Information report for Lr13;LrZH22
Gene Details
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Functional Descriptions
- These results indicated that LrZH22/Lr13 is a high-temperature leaf rust resistance gene likely influenced by genetic background.
- Wheat leaf rust resistance gene Lr13 is a specific Ne2 allele for hybrid necrosis.
- In summary, we isolated the high-temperature leaf rust resistance gene LrZH22/Lr13 from the elite wheat cultivar Zhoumai 22 using map-based cloning, MutRenSeq, EMS mutagenesis, transgenic validation, and haplotype analysis.
- Independent cloning and genetic analysis revealed that els1/Ne2 is the same as LrZH22/Lr13. LrZH22/Lr13/els1/Ne2 encodes a NLR protein that triggers programmed cell death and exhibits pleiotropic effects on leaf rust resistance and hybrid necrosis.
- Yr27(TraesKAR2B01G0121530LC) is allelic to the leaf rust resistance gene Lr13, the Yr27 and Lr13 proteins show 97% sequence identity.
Functional Keywords
Literature and News
- Fine Mapping of the Wheat Leaf Rust Resistance Gene LrLC10 (Lr13) and Validation of Its Co-segregation Markers. DOI: 10.3389/fpls.2020.00470 ; PMID: 32477377
- High-temperature wheat leaf rust resistance gene Lr13 exhibits pleiotropic effects on hybrid necrosis. DOI: 10.1016/j.molp.2021.05.009 ; PMID: 33965635
- Long-read genome sequencing of bread wheat facilitates disease resistance gene cloning. DOI: 10.1038/s41588-022-01022-1 ; PMID: 35288708
Gene Resources
- NCBI ID: 123044110
- UniProt accessions: A0A3B6C240
- EnsemblPlants: TraesCS2B02G182800.1
- Gramene: TraesCS2B02G182800.1
- GO: GO:0006952 , GO:0043531 , GO:0051707
- InterPro: IPR002182 , IPR027417 , IPR032675 , IPR036388 , IPR041118 , IPR042197
- PANTHER: PTHR36766 , PTHR36766:SF45
- SUPFAM: SSF52058 , SSF52540
- Gene3D: 1.10.10.10 , 1.10.8.430 , 1.20.5.4130 , 3.40.50.300 , 3.80.10.10
- OrthoDB: A0A3B6C240
- SMR: A0A3B6C240
Sequences
cDNA Sequence
- >TraesCS2B02G182800.1
AGGTAAAAGCTGAAGGCGTAAGAGATAAACAGGGTTAGTACTCTGTTGTTGCCTCTGTTTCCACCGAAGTGATACCAATAACCACCGCGAACAAGAAGCATTCGTCCACCCACAAGGAAAGAAGGAGTGAGTTATTTATGGCCATGATCTTACCAGCCATTCCTGTAGCTGTTGAGGTGATTTCCAGTGTCAATGCATTGAACGAATTCGTCGGCTGGGCGACACCACACATGAAAGCGGCCATACGTTATGCACGGAACATTCCACGGTCACCAGATGAAGAGAACACAGCTGCACAACGCCAGATTCAAGAGAAAATTGAGCAGCTAGGCGATAAGCTTGGGAGGCTGAAGACTCGTATTTGGAAGCTGAAGACAACTATGCCCAAGATGCTTGACCTCATTGACAGGGTTGAGTGGCAAAGCCACAAGGAACAAGCCACTGTTCTACTCCCGGAGATCAAGGATGCAGTGTACGATGCAGAGGATCTGCTTGATGAGTTTGATTATTATGCGCTCAAGTTGAAGGTTGAGTGCAACAAAAATTTGGGGCAAGATCACTTGCATAATGCCTTCATGGAATTCTTAAACACTATAGACAGTGATGAGCCCAATAATTACACCACGAAAGTCAATGATATTCAAGAAAGACTAGATCATCTGAATCAACAGTCCAAAGATATGGGCTTGCACAAAGCAGAGCTGAGGTTTGATAAATCAGTTAGGCCAGAAACGAGTTCTTTCGTTAATGAGACAAAAATATTTGGTCGTAAAAAAGAATTGAAATCTTTGATGGAGAAGCTGGGAGTTAAAATTCCAGTTAAAAGTACAGGGAAGAGAAAATTGGCCGAAGGTAGTGCAAGAATGGAAGAATTACCTGTGTTGCCAATAGGTAATGCAAGAATGACAGAATTGTCTGTGTTGCCAATAGTCGGCATGGGAGGTATGGGAAAGACAACAATGGCCCAACAAATCTGCAATGATTCAAAGGTGAAGAAGCACTTTAATCTCATAATTTGGACATGTGCTTCAGATGATTTTGACAAAAAAAGATTAACCAAGGAGATTCTAGAACACCTGGGACAAGATACATCATCCAATAACCTGAATTTTCTTATGACAAAACTACAAGATTGTGTCAGGTCCAAAAAGTTCTTACTTGTTGTTGATGACATGTGGGATGATATCTTGAAGGATGATGGGGCGGGATGGAGGGAGTTTTGTGCACCTCTGCAAAATGGTTCTGAAGGAAGTAGGATTTTGGTCACCACTAGATTTTCCGAGGTTGCCAAAGTAATTAGCCCCACGTATCACTATGAGTTACCTTGCTTAAAAGGTGACATATTCTGGGAGTTCTTCAAACTATGTGCATTTGGATCCACGAGTTCTGGCAACAACCGTGAGTCACTAGAGTGCATTGGTAAGAATATACTTCCAAAGTTGAAGGGCAACCCATTGGCTGCCAAGACTATTGGACGTTTGTTGAGGATGGACCTAAGTACAACACATTGGGAAAATATAATGGAAAGTGAACTCTGGCAAGTAGAACAAATGGAGAATGACATTTTGCCAGCCCTTCGACTGAGCTATATGTACCTACCTCAGAACCTGAAAAGATGCTTCTCAATCTGTGCAATGTATCCCAAGGATCACAAATTTGAGATGGGTTTTTTAGCTGATATTTGGACTGCACATGGATATGCGGAGAATTCCCAAAAAGCATCACTCTATTTTAATGCCCTTGCAAATCGGTCATTCTTTCAGCAAGCATCTTCACACAGTTATATGTATGTAATTCATGATCTGATGCATGATACGGCACAGCTTGTCACAAAGGATGAGTGCTTCATCATAAAGCATCCGCGTGACATAGATAGAGTCCCTTCAACTGTCCGTCATCTGTCAATATTTGGAAACGGAGATATTGAGTGTTCTGAACTGAAGAAAATATGCAATAGCAAAAAAATAAGGACTCTGGTATGTGATGATAAATATAACAGCGGAGAAGATTTTGCTAGCGTGATTGACTGTTGGTTCAAGGAACTGTTGAAAATCCGTGTACTGAAGTTTAGAGTTGGCAAAGTAAAGAAGTTACCTGAGAGCATGGGCAACTCAAAGCATCTGCGTTACTTTTGTTTACTGGGGCCTTCCAACTTCGGCACCCTACCTTCATCGGTTTGTCGTCTGCATAAGCTCAGAATTATAGAGCGTGGTGGTGGTGTCATTAAAAGGTTTCCACCAGACTTCAGTGACCTCATCAGCTTGCAGAGAATTAATTCCAAGGGGTTCACTTATGACAGGGACCAATCTGAAAAACTCTGCCTAAAATGGCCCATTATTGAGGTTGGAGCACCTAGTAGTGAGACGGTGGGAATGAAGGAAAACCAGATGGAAGTATTACCTCACTGGAATATCCAACATTTGCATGTAGAGAATTACAAAGGTGAATCTTGTCCTAGCTGGCTCATGCCCCAGCTCCTGCCAGGGTTACGCTCGCTCAAATTTCGTAGTTGTGACAAAATCAAGAGCATACCATTTTTTGTCCCGTCAGAGGAGTCACGCGATAATGCACAAGGACCAGACAACCTTAATCGTCTTGAAGAGTTAGTTGTGCATGCTTGTTATGAAATCAATTGGCAAGGCTCGATAGTCTTACCTACTTCTCTTAGGAAGCTAACACTTTCGGCCTCAGGCTGTTCCATGGATAACCTTGTGAGCTGCTTCCGTGACCTCACCTCCCTCACTCATATGGAAATAAGGTTCGGCAGTTCATTGACATCTATCCCCCTCGATGTGTGGAGTAGCAACCTTCCATCCCTGGAGGATCTATCAATTACGGATTGCTACCGCCTTGCATCAATAAGTGCCTCTGGAGCAAGCAGCAGCAGCGGTGTTAAAGGATTCTCAGCCCTTGCTAAGATAAAATTTTACTCATGTCGCACATTACTGAGCCTTGATGAATTGCTGACGCCAGACTATCTACCTGCCGTGAAGACGATTTCTGTTACACACTGTGAAGCGTTGGCATCCGTGTCTGTCGACAGGCTCCACGGCCTGGAGAACCTGGAAATTGGACGTTGCCACAACTGTAGAATATTGTCAGTGACGTCCTCTCTTAAGCAGCTAGACTTGTATAGTTCTGACGGCATAGAATTCATCGACCTCAGCAATAGCCAGTCTCGGAGTTCTTCAGCACTGAAGGTACTTAGCATTACGGGCTGTCCAAGCCTCAGGTCCATCGGTGGTGAAGCAGCTATTGCTGAAATAATGAATGTTGGTATAACCGGGTGTCCCAACCTCACGGAGATACAACAGCCACTCGAGCGCGGGACGGGGAGGTGGTGGCCACGGGCTGATTAATTCAAGTGGACGAGAAGAAATATGAACAGCGTCTTAGATACTCAAGAGGCGAAGAGAGCACCGATAAAGGAGGACTAAGTATACAGCAACGGTCTAGTTTCAACAAAAAAGAGTACACAGCGGTGGTGTAGGGGGGCCTTCTCGTTTGCGATCGAATGCCGGAATAATTGCTCTCAATAATAATGGAAGTTGCATCATGCTGCTTGATGTTTGTTACATTTACTTTGCCCTGAAATTTGAGTTGCATTGTATGTATTTTGCTAGTTGTGAAGAAATTCTATTTTCAGTTCCAGAGATTTCAAATAATGTGCCACTAAGAACACCGGATTTGCTTGTTTATTGCCTTGTAATAATATCCATTGAAGTACTGTATATTATTAAGACCCATTCATTATTATTATT
CDS Sequence
- >TraesCS2B02G182800.1
ATGGCCATGATCTTACCAGCCATTCCTGTAGCTGTTGAGGTGATTTCCAGTGTCAATGCATTGAACGAATTCGTCGGCTGGGCGACACCACACATGAAAGCGGCCATACGTTATGCACGGAACATTCCACGGTCACCAGATGAAGAGAACACAGCTGCACAACGCCAGATTCAAGAGAAAATTGAGCAGCTAGGCGATAAGCTTGGGAGGCTGAAGACTCGTATTTGGAAGCTGAAGACAACTATGCCCAAGATGCTTGACCTCATTGACAGGGTTGAGTGGCAAAGCCACAAGGAACAAGCCACTGTTCTACTCCCGGAGATCAAGGATGCAGTGTACGATGCAGAGGATCTGCTTGATGAGTTTGATTATTATGCGCTCAAGTTGAAGGTTGAGTGCAACAAAAATTTGGGGCAAGATCACTTGCATAATGCCTTCATGGAATTCTTAAACACTATAGACAGTGATGAGCCCAATAATTACACCACGAAAGTCAATGATATTCAAGAAAGACTAGATCATCTGAATCAACAGTCCAAAGATATGGGCTTGCACAAAGCAGAGCTGAGGTTTGATAAATCAGTTAGGCCAGAAACGAGTTCTTTCGTTAATGAGACAAAAATATTTGGTCGTAAAAAAGAATTGAAATCTTTGATGGAGAAGCTGGGAGTTAAAATTCCAGTTAAAAGTACAGGGAAGAGAAAATTGGCCGAAGGTAGTGCAAGAATGGAAGAATTACCTGTGTTGCCAATAGGTAATGCAAGAATGACAGAATTGTCTGTGTTGCCAATAGTCGGCATGGGAGGTATGGGAAAGACAACAATGGCCCAACAAATCTGCAATGATTCAAAGGTGAAGAAGCACTTTAATCTCATAATTTGGACATGTGCTTCAGATGATTTTGACAAAAAAAGATTAACCAAGGAGATTCTAGAACACCTGGGACAAGATACATCATCCAATAACCTGAATTTTCTTATGACAAAACTACAAGATTGTGTCAGGTCCAAAAAGTTCTTACTTGTTGTTGATGACATGTGGGATGATATCTTGAAGGATGATGGGGCGGGATGGAGGGAGTTTTGTGCACCTCTGCAAAATGGTTCTGAAGGAAGTAGGATTTTGGTCACCACTAGATTTTCCGAGGTTGCCAAAGTAATTAGCCCCACGTATCACTATGAGTTACCTTGCTTAAAAGGTGACATATTCTGGGAGTTCTTCAAACTATGTGCATTTGGATCCACGAGTTCTGGCAACAACCGTGAGTCACTAGAGTGCATTGGTAAGAATATACTTCCAAAGTTGAAGGGCAACCCATTGGCTGCCAAGACTATTGGACGTTTGTTGAGGATGGACCTAAGTACAACACATTGGGAAAATATAATGGAAAGTGAACTCTGGCAAGTAGAACAAATGGAGAATGACATTTTGCCAGCCCTTCGACTGAGCTATATGTACCTACCTCAGAACCTGAAAAGATGCTTCTCAATCTGTGCAATGTATCCCAAGGATCACAAATTTGAGATGGGTTTTTTAGCTGATATTTGGACTGCACATGGATATGCGGAGAATTCCCAAAAAGCATCACTCTATTTTAATGCCCTTGCAAATCGGTCATTCTTTCAGCAAGCATCTTCACACAGTTATATGTATGTAATTCATGATCTGATGCATGATACGGCACAGCTTGTCACAAAGGATGAGTGCTTCATCATAAAGCATCCGCGTGACATAGATAGAGTCCCTTCAACTGTCCGTCATCTGTCAATATTTGGAAACGGAGATATTGAGTGTTCTGAACTGAAGAAAATATGCAATAGCAAAAAAATAAGGACTCTGGTATGTGATGATAAATATAACAGCGGAGAAGATTTTGCTAGCGTGATTGACTGTTGGTTCAAGGAACTGTTGAAAATCCGTGTACTGAAGTTTAGAGTTGGCAAAGTAAAGAAGTTACCTGAGAGCATGGGCAACTCAAAGCATCTGCGTTACTTTTGTTTACTGGGGCCTTCCAACTTCGGCACCCTACCTTCATCGGTTTGTCGTCTGCATAAGCTCAGAATTATAGAGCGTGGTGGTGGTGTCATTAAAAGGTTTCCACCAGACTTCAGTGACCTCATCAGCTTGCAGAGAATTAATTCCAAGGGGTTCACTTATGACAGGGACCAATCTGAAAAACTCTGCCTAAAATGGCCCATTATTGAGGTTGGAGCACCTAGTAGTGAGACGGTGGGAATGAAGGAAAACCAGATGGAAGTATTACCTCACTGGAATATCCAACATTTGCATGTAGAGAATTACAAAGGTGAATCTTGTCCTAGCTGGCTCATGCCCCAGCTCCTGCCAGGGTTACGCTCGCTCAAATTTCGTAGTTGTGACAAAATCAAGAGCATACCATTTTTTGTCCCGTCAGAGGAGTCACGCGATAATGCACAAGGACCAGACAACCTTAATCGTCTTGAAGAGTTAGTTGTGCATGCTTGTTATGAAATCAATTGGCAAGGCTCGATAGTCTTACCTACTTCTCTTAGGAAGCTAACACTTTCGGCCTCAGGCTGTTCCATGGATAACCTTGTGAGCTGCTTCCGTGACCTCACCTCCCTCACTCATATGGAAATAAGGTTCGGCAGTTCATTGACATCTATCCCCCTCGATGTGTGGAGTAGCAACCTTCCATCCCTGGAGGATCTATCAATTACGGATTGCTACCGCCTTGCATCAATAAGTGCCTCTGGAGCAAGCAGCAGCAGCGGTGTTAAAGGATTCTCAGCCCTTGCTAAGATAAAATTTTACTCATGTCGCACATTACTGAGCCTTGATGAATTGCTGACGCCAGACTATCTACCTGCCGTGAAGACGATTTCTGTTACACACTGTGAAGCGTTGGCATCCGTGTCTGTCGACAGGCTCCACGGCCTGGAGAACCTGGAAATTGGACGTTGCCACAACTGTAGAATATTGTCAGTGACGTCCTCTCTTAAGCAGCTAGACTTGTATAGTTCTGACGGCATAGAATTCATCGACCTCAGCAATAGCCAGTCTCGGAGTTCTTCAGCACTGAAGGTACTTAGCATTACGGGCTGTCCAAGCCTCAGGTCCATCGGTGGTGAAGCAGCTATTGCTGAAATAATGAATGTTGGTATAACCGGGTGTCCCAACCTCACGGAGATACAACAGCCACTCGAGCGCGGGACGGGGAGGTGGTGGCCACGGGCTGATTAA
Protein Sequence
- >TraesCS2B02G182800.1
MAMILPAIPVAVEVISSVNALNEFVGWATPHMKAAIRYARNIPRSPDEENTAAQRQIQEKIEQLGDKLGRLKTRIWKLKTTMPKMLDLIDRVEWQSHKEQATVLLPEIKDAVYDAEDLLDEFDYYALKLKVECNKNLGQDHLHNAFMEFLNTIDSDEPNNYTTKVNDIQERLDHLNQQSKDMGLHKAELRFDKSVRPETSSFVNETKIFGRKKELKSLMEKLGVKIPVKSTGKRKLAEGSARMEELPVLPIGNARMTELSVLPIVGMGGMGKTTMAQQICNDSKVKKHFNLIIWTCASDDFDKKRLTKEILEHLGQDTSSNNLNFLMTKLQDCVRSKKFLLVVDDMWDDILKDDGAGWREFCAPLQNGSEGSRILVTTRFSEVAKVISPTYHYELPCLKGDIFWEFFKLCAFGSTSSGNNRESLECIGKNILPKLKGNPLAAKTIGRLLRMDLSTTHWENIMESELWQVEQMENDILPALRLSYMYLPQNLKRCFSICAMYPKDHKFEMGFLADIWTAHGYAENSQKASLYFNALANRSFFQQASSHSYMYVIHDLMHDTAQLVTKDECFIIKHPRDIDRVPSTVRHLSIFGNGDIECSELKKICNSKKIRTLVCDDKYNSGEDFASVIDCWFKELLKIRVLKFRVGKVKKLPESMGNSKHLRYFCLLGPSNFGTLPSSVCRLHKLRIIERGGGVIKRFPPDFSDLISLQRINSKGFTYDRDQSEKLCLKWPIIEVGAPSSETVGMKENQMEVLPHWNIQHLHVENYKGESCPSWLMPQLLPGLRSLKFRSCDKIKSIPFFVPSEESRDNAQGPDNLNRLEELVVHACYEINWQGSIVLPTSLRKLTLSASGCSMDNLVSCFRDLTSLTHMEIRFGSSLTSIPLDVWSSNLPSLEDLSITDCYRLASISASGASSSSGVKGFSALAKIKFYSCRTLLSLDELLTPDYLPAVKTISVTHCEALASVSVDRLHGLENLEIGRCHNCRILSVTSSLKQLDLYSSDGIEFIDLSNSQSRSSSALKVLSITGCPSLRSIGGEAAIAEIMNVGITGCPNLTEIQQPLERGTGRWWPRAD