Gene Details:

Functional Descriptions:

  • Dinucleotide repeat-length polymorphism in the 5′UTR region of the Csl gene was associated with tiller number in diverse wheat germplasm and linked to expression differences of Csl transcripts between NILs.
  • We propose that regulation of Csl transcript and/or protein levels affects carbon partitioning throughout the plant, which plays a key role in the tin phenotype.
  • Csl transcript and/or protein levels alters carbon partitioning throughout the plant, preventing tiller-bud outgrowth and resulting in increased lignification and strength of stems in tin plants.
  • A candidate gene for tin was identified through map-based cloning and was predicted to encode a cellulose synthase-like (Csl) protein with homology to members of the CslA clade.
  • Dinucleotide repeat-length polymorphism in the 5 UTR region of the Csl gene was associated with tiller number in diverse wheat germplasm and linked to expression differences of Csl transcripts between NILs.

Literature:

Gene Resources:

Sequences:

cDNA Sequence
  • >TraesCS1A02G010500.1
    ATGCAGGTGTTCCGTCTTTCCATCGGCGCGGCTTGCGGCCTGTGGTGGCCGGCCGATAAGCTGGTGATCCAGGTGTTGGACGACTCCACGGACGCCGGCATCCGCTCCCTGGTGGAGGCCGAGTGCCGACGGTGGGCGGGCAAGGGGGTGCACATCCGGTACGAGAACCGCAGCAACCGTAGCGGCTACAAGGCGGGCGCCATGCGGGATGGCCTCAAGAAGCAGTACGTGAAAGACTGCGAGTTCGTGGCCGTCTTCGACGCCGACTTCCAGCCCGACGCCGACTTCCTCCGCCACACAGTCCCCGTGCTCGAGGCGGACCCGGCGGTGGCACTGGTGCAGGCGCGGTGGCGGTTCGTGAACGCGGACGAGTGCATCCTCACCCGCATGCAGGAGATGTCGCTGGACTACCACTTTTCGGTGGAGCAGGAGGTGGGGTCGGCCTTCCACGGCTTTTTCAGCTTCAACGGCACTGCCGGGGTGTGGCGGTTGCACGCCCTGGCCGACGCGGGGGGCTGGAAGGACCGCACCACCGTGGAGGATATGGACCTGGCCGTCAGGGCGTCCATGCGGGGCTGGAGGTTCGTCTACGCCGGCGACGTGCAGGTGCGCAACGAGCTACCCAGCAGCTTCAAGGCGTATCGGTACCAGCAGCACCGGTGGTCGTGTGGGCCGCCCAACCTCATGCGCAAGATGTTCTGGGAGATCGTCGCCAACAAGCAGGTGTCGGCGTGGAAGAAGCTCCACGTGCTCTACGGCTTCTTCTTCGTCAGGAAGGTGGTGGCGCATCTGGCGACGTTCCTCTTCTGCTGCGTTGTCATCCCGGTCTACGTGCTCGTCGGCGGCCAGGATGTGTGGCTCCCACAGTACGTGCCCATGTATGTGGCGGCCGTCCTCACCCTGCTCAACGCCGTGTGCACCCCGAGGTCGTGCCACCTGCTCGTCTTCTGGATCCTCTTCGAGAATGTCATGTCCATTCACCGCTGCAAGGCCACCATCATCGGGCTCCTCGAGGCCAGCCGCGCAAACGAGTGGGTCGTCACCGAGAAGCTCGGCGGCTCCACGACCTCCACTCCTGCTGCCGCCACCACGACCATGGTGGCCAAGAAGAAGAAGAGCAGCAGCAGCTTCCTGGCGCCGGAGATCGTCATGGGGCTCTTCCTGCTCTACTGCGCTCTCTACGACATTGTCTTCGGCCACGACCACTTCTATGTCTACCTCCTCATGCAGTCCGCCGCCGCCTTCGTCATCGGATTCGGCTACGTCGGCTCCCAATGAAATCAATCAGAGTCCGCAGGACATTCCGCACGTCCGTCAAATGGAATCAATCAGGGCATGTACAATGATTAATAAGAGACTTATGCTTCGGTAGACCCCCCTAAACACTTGGACGGCTCAGATTATCCGATACCTCTTCGTTA
CDS Sequence
  • >TraesCS1A02G010500.1
    ATGCAGGTGTTCCGTCTTTCCATCGGCGCGGCTTGCGGCCTGTGGTGGCCGGCCGATAAGCTGGTGATCCAGGTGTTGGACGACTCCACGGACGCCGGCATCCGCTCCCTGGTGGAGGCCGAGTGCCGACGGTGGGCGGGCAAGGGGGTGCACATCCGGTACGAGAACCGCAGCAACCGTAGCGGCTACAAGGCGGGCGCCATGCGGGATGGCCTCAAGAAGCAGTACGTGAAAGACTGCGAGTTCGTGGCCGTCTTCGACGCCGACTTCCAGCCCGACGCCGACTTCCTCCGCCACACAGTCCCCGTGCTCGAGGCGGACCCGGCGGTGGCACTGGTGCAGGCGCGGTGGCGGTTCGTGAACGCGGACGAGTGCATCCTCACCCGCATGCAGGAGATGTCGCTGGACTACCACTTTTCGGTGGAGCAGGAGGTGGGGTCGGCCTTCCACGGCTTTTTCAGCTTCAACGGCACTGCCGGGGTGTGGCGGTTGCACGCCCTGGCCGACGCGGGGGGCTGGAAGGACCGCACCACCGTGGAGGATATGGACCTGGCCGTCAGGGCGTCCATGCGGGGCTGGAGGTTCGTCTACGCCGGCGACGTGCAGGTGCGCAACGAGCTACCCAGCAGCTTCAAGGCGTATCGGTACCAGCAGCACCGGTGGTCGTGTGGGCCGCCCAACCTCATGCGCAAGATGTTCTGGGAGATCGTCGCCAACAAGCAGGTGTCGGCGTGGAAGAAGCTCCACGTGCTCTACGGCTTCTTCTTCGTCAGGAAGGTGGTGGCGCATCTGGCGACGTTCCTCTTCTGCTGCGTTGTCATCCCGGTCTACGTGCTCGTCGGCGGCCAGGATGTGTGGCTCCCACAGTACGTGCCCATGTATGTGGCGGCCGTCCTCACCCTGCTCAACGCCGTGTGCACCCCGAGGTCGTGCCACCTGCTCGTCTTCTGGATCCTCTTCGAGAATGTCATGTCCATTCACCGCTGCAAGGCCACCATCATCGGGCTCCTCGAGGCCAGCCGCGCAAACGAGTGGGTCGTCACCGAGAAGCTCGGCGGCTCCACGACCTCCACTCCTGCTGCCGCCACCACGACCATGGTGGCCAAGAAGAAGAAGAGCAGCAGCAGCTTCCTGGCGCCGGAGATCGTCATGGGGCTCTTCCTGCTCTACTGCGCTCTCTACGACATTGTCTTCGGCCACGACCACTTCTATGTCTACCTCCTCATGCAGTCCGCCGCCGCCTTCGTCATCGGATTCGGCTACGTCGGCTCCCAATGA
Protein Sequence
  • >TraesCS1A02G010500.1.cds1
    MQVFRLSIGAACGLWWPADKLVIQVLDDSTDAGIRSLVEAECRRWAGKGVHIRYENRSNRSGYKAGAMRDGLKKQYVKDCEFVAVFDADFQPDADFLRHTVPVLEADPAVALVQARWRFVNADECILTRMQEMSLDYHFSVEQEVGSAFHGFFSFNGTAGVWRLHALADAGGWKDRTTVEDMDLAVRASMRGWRFVYAGDVQVRNELPSSFKAYRYQQHRWSCGPPNLMRKMFWEIVANKQVSAWKKLHVLYGFFFVRKVVAHLATFLFCCVVIPVYVLVGGQDVWLPQYVPMYVAAVLTLLNAVCTPRSCHLLVFWILFENVMSIHRCKATIIGLLEASRANEWVVTEKLGGSTTSTPAAATTTMVAKKKKSSSSFLAPEIVMGLFLLYCALYDIVFGHDHFYVYLLMQSAAAFVIGFGYVGSQ