Information report for WALNUT_00018740-RA
Gene Details
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Functional Annotation
- Refseq: XP_018851057.1 — PREDICTED: uncharacterized protein LOC109013424
- TrEMBL: A0A2I4H4I7 — A0A2I4H4I7_JUGRE; uncharacterized protein LOC109013424
- STRING: evm.model.supercontig_2145.1 — (Carica papaya)
Family Introduction
- GT factors constitute a plant-specific transcription factor family with a DNA-binding domain that binds GT elements. The DNA-binding domain of GT factor, rich in basic and acidic amino acids and proline and glutamine residues, features a typical trihelix (helix-loop-helix-loop-helix) structure that determines the specific binding of GT elements; thus GT factors are also called trihelix transcription factors. GT elements are highly degenerate cis-elements with A/T-rich core sequences (Villain et al. 1996; Wang et al. 2004). Interaction between GT factors and GT elements has been implicated in the complex transcriptional regulation of many plant genes.
Literature and News
Homologs
- Actinidia chinensis: Achn049431
- Citrus sinensis: orange1.1g013261m, orange1.1g013208m
- Fragaria vesca: mrna08029.1-v1.0-hybrid
- Gossypium arboreum: Cotton_A_10382_BGI-A2_v1.0
- Gossypium hirsutum: Gh_A02G0662
- Manihot esculenta: Manes.18G091000.1.p, Manes.02G179000.2.p, Manes.02G179000.1.p
- Populus trichocarpa: Potri.005G191700.1, Potri.005G191700.2
- Prunus mume: XP_008237585.1
- Prunus persica: Prupe.8G028500.1.p
- Ricinus communis: 29576.m000233, 29576.m000226
Sequences
CDS Sequence:
- >WALNUT_00018740-RA|Juglans_regia|Trihelix|WALNUT_00018740-RA
ATGGGACCAAGGCAGCTTCGTCGTGAACAAAACCCGTGTCTAGATCAGCAAGAGTCTTCAGTTCAACCACAATTACAAGAAGGTTTCCCTCTTCAGTTACTAAACTTGCTAAAACACGATCAACCTGGCTATTATGTTGATCATAATAAGCGTGAGAGAGGGAAAAACTCGGGAAGTGATGATGATGAGATGAATTGTGTGGAAGAAGGCGTTGATGGGCATGATGGTAAAGGGAAGAAAGGGTCCCCATGGCACCGTATGAAATGGACGGAGAAAATGGTGAAACTTTTGATCACCATTGTATCCTACATTGGGGAGGATGCTTCCTCTGGTTGTATCACCAGTGGGAGAAGGAAGTCTTCACTTTTGCTGAAGAAAGGGAAATGGATGTGTGTCTCAGAGGTCATGGCTGAGAGGGGTCATCATATATCTCCTCAGCAATGTGAGGACAAGTTTAATGATCTGAACAAGAGGTATAAGAAGCTTAATGATATTCTGGGCAGAGGCACTTCTTGCAAGGTTGTTGAGAACCCAAATATTTTGGATGTGATGGATTTACCAATGAAGGCAAAGGAGGATGTGAGGAAGATTTTAAGCTCAAAACATCTGTTCTATGAAGAGATGTGTTCTTATCACAATGGGAATCGATTATATCTTCCTCATTATCCGGATGTGCAGTGGTCTTTGCAATTAGCTCTTGGAACTAAAGACGGTTGTGAGCCTCATGACTTGATGCCAAAAAGAGCTGATGACTTTGATGAAGAAGATCAAGATGCTGGAGCTGATGATCAGGATGAGGAAAATGGTGAAATGTATGCTGGCTTTCATGAGGTCCCTGCAAAGAGGTTGAAACGAAGCAAAAAAGCTGAAGAGTCGAGTTTTTCTAATCCTTTGAATTTTTTGGGTCATAACAGAGGTTTAGGTTTTCATCTCAAAAAAGATTATACAGCTTTGAACCATGTTTACTCTGAGAGTGGCAAGGCAAATGAGTTGAGGGAGCAGTGGATGACGCTTCGCTCACTACAGTTGGAAGAGCAGGAGTTGCAGATTAAGGCTCAGATGCTTGAGTTGGAAAAGCAACATTTTGAATGGCATAGGATGAGCTGGAAACATGACAGAGAGTTGGAAAAGCTGAGGCTGGAAAATGAATCCATGAAGCTTGAAAATGAGCACATGGCATTAGAACTTAACCGCAAGAAAATTTTGCCGAAAACCAAGGGTGGCATTGATGTCTCGGTTCTGGCATCTGAGCCAACTACAACTAAGAAGTTGGTGGAAACCAAAGAGGAGAAGGAGGAGGAGGTGAAGGTTCAGCAAGAAGAGAAGAAGATTGATGGAAATGTTGGAGGGCAGAACGCTGGCGGTGGGAAGTCCGGTGATGAGAACGGGGCCCTGGCCGTTGGCTCCTTGCTCAATGAGACTAAAGAAAAGAAAGAGGCAAAAGAGATTGAGAAGAACGGCGAAATGTCATCAGAGCCGAAAGAAGAGAAGACAAGTATTGGGGAGGTAAAGGGCGAACCAGAGAAAACACCAGCAGCTGCCGCAGATGCAGAAGGCAAAGAAAACAATAAATCTGAGAAGAAAACCGCAGATAAAGAGGTGAAGGGTGAAGTACAAGAGCAAGAACCTGAAGCTGCAGCAGATGCAAAACACGAAGAAGACAAGAAATGTGAGAAGGGGAATATTGCAGCTAAGGAGGTGAAGGATGAACCAGAGAAAGCACTGAAGATCATGACTCTGGATAAGGAGGCTAAGGGTGAACCAGAAAAAGCACCTGAAGCTGCAACATATGCCAATAACAAAGAAGAAAAAATATATGAGAAGAATAGTACCGGAGATAAGGAGATAGAGGGTGAACCAGAGAAAGCACTGCAGAAGACCGCAGATAAGGAGGTAAAGGTTGAAGTAGAGAAAGAACCAAAGAAGACCCCAGATAATGAGATGAAGGGTGAATCAGAGAAAGCACCTGAACCTGCAGCAAATGCCATAAACAAAGAAGGCAATAAATATGGGATGAATACAGTAAATAAGGAGGTAAAAGGGTGA
Protein Sequence:
- >WALNUT_00018740-RA|Juglans_regia|Trihelix|WALNUT_00018740-RA
MGPRQLRREQNPCLDQQESSVQPQLQEGFPLQLLNLLKHDQPGYYVDHNKRERGKNSGSDDDEMNCVEEGVDGHDGKGKKGSPWHRMKWTEKMVKLLITIVSYIGEDASSGCITSGRRKSSLLLKKGKWMCVSEVMAERGHHISPQQCEDKFNDLNKRYKKLNDILGRGTSCKVVENPNILDVMDLPMKAKEDVRKILSSKHLFYEEMCSYHNGNRLYLPHYPDVQWSLQLALGTKDGCEPHDLMPKRADDFDEEDQDAGADDQDEENGEMYAGFHEVPAKRLKRSKKAEESSFSNPLNFLGHNRGLGFHLKKDYTALNHVYSESGKANELREQWMTLRSLQLEEQELQIKAQMLELEKQHFEWHRMSWKHDRELEKLRLENESMKLENEHMALELNRKKILPKTKGGIDVSVLASEPTTTKKLVETKEEKEEEVKVQQEEKKIDGNVGGQNAGGGKSGDENGALAVGSLLNETKEKKEAKEIEKNGEMSSEPKEEKTSIGEVKGEPEKTPAAAADAEGKENNKSEKKTADKEVKGEVQEQEPEAAADAKHEEDKKCEKGNIAAKEVKDEPEKALKIMTLDKEAKGEPEKAPEAATYANNKEEKIYEKNSTGDKEIEGEPEKALQKTADKEVKVEVEKEPKKTPDNEMKGESEKAPEPAANAINKEGNKYGMNTVNKEVKG