGAASSPGPAAGDGAARDGFQCSRLLPKKKQQRPRWVLCSLKYGCLGVGEPGEAGGRSAASPVYSSLTVSPGGDAAVAVVSSEQKVYDVVVKQAALLKRQLRPSQQQQQAPPAVARELDAPRGGLGEAYARCGEICEEYAKTFYLGTLLMTEERRRAIWAIYVWCRRTDELVDGPNASHITPQALDRWERRLEDLFAGRPYDMLDAALSDTITKFPIDIQPFKDMIDGMRTDLKKARYKNFDELYMYCYYVAGTVGLMSVPVMGIAPDSKATAESVYGAALALGLANQLTNILRDVGEDARRGRIYLPQDELAEAGLSDEDIFKGVVTDKWRKFMKRQIKRARMFFEEAERGVTELRKESRWPVWASLLLYRQILDEIEANDYNNFTKRAYVGKAKKVLALPVAYGRSLLLPYSLRNNQT