Information report for Sp_057020_iign.t1
Gene Details
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Functional Annotation
- Refseq: XP_021862889.1 — copper-transporting ATPase HMA4-like isoform X1
- Swissprot: Q6H7M3 — HMA4_ORYSJ; Copper-transporting ATPase HMA4
- TrEMBL: A0A0K9RLX4 — A0A0K9RLX4_SPIOL; Uncharacterized protein
- STRING: XP_010673611.1 — (Beta vulgaris)
- GO:0030001 — Biological Process — metal ion transport
- GO:0098655 — Biological Process — cation transmembrane transport
- GO:0016021 — Cellular Component — integral component of membrane
- GO:0000166 — Molecular Function — nucleotide binding
- GO:0005507 — Molecular Function — copper ion binding
- GO:0019829 — Molecular Function — cation-transporting ATPase activity
Family Introduction
- GT factors constitute a plant-specific transcription factor family with a DNA-binding domain that binds GT elements. The DNA-binding domain of GT factor, rich in basic and acidic amino acids and proline and glutamine residues, features a typical trihelix (helix-loop-helix-loop-helix) structure that determines the specific binding of GT elements; thus GT factors are also called trihelix transcription factors. GT elements are highly degenerate cis-elements with A/T-rich core sequences (Villain et al. 1996; Wang et al. 2004). Interaction between GT factors and GT elements has been implicated in the complex transcriptional regulation of many plant genes.
Literature and News
Sequences
CDS Sequence:
- >Sp_057020_iign.t1|Spinacia_oleracea|Trihelix|Sp_057020_iign.t1
ATGGAAGTCAATGGAAAGTCTGACTTAAATGTTCCGTTATTGGAAGCTCAGGATAGTGTGACGGTTAACATTTCTCCACCAACTCCATATGACGATAAGAAGATTAAAACGGCGAAATTCAAGATAAAGGGTATTGAGTGTGGATCTTGCACGACCTCAGTAGAATCTGTGGTAGGGAAGCTTAATGGAGTTGTGACTGTGGTTGTATCACCAATGGATGGGCAAACTGTTGTCAAATACATGCCAGAGATGGTTGATCCAAAAAGAATAAGAGAAACCGTAGAAAATGCAGGATTTCAAGTTGAAGGTTATCCGGAGCAAGAAATAGAAGTATGTCGACTGAAAATAAAAGGAATGGCATGCACCAGCTGCTCGGAGTCTGTTGAAAGAGCCCTTTTGGTAGCTGATGGAGTGAAAAAGGCTGTGGTTGGTCTTTCTCTCGAGGAAGCCAAGGTTCATTTTGACCCAAATGTCACAAACCCCAGCAAAATCATAGAAGCAGTAGAAGATTCTGGTTTTGAAGCTGATCTTATTAACCCAGGTAATGATGTGAACAAAGTGCACCTAAAGCTTGACGGAGTTCATTCCCTTGAAGATGTTTCGACTATCAGAATTGCTCTTGAGTTAGCAGTTGGTGTTAATCATGTTGACATTGATATGGAAGGGAAAAAAACCACTGTAAGCTATGATCCTGATGTTACTGGTCCTAGGTCTCTGATAAAATGCATCAGAGAGGCTTCTGTCGGTGTAACTTGTTATGATGCGAGCTTGTATGTCCCTCCAAGACAGAGAGATCTGGATCATTGGAATGAGATCCAAATGTACAGGAATCAGTTCTTATGGAGTTGCCTTTTTTCTGCCCCAGTATTTGTTTTTTCAATGGTACTCCCAATGCTTCCACCTTATGGGGATTGGTTAGACTACAGGATACACAATATGCTTACTATTGGAATGCTGCTAAGATGTATCCTTTGCGCACCAGTGCAGTTTGTCATCGGACGGAGGTTTTACATTGGGGCATATCATGCGTTGAGGAGAAAATCTGCTAATATGGATGTTCTGGTGGCTGTGGGAACAAATGCTGCTTACCTCTACTCTCTCTACATATTATTTAAAGCTTTGACTTCCAATGACTTTGAAGGGCAAGATTTTTTTGAGACTAGTGCTATGTTAATATCTTTTATACTTTTGGGCAAGTATTTGGAGATTGTGGCAAAAGGGAAGACGTCAGATGCTTTAGCAAAGTTATCCGAGCTTGCTCCAGATACGGCGTGCTTGGTAACCATAGACGGTAATGGAAATGTCACCTCAGAAACAGAAATAAGCACTCAACTCATACAGCGGAATGACTTGTTTAAGATTGTTCCTGGGGAAAAGGTCCCTGTTGATGGGATTGTTATTGATGGTCAAAGCTATGTAAATGAGAGTATGATCACAGGAGAAGCAGTGCCAGTTGCCAAAAGACCTAGTGATAAGGTCATTGGTGGGACTGTAAATGAGAATGGCTGCATCATAGTAAAGGCCACACATGTCGGGTCAGAGACTGCCCTTTCTCAGATTGTTCAGCTTGTGGAGGCTGCACAGTTGGCCAGAGCCCCTGTTCAGAAATTGGCTGACCAAATCTCAAGGTTTTTTGTTCCAACTGTTGTTGCTGCAGCATTTATTACATGGTTAGCATGGTTTGTTACCGGAGTAGCTGGTGTTTATCCAAAACATTGGATCCCAAAAGCCATGGACAAATTTGAACTGGCTCTGCAGTTTGGAATATCTGTTGTTGTGGTTGCTTGTCCATGTGCTCTGGGACTGGCGACTCCTACTGCTGTCATGGTCGCCACTGGCAAGGGTGCTTCACTAGGTGTGCTCATCAAGGGGGGATCTGCACTTCAAAAGGCGCACAAGGTTAAAGCTGTGGTCTTTGACAAGACAGGAACGTTGACGGTAGGAAAGCCAGTTGTTGTCAATGCTGTTCTCTTTTCTGGGGTTACACTGGAGGAGTTATGCAACATGACAATTGCCATAGAGGCAAACAGTGAGCACCCCTTAGCAAAAGCTGTAGGTGCACACGCTAAGACCTTACGCAAGAAACATCAATCATTGGCTGACCATGTTGAAGATGCAAAGGATTTTGAGGTGCACCCCGGAGCCGGAGTTGGTGGAAAGGTCGGTGACAAGATAGTTTTGGTGGGAAACAAGAGACTCCTACAAGTTTATAATGTGCCAATCAACGATGAGATTAAGGAGTATATCTCAAAAACAGAGAATTTGGCCCGAACTTGCGTGTTAGTTGCCATTGATGGCAAAGTTGGTGGGGCCTTTTCTGTGACTGATCCAGTGAAGCCAGAGGCAGCTCGTGTCGTTAGATTTCTCCAGTCTATGGGCATCTCAAGCATCATGGTAACTGGTGATAACTGGGGTACTGCAACAGCAATAGCAAGAGAAGTTGGGATTAATCAAGTTTTTGCCGAAACTGACCCAATTGGAAAAGCTGAGAAGATCAAAGAAATTCAGATGAAAGGCGTAACAGTGGCAATGGTGGGAGACGGGATTAACGATTCCCCCGCCTTAGTTGCAGCTGATGTCGGAATGGCAATAGGCGCTGGCACTAACGTTGCTATTGAGGCAGCTGATATAGTTCTCATCAAGAGCAACCTAGAAGACGTGGTGACAGCCATCGATCTATCTCGAAAGACAATGTCCAAGATCCGGCTAAATTACGTGTGGGCCCTCGGCTATAATGTCTTAGCCATGCCAATTGCTGCTGGAATTTTATTCCCCTTCACCGGGATTCGGCTTCCGCCTTGGGTTGCTGGTGCTTGTATGGCTGCTTCATCTGTTAGTGTGGGATACGTTCATATTGAGATGGATAGGTCGGGTTTAGGAGGCGGGTTTTTATCCGGATCCAATGTTCGATTACTGGATATGGAAATGCCGGTGGATAAGCTCCAACAAACTCAGATGGGTCATCAATTAATGACCCATCAATCTCTTGAATTACATCCCTTAAACATGATGAGTAGTATTGAAAATGAGCACCCGTTAGGGTTTATAGAGGCGAAAGGGTTATCGTTGAAGGGTATGTCTATGGATTTCGGTAAAGGGAAGGGAATATCTCTTAATAATAATACTTCTAGTGAAGATGATGAACCAAGTTATTATACAGGGGATGATGTAAATGGTGAAAATTGTTGTTTGGTTAAAGATACAAAGGAATCACCGTGGCAAAGGATGAAGTGGACCGATAACATAATTAGGCTTCTAATAGCAGTTGTTGCTTCTGTTGGGGATGAGGGAATGTTTGAAGCTAAAGATGGTTTAAAGAGGAAATCTGGAATGTTGTTGCAGAAAAAGGGGAAATGGAAAATGGTCTCAAATATCATGATTAGTAAAGGTTGTTGTGTTTCTCCTCAACAATGTGAGGACAAGTTCAATGACTTGAATAAAAGATACAAGAAGTTGAATGACATTCTCGGTAGGGGAACTAGTTGCCAAGTGGTGGAAAAGCCGTGTTTGATGGATGCAATGCCGCATTTGACAGAAAAGGCGAAGGATGAGGTGAAGAAGATTTTGAGTTCGAAACATTTGTTTTATCGAGAAATGTGCGCGTTTCATAATGGTCAGAGAATACCGGGATGTCACGACATTGATTTACAGGCTCATTTATTGCCTCAGCCAAATGAGAACAACAATGCTTCTGAGATCCATGAAGCTGATGAAAATTATGAGTCAGAAAGTGATGATGACTCGTATGAAGATGATGATGAGAAGAATTTTGATACCAAATCTGTGAGAATTGAGGGATGTTTTGCAAAAAGCAGCATGAATGGAGGAAGCAACACTAACTTCCCTTTAATGGAGACAATGTTTCAGGATGTTGCAAAGTCACCGTTAGAACAAAGATCGTTGATTCAGCAGCAAATGTGGCAACTTGAGGTGCAGAAGGTTAAGTTGCAGGGTGAAGCACTTGAACTTGAGAAACAGCGGCTTAAATGGTTGAGATTTCGAAGCAAGAAAGATAGAGAGATTGAGAGATTGAGGTTGGAGAATGAAAGGGGGAAACTTGAGAATGATCGGATGGTTTTGTTGCTTAAACAGAAGGAAATGATGCTAGGTATGCCAAAGTCAGATACATTGTTGGAGCCCATTTCCCTTAGCATTGATAGACTCCAAGGTAGAGATGGAAATCATGGAATAAAAGCAGATAGGCATCTGTAA
Protein Sequence:
- >Sp_057020_iign.t1|Spinacia_oleracea|Trihelix|Sp_057020_iign.t1
MEVNGKSDLNVPLLEAQDSVTVNISPPTPYDDKKIKTAKFKIKGIECGSCTTSVESVVGKLNGVVTVVVSPMDGQTVVKYMPEMVDPKRIRETVENAGFQVEGYPEQEIEVCRLKIKGMACTSCSESVERALLVADGVKKAVVGLSLEEAKVHFDPNVTNPSKIIEAVEDSGFEADLINPGNDVNKVHLKLDGVHSLEDVSTIRIALELAVGVNHVDIDMEGKKTTVSYDPDVTGPRSLIKCIREASVGVTCYDASLYVPPRQRDLDHWNEIQMYRNQFLWSCLFSAPVFVFSMVLPMLPPYGDWLDYRIHNMLTIGMLLRCILCAPVQFVIGRRFYIGAYHALRRKSANMDVLVAVGTNAAYLYSLYILFKALTSNDFEGQDFFETSAMLISFILLGKYLEIVAKGKTSDALAKLSELAPDTACLVTIDGNGNVTSETEISTQLIQRNDLFKIVPGEKVPVDGIVIDGQSYVNESMITGEAVPVAKRPSDKVIGGTVNENGCIIVKATHVGSETALSQIVQLVEAAQLARAPVQKLADQISRFFVPTVVAAAFITWLAWFVTGVAGVYPKHWIPKAMDKFELALQFGISVVVVACPCALGLATPTAVMVATGKGASLGVLIKGGSALQKAHKVKAVVFDKTGTLTVGKPVVVNAVLFSGVTLEELCNMTIAIEANSEHPLAKAVGAHAKTLRKKHQSLADHVEDAKDFEVHPGAGVGGKVGDKIVLVGNKRLLQVYNVPINDEIKEYISKTENLARTCVLVAIDGKVGGAFSVTDPVKPEAARVVRFLQSMGISSIMVTGDNWGTATAIAREVGINQVFAETDPIGKAEKIKEIQMKGVTVAMVGDGINDSPALVAADVGMAIGAGTNVAIEAADIVLIKSNLEDVVTAIDLSRKTMSKIRLNYVWALGYNVLAMPIAAGILFPFTGIRLPPWVAGACMAASSVSVGYVHIEMDRSGLGGGFLSGSNVRLLDMEMPVDKLQQTQMGHQLMTHQSLELHPLNMMSSIENEHPLGFIEAKGLSLKGMSMDFGKGKGISLNNNTSSEDDEPSYYTGDDVNGENCCLVKDTKESPWQRMKWTDNIIRLLIAVVASVGDEGMFEAKDGLKRKSGMLLQKKGKWKMVSNIMISKGCCVSPQQCEDKFNDLNKRYKKLNDILGRGTSCQVVEKPCLMDAMPHLTEKAKDEVKKILSSKHLFYREMCAFHNGQRIPGCHDIDLQAHLLPQPNENNNASEIHEADENYESESDDDSYEDDDEKNFDTKSVRIEGCFAKSSMNGGSNTNFPLMETMFQDVAKSPLEQRSLIQQQMWQLEVQKVKLQGEALELEKQRLKWLRFRSKKDREIERLRLENERGKLENDRMVLLLKQKEMMLGMPKSDTLLEPISLSIDRLQGRDGNHGIKADRHL