Gene Details:
- Gene ID: TraesCS5D02G161000
- Gene Symbol: LYS3
- Gene Name: prolamin-box-binding transcription factor
- Genome: Chinese_Spring1.0
- Species: Triticum aestivum
Functional Descriptions:
- LYS3 encodes a prolamin-box-binding transcription factor that controls embryo growth in barley and wheat.
- LYS3 encodes a transcription factor called Prolamin Binding Factor (PBF).
- PBF expression in wild-type embryos precedes the onset of embryo enlargement in LYS3 mutants, suggesting that PBF suppresses embryo growth.
- Mutations at the LYS3 locus in barley have multiple effects on grain development.
- Fine mapping LYS3 identified a 64-gene region on chromosome arm 5HL controlling embryo size.
- This showed that LYS3 mutant embryos were significantly larger than wild type embryos only after 23 DAF (Student’s t-test, p = 0.01). Thus, in wild-type embryos, the onset of PBF expression precedes the suppression of embryo growth.
Function-related keywords:
- transcription-factor , growth , development , grain , grain-size , embryo , grain-growth , prolamin , embryo-development , embryo-growth
Literature:
- LYS3 encodes a prolamin-box-binding transcription factor that controls embryo growth in barley and wheat. DOI: 10.1016/j.jcs.2020.102965 ; PMID: 32508376
Related News:
Gene Resources:
- NCBI ID: KAF7071806
- UniProt accessions: A0A3B6MNC7
Sequences:
cDNA Sequence
- >TraesCS5D02G161000.1
ATGCGACTTTTGCTACATAATCTCCTGCAGTATCGCATGGAGGAAGTGTTTCCGTCAAACTCCAAGAGCAAGGCAGGTCAGATGGCGGGGGAGGCGATAGCGGGGGCGGAGAAGAAGCCTCGGCCAAAGCCAGAGCAGAAGGTGGAATGCCCTCGGTGCAAGTCTGGCAACACCAAGTTCTGCTACTACAACAACTATAGTATGTCTCAGCCCCGCTACTTCTGCAAGGCCTGCCGCCGCTACTGGACCCATGGTGGCTCCCTCCGCAACGTCCCCATCGGTGGTGGCTGCCGCAAGCCCAAGCGCTCGGGGACCTCCGACGCCCACAAGCTCGGCGTGGCCTCCTCACCGGAACCCACGACTGTCGTGCCCCCCTCGACCTGCACAGGGATGAACTTTGCGAACGTCCTCCCGACGTTTATGTCTGTTGGTTTTGAGATTCCAAGCAGCCTTTCCCTAACCGCCTTTGGGTCATCATCGTCGTCCAACACGGCGGCGATGATGTCCCCTGGTGGGACGACGTCGTTTCTAGACGTGCTAAGAGGGGGTGCAGGAGGGCTTCTTGATGGCAGCCTCAGTCAGAACAATGGCTACTACTATGGTGGGCCAGCCATTGGATCAGGCAATGGGATGCTGATGACGCCGCCAGCGGTGTCATTTGGCATTCCAGTTCCGATGCAGCAGCATGGCGATCTCGTGGTTGGTGGAAATGGAATAGGTGCCGCAACTGCTTCAATATTTCAAGGGGCCACTAGCGAGGAAGGAGATGACGGCATGGGGGGCGTGATGGGGCTCCAATGGCAACCACAGGTTGGCAATGGTGGAGGTGGTGGTGGTGTATCAGGAGGCGTGCATCACCTCGGGACTGGGAACAATGTGACGATGGGCAACAGCAACATACACAACAACAACAATAACGACAGCGGCGGTGATGACAACAATGGTGGGTCATCGAGGGATTGCTACTGGATCAACAATGGAGGATCAAACCCATGGCAGAGCCTCCTCAACAGCAGCTCCCTGATGTAA
CDS Sequence
- >TraesCS5D02G161000.1
ATGCGACTTTTGCTACATAATCTCCTGCAGTATCGCATGGAGGAAGTGTTTCCGTCAAACTCCAAGAGCAAGGCAGGTCAGATGGCGGGGGAGGCGATAGCGGGGGCGGAGAAGAAGCCTCGGCCAAAGCCAGAGCAGAAGGTGGAATGCCCTCGGTGCAAGTCTGGCAACACCAAGTTCTGCTACTACAACAACTATAGTATGTCTCAGCCCCGCTACTTCTGCAAGGCCTGCCGCCGCTACTGGACCCATGGTGGCTCCCTCCGCAACGTCCCCATCGGTGGTGGCTGCCGCAAGCCCAAGCGCTCGGGGACCTCCGACGCCCACAAGCTCGGCGTGGCCTCCTCACCGGAACCCACGACTGTCGTGCCCCCCTCGACCTGCACAGGGATGAACTTTGCGAACGTCCTCCCGACGTTTATGTCTGTTGGTTTTGAGATTCCAAGCAGCCTTTCCCTAACCGCCTTTGGGTCATCATCGTCGTCCAACACGGCGGCGATGATGTCCCCTGGTGGGACGACGTCGTTTCTAGACGTGCTAAGAGGGGGTGCAGGAGGGCTTCTTGATGGCAGCCTCAGTCAGAACAATGGCTACTACTATGGTGGGCCAGCCATTGGATCAGGCAATGGGATGCTGATGACGCCGCCAGCGGTGTCATTTGGCATTCCAGTTCCGATGCAGCAGCATGGCGATCTCGTGGTTGGTGGAAATGGAATAGGTGCCGCAACTGCTTCAATATTTCAAGGGGCCACTAGCGAGGAAGGAGATGACGGCATGGGGGGCGTGATGGGGCTCCAATGGCAACCACAGGTTGGCAATGGTGGAGGTGGTGGTGGTGTATCAGGAGGCGTGCATCACCTCGGGACTGGGAACAATGTGACGATGGGCAACAGCAACATACACAACAACAACAATAACGACAGCGGCGGTGATGACAACAATGGTGGGTCATCGAGGGATTGCTACTGGATCAACAATGGAGGATCAAACCCATGGCAGAGCCTCCTCAACAGCAGCTCCCTGATGTAA
Protein Sequence
- >TraesCS5D02G161000.1
MRLLLHNLLQYRMEEVFPSNSKSKAGQMAGEAIAGAEKKPRPKPEQKVECPRCKSGNTKFCYYNNYSMSQPRYFCKACRRYWTHGGSLRNVPIGGGCRKPKRSGTSDAHKLGVASSPEPTTVVPPSTCTGMNFANVLPTFMSVGFEIPSSLSLTAFGSSSSSNTAAMMSPGGTTSFLDVLRGGAGGLLDGSLSQNNGYYYGGPAIGSGNGMLMTPPAVSFGIPVPMQQHGDLVVGGNGIGAATASIFQGATSEEGDDGMGGVMGLQWQPQVGNGGGGGGVSGGVHHLGTGNNVTMGNSNIHNNNNNDSGGDDNNGGSSRDCYWINNGGSNPWQSLLNSSSLM