Gene Details:

• Gene ID: Solyc03g122030.1.1
• Gene Name: LOC101257846
• Gene Family: Trihelix Family
• Description: Trihelix Family protein
• Species: Solanum lycopersicum
• Source: Trihelix family gene from PlantTFDB

Protein Features:

• Pfam:  PF13837
• PROSITE profile:  PS50090
• InterPro:  IPR017877

Annotation Proteins:

• Refseq:  XP_004235567.1  — trihelix transcription factor ASIL2
• Refseq:  XP_025886017.1  — trihelix transcription factor ASIL2
• Swissprot:  Q9LJG8  — ASIL2_ARATH; Trihelix transcription factor ASIL2
• TrEMBL:  A0A3Q7GLR1  — A0A3Q7GLR1_SOLLC; Uncharacterized protein
• STRING:  Solyc03g122030.1.1  — (Solanum lycopersicum)

Gene Ontology:

• GO:0009793  — Biological Process — embryo development ending in seed dormancy
• GO:0010029  — Biological Process — regulation of seed germination
• GO:0010431  — Biological Process — seed maturation
• GO:0048831  — Biological Process — regulation of shoot system development
• GO:0005730  — Cellular Component — nucleolus
• GO:0043565  — Molecular Function — sequence-specific DNA binding
• GO:0044212  — Molecular Function — transcription regulatory region DNA binding

Family Introduction:

• GT factors constitute a plant-specific transcription factor family with a DNA-binding domain that binds GT elements. The DNA-binding domain of GT factor, rich in basic and acidic amino acids and proline and glutamine residues, features a typical trihelix (helix-loop-helix-loop-helix) structure that determines the specific binding of GT elements; thus GT factors are also called trihelix transcription factors. GT elements are highly degenerate cis-elements with A/T-rich core sequences (Villain et al. 1996; Wang et al. 2004). Interaction between GT factors and GT elements has been implicated in the complex transcriptional regulation of many plant genes.

Literature:

• Systematic analysis of GT factor family of rice reveals a novel subfamily involved in stress responses.   DOI:  10.1007/s00438-009-0507-x ;  PMID:  20039179

Sequences: