Gene Details:

Functional Descriptions:

  • LYS3 encodes a prolamin-box-binding transcription factor that controls embryo growth in barley and wheat.
  • LYS3 encodes a transcription factor called Prolamin Binding Factor (PBF).
  • PBF expression in wild-type embryos precedes the onset of embryo enlargement in LYS3 mutants, suggesting that PBF suppresses embryo growth.
  • Mutations at the LYS3 locus in barley have multiple effects on grain development.
  • Fine mapping LYS3 identified a 64-gene region on chromosome arm 5HL controlling embryo size.
  • This showed that LYS3 mutant embryos were significantly larger than wild type embryos only after 23 DAF (Student’s t-test, p = 0.01). Thus, in wild-type embryos, the onset of PBF expression precedes the suppression of embryo growth.

Literature:

Gene Resources:

Sequences:

cDNA Sequence
  • >TraesCS5D02G161000.1
    ATGCGACTTTTGCTACATAATCTCCTGCAGTATCGCATGGAGGAAGTGTTTCCGTCAAACTCCAAGAGCAAGGCAGGTCAGATGGCGGGGGAGGCGATAGCGGGGGCGGAGAAGAAGCCTCGGCCAAAGCCAGAGCAGAAGGTGGAATGCCCTCGGTGCAAGTCTGGCAACACCAAGTTCTGCTACTACAACAACTATAGTATGTCTCAGCCCCGCTACTTCTGCAAGGCCTGCCGCCGCTACTGGACCCATGGTGGCTCCCTCCGCAACGTCCCCATCGGTGGTGGCTGCCGCAAGCCCAAGCGCTCGGGGACCTCCGACGCCCACAAGCTCGGCGTGGCCTCCTCACCGGAACCCACGACTGTCGTGCCCCCCTCGACCTGCACAGGGATGAACTTTGCGAACGTCCTCCCGACGTTTATGTCTGTTGGTTTTGAGATTCCAAGCAGCCTTTCCCTAACCGCCTTTGGGTCATCATCGTCGTCCAACACGGCGGCGATGATGTCCCCTGGTGGGACGACGTCGTTTCTAGACGTGCTAAGAGGGGGTGCAGGAGGGCTTCTTGATGGCAGCCTCAGTCAGAACAATGGCTACTACTATGGTGGGCCAGCCATTGGATCAGGCAATGGGATGCTGATGACGCCGCCAGCGGTGTCATTTGGCATTCCAGTTCCGATGCAGCAGCATGGCGATCTCGTGGTTGGTGGAAATGGAATAGGTGCCGCAACTGCTTCAATATTTCAAGGGGCCACTAGCGAGGAAGGAGATGACGGCATGGGGGGCGTGATGGGGCTCCAATGGCAACCACAGGTTGGCAATGGTGGAGGTGGTGGTGGTGTATCAGGAGGCGTGCATCACCTCGGGACTGGGAACAATGTGACGATGGGCAACAGCAACATACACAACAACAACAATAACGACAGCGGCGGTGATGACAACAATGGTGGGTCATCGAGGGATTGCTACTGGATCAACAATGGAGGATCAAACCCATGGCAGAGCCTCCTCAACAGCAGCTCCCTGATGTAA
CDS Sequence
  • >TraesCS5D02G161000.1
    ATGCGACTTTTGCTACATAATCTCCTGCAGTATCGCATGGAGGAAGTGTTTCCGTCAAACTCCAAGAGCAAGGCAGGTCAGATGGCGGGGGAGGCGATAGCGGGGGCGGAGAAGAAGCCTCGGCCAAAGCCAGAGCAGAAGGTGGAATGCCCTCGGTGCAAGTCTGGCAACACCAAGTTCTGCTACTACAACAACTATAGTATGTCTCAGCCCCGCTACTTCTGCAAGGCCTGCCGCCGCTACTGGACCCATGGTGGCTCCCTCCGCAACGTCCCCATCGGTGGTGGCTGCCGCAAGCCCAAGCGCTCGGGGACCTCCGACGCCCACAAGCTCGGCGTGGCCTCCTCACCGGAACCCACGACTGTCGTGCCCCCCTCGACCTGCACAGGGATGAACTTTGCGAACGTCCTCCCGACGTTTATGTCTGTTGGTTTTGAGATTCCAAGCAGCCTTTCCCTAACCGCCTTTGGGTCATCATCGTCGTCCAACACGGCGGCGATGATGTCCCCTGGTGGGACGACGTCGTTTCTAGACGTGCTAAGAGGGGGTGCAGGAGGGCTTCTTGATGGCAGCCTCAGTCAGAACAATGGCTACTACTATGGTGGGCCAGCCATTGGATCAGGCAATGGGATGCTGATGACGCCGCCAGCGGTGTCATTTGGCATTCCAGTTCCGATGCAGCAGCATGGCGATCTCGTGGTTGGTGGAAATGGAATAGGTGCCGCAACTGCTTCAATATTTCAAGGGGCCACTAGCGAGGAAGGAGATGACGGCATGGGGGGCGTGATGGGGCTCCAATGGCAACCACAGGTTGGCAATGGTGGAGGTGGTGGTGGTGTATCAGGAGGCGTGCATCACCTCGGGACTGGGAACAATGTGACGATGGGCAACAGCAACATACACAACAACAACAATAACGACAGCGGCGGTGATGACAACAATGGTGGGTCATCGAGGGATTGCTACTGGATCAACAATGGAGGATCAAACCCATGGCAGAGCCTCCTCAACAGCAGCTCCCTGATGTAA
Protein Sequence
  • >TraesCS5D02G161000.1
    MRLLLHNLLQYRMEEVFPSNSKSKAGQMAGEAIAGAEKKPRPKPEQKVECPRCKSGNTKFCYYNNYSMSQPRYFCKACRRYWTHGGSLRNVPIGGGCRKPKRSGTSDAHKLGVASSPEPTTVVPPSTCTGMNFANVLPTFMSVGFEIPSSLSLTAFGSSSSSNTAAMMSPGGTTSFLDVLRGGAGGLLDGSLSQNNGYYYGGPAIGSGNGMLMTPPAVSFGIPVPMQQHGDLVVGGNGIGAATASIFQGATSEEGDDGMGGVMGLQWQPQVGNGGGGGGVSGGVHHLGTGNNVTMGNSNIHNNNNNDSGGDDNNGGSSRDCYWINNGGSNPWQSLLNSSSLM