Information report for Sobic.009G233000.1.p
Gene Details
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Functional Annotation
- Refseq: XP_002440254.2 — WUSCHEL-related homeobox 12
- Swissprot: A3B6V0 — WOX12_ORYSJ; WUSCHEL-related homeobox 12
- TrEMBL: A0A1B6PA40 — A0A1B6PA40_SORBI; Uncharacterized protein
- STRING: Sb09g028562.1 — (Sorghum bicolor)
- GO:0008284 — Biological Process — positive regulation of cell proliferation
- GO:0009735 — Biological Process — response to cytokinin
- GO:0009793 — Biological Process — embryo development ending in seed dormancy
- GO:0010075 — Biological Process — regulation of meristem growth
- GO:0005634 — Cellular Component — nucleus
- GO:0005737 — Cellular Component — cytoplasm
- GO:0044212 — Molecular Function — transcription regulatory region DNA binding
Family Introduction
- A homeobox (HB) encodes a protein domain, the homeodomain (HD), which is a conserved 60-amino acid motif present in transcription factors found in all the eukaryotic organisms. This 60-amino acid sequence folds into a characteristic three-helix structure that is able to interact specifically with DNA. Most HDs are able to bind DNA as monomers with high affinity, through interactions made by helix III (the so-called recognition helix) and a disordered N-terminal arm located beyond helix I. The high degree of conservation of this type of domain among diverse proteins from different kingdoms indicates that this structure is crucial to maintain the HD functionality and that the role played by this domain is vital.
- The WOX genes form a plant-specific subclade of the eukaryotic homeobox transcription factor superfamily, which is characterized by the presence of a conserved DNA-binding homeodomain. The analysis of WOX gene expression and function shows that WOX family members fulfill specialized functions in key developmental processes in plants, such as embryonic patterning, stem-cell maintenance and organ formation. These functions can be related to either promotion of cell division activity and/or prevention of premature cell differentiation.
Literature and News
Gene Resources
Sequences
CDS Sequence:
- >Sobic.009G233000.1.p|Sorghum_bicolor|WOX|Sobic.009G233000.1.p
ATGGCGTCCTCGAACAGGCACTGGCCGAGCATGTACAGGTCCAGCCTCGCCTGCAACTTCCAGCAGCCGCAGCCTGACATGAACAACGGCGGCAAGTCCTCACTTATGTCCTCAAGGTGCGAGGAGAACGGCGGAAGGAATCCGGAGCCGAGGCCGCGGTGGAACCCGCGGCCGGAGCAGATCAGGATCCTGGAAGGGATCTTCAACTCCGGCATGGTGAACCCGTCGCGCGACGAGATCCGCCGCATCCGCCTCCAGCTGCAGGAGTACGGCCCCGTCGGTGACGCCAACGTCTTCTACTGGTTCCAGAACCGCAAGTCCCGCACCAAGCACAAGCTGCGCGCCGCGGGGCAGCTGCAGCCGTCCGCCCGCGCCGCCCTGGCGCGCGCGTGCGCGCCCCCGGCGCCCGTGACGCCACCGAGGCACCTTCAGCTCGCGGCGGCTGCTCCTCCTCCCGTGGCGCCCACGTCCTCGTCCTCGTCGTCCTCCGACCGGTCCTCGGGGTCGTCGAGCAAGTCGGTGACACCGACGACCGCCGTCGCGCTTGCGTCACCGGTTGTCGTCCAGGGCGTGATTCCGACGACGGCCATGGACCTGCTTACGCCGCTGCCGCCGTCGGCGGCGGCTCTGGCCGCACGCCAACTCTACTACCAGTACCAAAGCCAGATCATGGCGCCTGCTAACGCGCCGCCGATGCCCGATCTGATGATCGCATCCCCCGAGCCACTCCTTCCGCAGTGGCAGCAAGGCGAACAGCATTACCTGCCGGCCACCGAGCTCGGCGGCGTCCTCGGCGGCCACACCCACACGCCCCACGAGCCGCCGGCCATGCACCGGGCCGTCTCGCTCTCACCCAGCGCCCTCTTTGGCATGTGCAACGAAGCTCTAGGGCAAGACTACGCCGACATCAGCATCGTCTCCAAAGGACTCGGCCATGGCCAGTTCTGGAATAACGACACCACCTGCGGTTCTGATCTGAGCAATACCAAGACCGACGCCGTGAGCGCCGTGATCAGGGACGACGAGAAGGCCAGGCTGGGGTTATTCCACTACTACGGCTTGGCGGGCGCGACGAACGCTGCTGCGGCTGTCGCTTCGGCCCCTCTTGCCGCCGCCGCTGCTGCAGATGCCAGTACGGCCGCCATGCTGCTTCCAAGCTCTGCGCCGAGCAACGCCGCCGCGGCCACGAGCGCCGCCGTACTCACCGATCAGTTGCAAGGGCTGTTGGATGCTGGGCTACTGATCGGGGAGACGACGCCGCCGCCGACGGCGACGGTGGTGGCCGTGGCGCGGGACGCCGTGACGTGCGCGGCCACGGCCACCGCGCAGTTCAGCGTGCCGGCGATGCGCTTGGACGTGAAGCTGGCGTTCGGCGAGGCCGCCGTGCTGGCGCGCCAAACCGGCGAGGCGGTCCCCGTCGACGAGTCCGGCGTCACCGTCGAGCCGCTCCAGCAGGACGCTCTCTACTACGTGCTCATGGCGACTAATTAA
Protein Sequence:
- >Sobic.009G233000.1.p|Sorghum_bicolor|WOX|Sobic.009G233000.1.p
MASSNRHWPSMYRSSLACNFQQPQPDMNNGGKSSLMSSRCEENGGRNPEPRPRWNPRPEQIRILEGIFNSGMVNPSRDEIRRIRLQLQEYGPVGDANVFYWFQNRKSRTKHKLRAAGQLQPSARAALARACAPPAPVTPPRHLQLAAAAPPPVAPTSSSSSSSDRSSGSSSKSVTPTTAVALASPVVVQGVIPTTAMDLLTPLPPSAAALAARQLYYQYQSQIMAPANAPPMPDLMIASPEPLLPQWQQGEQHYLPATELGGVLGGHTHTPHEPPAMHRAVSLSPSALFGMCNEALGQDYADISIVSKGLGHGQFWNNDTTCGSDLSNTKTDAVSAVIRDDEKARLGLFHYYGLAGATNAAAAVASAPLAAAAAADASTAAMLLPSSAPSNAAAATSAAVLTDQLQGLLDAGLLIGETTPPPTATVVAVARDAVTCAATATAQFSVPAMRLDVKLAFGEAAVLARQTGEAVPVDESGVTVEPLQQDALYYVLMATN*