Gene Details:
- Gene ID: TraesCS7A02G514505
- Gene Symbol: Pinb2-3
- Gene Name: Pinb2-3
- Genome: Chinese_Spring1.0
- Species: Triticum aestivum
Functional Descriptions:
- We developed new Pinb2 allele specific markers and demonstrated their usefulness by identifying new Pinb2 alleles in Triticeae species performing an association analysis of Pinb2 with kernel hardness.
- Pinb and Pinb2 loci with kernel hardness phenotypes was determined by a Chi-square test of independence.
- Using the high-quality bread wheat reference genome, we show that PINB2 are encoded by three homoeologous loci Pinb2 not syntenic to the Hardness locus, with Pinb2-7A locus containing three tandem copies.
- PINB2 proteins have several features conserved for the Pin/Pinb2 phylogenetic cluster but lack a structural basis of significant impact on kernel hardness. Pinb2 are seed-specifically expressed with varied expression levels between the homoeologous copies and among wheat varieties.
Function-related keywords:
Literature:
- Genomics-Enabled Analysis of Puroindoline b2 Genes Identifies New Alleles in Wheat and Related Triticeae Species. DOI: 10.3390/ijms21041304 ; PMID: 32075191
Related News:
Gene Resources:
Sequences:
cDNA Sequence
- >TraesCS7A02G514505.1
ATGAAGACCTTATTCCTCCTAGCTCTCCTTTCTCTTGTAGTGAGCACAACCATTGCACAATACAAAGAGGTTGGCGGCAGCTATGAGAACGGTGGCGGAGGGTTTGGTTCTCAAAACTGCCCACCGGAGAAGACGAAGCTGGACGCTTGCAAGGATTATGTGATGGAGCGGTGCTTGGCGGTGAAGGGTTTTTCAATCGCCAGGCTTTTGAAATGGTGGAAGGGCGCCTGTGAACAAGAGGCCCTAGACCAGTGTTACCAGCAACTACGCCCGATAGCAAAGAAGTGCCGTTGTGAGGCCATTTGGAGAGCCGTCCAAGGCAACCTTGGTGGCATCTTTGGTTTTCAGCAAGGCCAGATAACCAAACAAATTCAGAGGGCCATGATGTTGCTGTCCAAATGCAAATTGGATTCCAACTGCAAGTTCGTCGCTACTAATGGCTATTACTAGTGA
CDS Sequence
- >TraesCS5D02G004100.1
ATGAAGGCCCTCTTCCTCATAGGACTGCTTGCTCTGGTAGCGAGCACCGCCTTTGCGCAATATAGCGAAGTTGTTGGCAGTTACGATGTTGCTGGCGGGGGTGGTGCTCAACAATGCCCTGTAGAGACAAAGCTAAATTCATGCAGGAATTACCTGCTAGATCGATGCTCAACGATGAAGGATTTCCCGGTCACCTGGCGTTGGTGGAAATGGTGGAAGGGAGGTTGTCAAGAGCTCCTTGGGGAGTGTTGCAGTCGGCTCGGCCAAATGCCACCGCAATGCCGCTGCAACATCATCCAGGGGTCAATCCAAGGCGATCTCGGTGGCATCTTCGGATTTCAGCGTGATCGGGCAAGCAAAGTGATACAAGAAGCCAAGAACCTGCCGCCCAGGTGCAACCAGGGCCCTCCCTGCAACATCCCCGGCACTATTGGCTATTACTGGTGA
Protein Sequence
- >TraesCS5D02G004100.1.cds1
MKALFLIGLLALVASTAFAQYSEVVGSYDVAGGGGAQQCPVETKLNSCRNYLLDRCSTMKDFPVTWRWWKWWKGGCQELLGECCSRLGQMPPQCRCNIIQGSIQGDLGGIFGFQRDRASKVIQEAKNLPPRCNQGPPCNIPGTIGYYW