Information report for XP_010090255.1
Gene Details
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Functional Annotation
- Refseq: XP_010090255.1 — trihelix transcription factor GTL2 isoform X2
- TrEMBL: W9R6Q3 — W9R6Q3_9ROSA; Trihelix transcription factor GTL2
- STRING: XP_010090255.1 — (Morus notabilis)
- GO:0045893 — Biological Process — positive regulation of transcription, DNA-templated
- GO:0005634 — Cellular Component — nucleus
- GO:0001158 — Molecular Function — enhancer sequence-specific DNA binding
- GO:0005516 — Molecular Function — calmodulin binding
Family Introduction
- GT factors constitute a plant-specific transcription factor family with a DNA-binding domain that binds GT elements. The DNA-binding domain of GT factor, rich in basic and acidic amino acids and proline and glutamine residues, features a typical trihelix (helix-loop-helix-loop-helix) structure that determines the specific binding of GT elements; thus GT factors are also called trihelix transcription factors. GT elements are highly degenerate cis-elements with A/T-rich core sequences (Villain et al. 1996; Wang et al. 2004). Interaction between GT factors and GT elements has been implicated in the complex transcriptional regulation of many plant genes.
Literature and News
Sequences
CDS Sequence:
- >XP_010090255.1|Morus_notabilis|Trihelix|XP_010090255.1
ATGTTCGATGGAGTACCACCTCATGACCAGTTGCACCAATTCATAGCTTCATCAAGAGCTGCAGCAGCTGCTTCCCCACTCCCACTTCCTCTCTCCTCTTCCCCTCTCCACTCTCAAACTGCCTTCTCTACTAACTCCTTTGACGTCTCGGCTTATAATATAATTCCTCATCACCATCAACTTCTACTTCCTCACCAACAACATCAGCAACCGCAGTTTGTGCACCCAATATTATTGCACCAGTCTTCTAACAATAATTCCCACAAGAGCAGCATCAATAATGAAGAGAAAGAAGCAAGCAACTTGGTGGAGATCGAAAGAGAGAGATCAGTTCCTGAGCCGAATAATACTATTGATGATCCAGCTTGGAGTAACGACGAGGTCCTTGCGCTGTTGAGGATCAGATCTACCATGGAGAATTGGTTCCCGGACTTCACTTGGGAACATGTTTCCAGGAAGCTATCAGAGATTGGTTTCAAAAGGAGCGGTGAGAAGTGCAAGGAGAAATTTGAAGAGGAAAGCAGGTACTTCAACAACATTAATAATTGCACCAAGAGCTGCAGGTTTCTCTGCACTGACCACCTAGAGGTGGAGGAGGAGGAGGAGGTGGAGGAGGGGCTTAATTATCACACCCAAAACCCAGCTCATCAGACCAATATCATTGGGACCCAAAAGAGACAAATTATATCAGTAGTACTACCGGAGAATCAGGATAAAGTTAGGGGTGCTACTGGTACTGGTAATGGTACTGCTCAGATCAGTTTGGAAGATCAATTAGGCTCTCCAAGAAATCATGATCATGATCATCATCAAACGTTTAATGGTTCTGCGAAAGAGTCTGATCATGATTTAGAAAATGATCATCATGATAGTAGCAGTACTAGATCGAAAAGTAAGAAGAGAAAGAGACAGAAGATAAAGTTTGAGATGTTCAAGGGCTTCTGCGAGGACATTGTGAGCAAGATGATGTCTCAACAGGAGGAGATGCACAACAAGCTTGTCGAAGATATGGTGAAGAGAGACAAAGAGAAGGTTGAGAAAGAAGAGGCTTGGAAGAAGCAAGAGATGGATAGGATGAACAAGGAGCTTGACATTATGGCTCACGAACAAGCCATTGCCGGTGACAGACAAGCCACAATCATTGACTTCTTAAACAAGTTCATTTCATCGTCGTCATCCGGCACTATTACTACTACCACTACCACAATTTCTTCCGAATCTGATCATCATATAAACCATTTTTCAGGACCCAAAAAAGGGAAAGATTCTCTCGACAAGGCTGTACTCGTGAAGAATACTCCAAAAAATCATACAGACTTTTCTCTCACTCCTTTGATTCAAGCCGCGCATGGAAGCCTTAATGATCTTGAAGAGCAAAACAACAGTAATATTGTCGTCGAAGAACAGCCGTCGTCGTCTGCCATGATTGTACGACCTCAAAACTCGAGCTTATCTACTCAGAAAAACGTAATATCCGAACAGCCCCAACAAAACCCTACTTCTTCACCAACCAAAAACCCTAGCAGTACCACTTCAACGCAGAAAGTGGCCATAAACGACATTAAAGACGACGTTGGAAAGAGATGGCCGAGAGACGAAGTTTTGGCGCTGATAAACCTAAGGTGCAGTCTCTACAACAGTGGAGATCATATTCAAGAAAAGGAAGGAAGTAATTCAGTAGTGAAAGCTCCACTGTGGGAGAGAATCTCTCAAGGAATGTCTGAATTGGGTTACAAAAGGAGTGCAAAGAGGTGTAAAGAGAAGTGGGAGAACATAAACAAGTACTTCAGAAAAACAAAGGATGTTAACAAGAAGAGGTCGGTTGAGTCTAGGACTTGCCCGTATTTTCACCAACTAAGTACTTTGTATAATAAAGGAACACTTGTTGCACCTAATTCTCAAGGCCCGGATCAGGAAATGAATCATCATTCTTCTCAACTTGAGTCTTTAGCTGATCATGATCATGATGATCATGATGATGATGATCATCATCATCATTCCTCTGACGTCCATGTTGCTGAAGGTGAGAGATCACCGCACAATCATGTTGTTGTTGTTCATCATCAAGAAGTAGTACCAGCGGCTTTTGATTTTGAATTCTAA
Protein Sequence:
- >XP_010090255.1|Morus_notabilis|Trihelix|XP_010090255.1
MFDGVPPHDQLHQFIASSRAAAAASPLPLPLSSSPLHSQTAFSTNSFDVSAYNIIPHHHQLLLPHQQHQQPQFVHPILLHQSSNNNSHKSSINNEEKEASNLVEIERERSVPEPNNTIDDPAWSNDEVLALLRIRSTMENWFPDFTWEHVSRKLSEIGFKRSGEKCKEKFEEESRYFNNINNCTKSCRFLCTDHLEVEEEEEVEEGLNYHTQNPAHQTNIIGTQKRQIISVVLPENQDKVRGATGTGNGTAQISLEDQLGSPRNHDHDHHQTFNGSAKESDHDLENDHHDSSSTRSKSKKRKRQKIKFEMFKGFCEDIVSKMMSQQEEMHNKLVEDMVKRDKEKVEKEEAWKKQEMDRMNKELDIMAHEQAIAGDRQATIIDFLNKFISSSSSGTITTTTTTISSESDHHINHFSGPKKGKDSLDKAVLVKNTPKNHTDFSLTPLIQAAHGSLNDLEEQNNSNIVVEEQPSSSAMIVRPQNSSLSTQKNVISEQPQQNPTSSPTKNPSSTTSTQKVAINDIKDDVGKRWPRDEVLALINLRCSLYNSGDHIQEKEGSNSVVKAPLWERISQGMSELGYKRSAKRCKEKWENINKYFRKTKDVNKKRSVESRTCPYFHQLSTLYNKGTLVAPNSQGPDQEMNHHSSQLESLADHDHDDHDDDDHHHHSSDVHVAEGERSPHNHVVVVHHQEVVPAAFDFEF