Information report for Tp6g39040
Gene Details
Functional Annotation
- Refseq: XP_006398825.1 — trihelix transcription factor PTL isoform X1
- Swissprot: Q9LZS0 — PTL_ARATH; Trihelix transcription factor PTL
- TrEMBL: V4LKD8 — V4LKD8_EUTSA; Uncharacterized protein
- STRING: XP_006398825.1 — (Eutrema salsugineum)
- GO:0006355 — Biological Process — regulation of transcription, DNA-templated
- GO:0009909 — Biological Process — regulation of flower development
- GO:0010200 — Biological Process — response to chitin
- GO:0046621 — Biological Process — negative regulation of organ growth
- GO:0048442 — Biological Process — sepal development
- GO:0048498 — Biological Process — establishment of petal orientation
- GO:0090428 — Biological Process — perianth development
- GO:0005634 — Cellular Component — nucleus
- GO:0003677 — Molecular Function — DNA binding
- GO:0042803 — Molecular Function — protein homodimerization activity
Family Introduction
- GT factors constitute a plant-specific transcription factor family with a DNA-binding domain that binds GT elements. The DNA-binding domain of GT factor, rich in basic and acidic amino acids and proline and glutamine residues, features a typical trihelix (helix-loop-helix-loop-helix) structure that determines the specific binding of GT elements; thus GT factors are also called trihelix transcription factors. GT elements are highly degenerate cis-elements with A/T-rich core sequences (Villain et al. 1996; Wang et al. 2004). Interaction between GT factors and GT elements has been implicated in the complex transcriptional regulation of many plant genes.
Literature and News
Sequences
CDS Sequence:
- >Tp6g39040|Thellungiella_parvula|Trihelix|Tp6g39040
ATGGACGATCATCATCCTCAGTACGGTATACCGGAGCTCCGGCAGCTCATGAAAGGCGGAGCGAGGACGACTACGGCGGCATCACCGTCGACTTCTTCTCATTTCCCCTCTGATTTCTTCGGCTTCAACCTCGCCCCGGCTGCGCCGCAACACCAGCGTCTACATCAGTTCACTACTGATCAGGAGATGGGTTTCTTGCCACGTGGCATACATGGGTTGGGTGGGGGTTCTTCGACGGCTGGAAATAACTGTAACTTAAACGCGAGTACCAGTGGTGGAGGAGTTGGGTTTAGTGGGTTTCTAGACGGAGGAGGTTTGGGCGGCGGCGGAGGAGGAGACGGTGGAGGAACGGGGAGATGGCCGAGACAAGAAACCCTAACTCTGCTGGAGATTAGATCTCGTCTTGATCATAAATTCAAAGAAGCTAATCAAAAGGGACCTCTTTGGGATGAAGTTTCTAGGATTATGTCTGAGGAACATGGATACCAAAGGAGTGGGAAGAAATGCAGAGAGAAGTTTGAGAATCTTTACAAATACTATAGGAAGACTAAAGAAGGCAAAGCCGGAAGACAAGATGGTAAACACTATAGATTTTTCCGGCAGCTCGAGGCGCTCTACGGCGATTCCAACAATTTGGTTTCTTTTCCCAATCATAACACGCAGTTCATGAGCAATGCTCTTCATGGTTTCCACCCTCAAAACGCTATGAACGTTACTACAACAACGTCTAACGTTCATAACGTTGATAGTGTTCATGGTTTTCATCATCAAAGCCTAAGTCTTTCTAACAACTACAATTCCTCCGAGCTGGAGCTGATGACTTCGTCTTCTGATGGGAATGATTCCAGTAGTAGAAGGAAAAAGAGGAGTTGGAAAGCTAAGATCAAGGAGTTCATTGATGTGAACATGAAAAGGTTGATAGAGAGGCAAGATGTTTGGCTTGAGAAGTTGACAAAGGTTATTGAAGACAAAGAGGAACAAAGGATGATGAAAGAAGAGGAATGGAGAAAGATTGAAGCTGCGAGGATCGATAAAGAGCATTTGTTTTGGGCTAAAGAGAGGGAGAGGATGGAAGCTAGGGATGTAGCGGTGATTGAGGCATTGCAGTATTTGACCGGAAAGCCGTTGATAAAGCCGTCATGTTCGTCCCGAGAAGAGAGGATTAATGGTAATAATGAGGTCCAAAACAATAGTGAGAATCAGAATGAGAATGGAAGCGATCAAACAATGACTAATAATGTTTCTGTTAAAGGAACTGGTAGCTGCTGGAATGAGCAAGAGATCATAAAGCTTATGGAGATAAGAACTAGCATGGACTCGGCGTTTCAAGAGATATTGGGAGGATGCTCGGATGAATTTCTATGGGAGGAAGTCGCCGCAAAATTGATTCAATTAGGGTTTGATCGGAGAAGTGCCTTGTTGTGCAAGGAAAAGTGGGAGTGTATAAGCAATGGAATGATGAAAGAAAAGAAGCAAATCAACAAGAAAAGGAAGGAGAACTCATCGAACTGCGGCGTGTACTATCCAAGAACGAAAGAAAATCCGATTTACAACAATCAAGAAAGTGGATATAATGATAATGATCAGCATCATCAGATGAATGAACAAGGCAACGTAGGTTCTTCAACATCAAACGCAAACGCAGCCGCTGGAAATCCGAGCGGCGCAATGGCGGCCAGTACAAACTGCTTCCCGTTCTTCATGGGAGATGGAGATCAGAATTTGTGGGAGAGTTATGGTTTGAGGCTAAGTAAAGGAGAGAATCAGTGA
Protein Sequence:
- >Tp6g39040|Thellungiella_parvula|Trihelix|Tp6g39040
MDDHHPQYGIPELRQLMKGGARTTTAASPSTSSHFPSDFFGFNLAPAAPQHQRLHQFTTDQEMGFLPRGIHGLGGGSSTAGNNCNLNASTSGGGVGFSGFLDGGGLGGGGGGDGGGTGRWPRQETLTLLEIRSRLDHKFKEANQKGPLWDEVSRIMSEEHGYQRSGKKCREKFENLYKYYRKTKEGKAGRQDGKHYRFFRQLEALYGDSNNLVSFPNHNTQFMSNALHGFHPQNAMNVTTTTSNVHNVDSVHGFHHQSLSLSNNYNSSELELMTSSSDGNDSSSRRKKRSWKAKIKEFIDVNMKRLIERQDVWLEKLTKVIEDKEEQRMMKEEEWRKIEAARIDKEHLFWAKERERMEARDVAVIEALQYLTGKPLIKPSCSSREERINGNNEVQNNSENQNENGSDQTMTNNVSVKGTGSCWNEQEIIKLMEIRTSMDSAFQEILGGCSDEFLWEEVAAKLIQLGFDRRSALLCKEKWECISNGMMKEKKQINKKRKENSSNCGVYYPRTKENPIYNNQESGYNDNDQHHQMNEQGNVGSSTSNANAAAGNPSGAMAASTNCFPFFMGDGDQNLWESYGLRLSKGENQ