Information report for Sme2.5_04709.1_g00010.1
Gene Details
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Functional Annotation
- Refseq: XP_006351819.1 — PREDICTED: uncharacterized protein LOC102593487
- Refseq: XP_006351820.1 — PREDICTED: uncharacterized protein LOC102593487
- Refseq: XP_006351821.1 — PREDICTED: uncharacterized protein LOC102593487
- Refseq: XP_015166145.1 — PREDICTED: uncharacterized protein LOC102593487
- TrEMBL: M1CWV8 — M1CWV8_SOLTU; Uncharacterized protein
- STRING: PGSC0003DMT400076504 — (Solanum tuberosum)
Family Introduction
- GT factors constitute a plant-specific transcription factor family with a DNA-binding domain that binds GT elements. The DNA-binding domain of GT factor, rich in basic and acidic amino acids and proline and glutamine residues, features a typical trihelix (helix-loop-helix-loop-helix) structure that determines the specific binding of GT elements; thus GT factors are also called trihelix transcription factors. GT elements are highly degenerate cis-elements with A/T-rich core sequences (Villain et al. 1996; Wang et al. 2004). Interaction between GT factors and GT elements has been implicated in the complex transcriptional regulation of many plant genes.
Literature and News
Sequences
CDS Sequence:
- >Sme2.5_04709.1_g00010.1|Solanum_melongena|Trihelix|Sme2.5_04709.1_g00010.1
ATGGCAGATGCAGAAGATATTCAACCCCTTGTGTGTGATAATGGGACTGGAATGGTTAAGGCTGGATTTGCTGGTGATGATGCACCAAGGGCTGTTTTTCCTAGTATTGTTGGTCGACCTCGACACACTGTGCCAATCTATGAAGGTTATGCCCTTCCTCACGCAATTCTTCGGTTGGATCTAGCTGGGCGTGATCTTACTGATTGTCTGATGAAAATCCTGACTGAAAGAGGTTATTCATTCACCACTAGCGCTGAACGGGAAATTGTCCGAGATATGAAAGAGAAACTAGCATATGTTGCACTTGACTATGAGCAAGAATTGGAGACCGCAAAGAGTAGCTCTGCTGTTGAAAAAACTTATGAGTTGCCAGATGGTCAGGTGATTACCATTGGAGCAGAGAGGTTCAGATGCCCGGAAGTCTTATTCCAGCCATCCCTTGTGGGAATGGAAACTGCTGGAATCCATGAAACAACTTACAACTCCATCATGAAGTGCGATGTAGATATCAGAAAGGATCTGTATGGCAACATTGTCCTCAGTGGTGGAACAACGATGTTTCCTGGTATCGCTGATCGTATGAGCAAGGAGATCACTGCTCTTGCTCCCAGCAGCATGAAGATCAAGGTGGTGGCGCCTCCTGAACGGAAGTACAGTGTCTGGATTGGAGGGTCTATCTTAGCTTCTCTCAGCACCTTCCAACAGGTTGGATATGTTGTTGTTGCTGACAGTTCGGACACTGTTGATATTTCTTGGGACATTAGATGGAAGAGAAGACGTACTGTCTTTCATATGACTTATTTGGAGCCGAGGTTCTTTTGGAAACAACCTCCCTGCCTCCACAAGGTAAAGGTTAGGTCTGGGCACACTCTACCCTCCCCAAAACCCACCAGTGGGATTACATTGGGATTAAGTGGACAGCTCGGTTTGTTCAGGTCAATGCAAGTTAATCACCATCTAGCTGGTTACCCTAACCAGGGTCCAGTGGTTCTTATGCAGCATGCTCCACAAGTGATGTCCTTTAGTGTAAGCAACATGGAAGACACCCCCCAAGAAATGCAGTTGCTTGATCCTGTCAGATTCAATAGAATTGAGATGCCTGAAGCGTATCATGCGGGTTTGAATGACGTAAGAGAAGTCTCTGGACATCCTGAAGAGAAGCGGCCAGTGTATCAGCGTATGAGATGGTCAGATGACATGGTTAAGCTTTTGATTACTGCTCTTTCTTACATCGGAGAAGATGCTTTGTGCAATGGAGTTTTAGTCAAGAAGGGTAAATGGAGGGCCATTTCCTTTGTTATGGCTGAAAGAGGTTATCGTGTGTCACCTCAGCAATGTGAGGATAAGTATAATGATCTGAACAAAAAATATAGGAGACTGAATGATGTAATTGGGAGAGGTACTGCATGTAATGTTGTCCAGAACCCTATGCTGCTGGAAAGGATGGACCTATCTTACGATTTGAAAGATGAAATGAGCAAAATTTTAGGTAGCAGACAATTGTTCTATGAAGAAATGTGCTCATACAGCAATCGGAATAGATTATTCCTTCCCCATGATCCGGAGGTTCAGCAATCTGTGTTTCGGGCTGTGAGAGGTAAATATAAGTATGAAAGTGGAAGCACGTCACGGGATTTGCCTTTGAAGAGGAAGATGGGAGGAGAAGAAAGAGTTTGTAATATACCCTCGGCATCACTGGATCTGAATGTGGTGCAGGATATGCCTGCAAAAAGGAAAGTAGGAGGCAAAGAAAGTAATTTGTATATGGCCCGTTCATCTCTGAATGGTACCACTACATTAGATGCATATCCAAAAGTGTTTTATCCTAAGAGCAATGGGATTCACTTTTCTATGAACAATAAGGAGAAACAAAAACAGGATGAGCATATTCTCCCTCGCTTACAGCAATTGGAAAAACAAAAGCTACAGATTGGGGCTCAAATTCTGAAATTGGAGAAGCAGTGGTTCAACTTCACGAGTTGGTGCAGTAAAGAAGACAGGGAGCTACAAAAGATGCGAATGGATAATGATGTTATCAAGCTTGAGAATCAGCAACTGATGCTTGAACTCAATAGTGGTGGAAAGCAGTGTTTTGACTGA
Protein Sequence:
- >Sme2.5_04709.1_g00010.1|Solanum_melongena|Trihelix|Sme2.5_04709.1_g00010.1
MADAEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTVPIYEGYALPHAILRLDLAGRDLTDCLMKILTERGYSFTTSAEREIVRDMKEKLAYVALDYEQELETAKSSSAVEKTYELPDGQVITIGAERFRCPEVLFQPSLVGMETAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGTTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQVGYVVVADSSDTVDISWDIRWKRRRTVFHMTYLEPRFFWKQPPCLHKVKVRSGHTLPSPKPTSGITLGLSGQLGLFRSMQVNHHLAGYPNQGPVVLMQHAPQVMSFSVSNMEDTPQEMQLLDPVRFNRIEMPEAYHAGLNDVREVSGHPEEKRPVYQRMRWSDDMVKLLITALSYIGEDALCNGVLVKKGKWRAISFVMAERGYRVSPQQCEDKYNDLNKKYRRLNDVIGRGTACNVVQNPMLLERMDLSYDLKDEMSKILGSRQLFYEEMCSYSNRNRLFLPHDPEVQQSVFRAVRGKYKYESGSTSRDLPLKRKMGGEERVCNIPSASLDLNVVQDMPAKRKVGGKESNLYMARSSLNGTTTLDAYPKVFYPKSNGIHFSMNNKEKQKQDEHILPRLQQLEKQKLQIGAQILKLEKQWFNFTSWCSKEDRELQKMRMDNDVIKLENQQLMLELNSGGKQCFD