Information report for SapurV1A.0047s0660.1.p
Gene Details
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Functional Annotation
- Refseq: XP_011004380.1 — PREDICTED: trihelix transcription factor GTL1-like isoform X1
- TrEMBL: G8G9Q9 — G8G9Q9_POPCN; GTL1
- STRING: POPTR_0001s45870.1 — (Populus trichocarpa)
Family Introduction
- GT factors constitute a plant-specific transcription factor family with a DNA-binding domain that binds GT elements. The DNA-binding domain of GT factor, rich in basic and acidic amino acids and proline and glutamine residues, features a typical trihelix (helix-loop-helix-loop-helix) structure that determines the specific binding of GT elements; thus GT factors are also called trihelix transcription factors. GT elements are highly degenerate cis-elements with A/T-rich core sequences (Villain et al. 1996; Wang et al. 2004). Interaction between GT factors and GT elements has been implicated in the complex transcriptional regulation of many plant genes.
Literature and News
Sequences
CDS Sequence:
- >SapurV1A.0047s0660.1.p|Salix_purpurea|Trihelix|SapurV1A.0047s0660.1.p
ATGCAGCAAGAAGGTGGGGAAGGAGGGTCGCCACCGTCACAGTATGGAGTGTCACACCAGCAACAAGGTGATGCTCCGATAACAGCTCCTCCATCTGCTGCACTAGAAACACACATGCAGCAGCAGCAGCAGCAGCAGCAGCAAGTTGTAGAGGAAGCATCGCCCATTAGCAGCAGACCTCCCGCCACAACAAGCGGGGTTATGAATTTAGATGAATTTATGAGACTTTCAGGGAGCGGCGGTGCAGAAGAAGATAGCGGCGCTGGAGAAGATGCCGATCGAACAGGAGGTGTTGCTAGTGGCAATAGGTGGCCAAGGCAAGAAACTCTTGCCCTTCTGCAGATTAGGTCTGAAATGGATGCTACTTTTCGTGATGCCACCTTAAAAGGTCCTCTATGGGAGGATGTTTCAAGGAAGCTAGCAGAGATGGGATTCAAGAGAAATGCCAAGAAATGTAAAGAAAAGTTTGAAAACGTGCACAAGTATTATAAAAGAACAAAGGAAGGTAGAGCTGGTCGTCAGGATGGCAAAAGATACAGGTTTTTCAGCCAGCTTGAAGCTTTGCATAATACTACTGGTGGCGGTGGCGCTTCTGCTAGTGTCATCAATTTGACCGGTGCTGCTCCTCAGCAGATTGCCACACCATTAACGAGCAGCCTGGATGTTGCTCCTGTTTCTGTTGGATTTCCTATGCCTATCTCGTCTTCTGTTAGAATCCCTCCGCCTTCTTCTCAGGCACTTCAACCAGCTTCAAATATTGGCTCGATGTTTCCTCCTGATTTGGGGGCAACAGCGGCCGCAGCTGCTGCGCCTCCGGCAGCTGGTGCTGGCCCTGCTGGAATCAGCTTCTCGTCGAATGGGTCTTCTTCTTCTCCAAGTTCTGAAGATGACGACGACGAGGATGAAGAGCTGTTAGGAGGGCAGCCATCGGCTACGGCGGCTGGTACGAGTCGAAAACGTAAAAGGGCAGCATTATCGTCAGCTAGAGGAGAAACTCATCGGATGATGGAGTTTTTTGAGGGGCTAATGAAACAGGTCATGCAGAAGCAGGAGGCGATGCAACAGAGATTTTTGGAGGCGATTGAGAAGAGAGAGCAAGACAGGATGATAAGAGATGAAGCTTGGAAAAGGCAAGAGATGGCTAGACTGAGTCGCGAACATGAGATTATGGCTCAAGAAAGGGCTATTTCTGCTAGTCGAGATGCTGCTATTGTTGCCTTTCTACAGAAAATTACTGGCCAAACTATTCATTTGCCTACGTCTGTATCAATGGCTCCTCCATTTTCACTACCTCCACCACCACCACCCCAACTACCAGAACCGGTTCAAATAACGCCATTGGTCACTGTCTCAACCCAGCCACCACCAACACAACCTCAAACCATTCCACAACCACAAGTAACACTACCCCAACAGCAGCAGCAGCAGTACCAACAAGGGCATCGTCAACACCAACTATCCATTTCTTCAGATATAGTAATGGCGGTCCCGGAACAACAAAGAGCACCACAGGAAATTGGAAGTGGTGGCGGTAGTGGGAGCGAGCCAGCGTCGTCGAGATGGCCAAAGCCGGAAGTTCTTGCACTTATAAAGTTGAGAAGCGGGCTTGAAACTAGATACCAAGAAGCTGGGCCTAAGGGGCCACTTTGGGAAGAAATATCAGCAGGAATGCAAAGGATGGGCTATAGAAGAAGTGCCAAAAGATGCAAAGAAAAATGGGAGAATATCAACAAGTACTTCAAGAAAGTAAAAGAAAGTCACAAAAATCGCCCAGAAGATGCCAAGACTTGCCCTTATTTTCATGAACTTGATGCCCTTTACAGGAAAAAGATACTTGGTGGAAGTAGTGGTGGTGGTGGTGGTGGTGGTGGAAGCACCTCCACTAGTGGCTTTGACAGCCAAAGTAGGCCACAGGAGCAGCAGCAGCAGCAAGAGAGCTTAAAATTGGACCCAATGCCACATCCAATGCAGCAGCCACCACAACAGACACAAGCCACAGAATCACAAAATAAAAATGGGGCTGGTGGTGCTGTTCAAGCAAGCAATATAGGGCTGTCTGGGAGTCTCCCTGGTGAAGGAAATGGAGGAGCATCGAAGCCAGAAGACATCGTGAAGGAGTTGAAGAAACAGCAGGGGACTCATCAACAACAACATTTAATGGTTGATTACTACGATAAGATGGAGGAAGGTGACAGAGAAAACGTAAATGAAGATGAATACGATGACGAAGACGAGGGCGAGGAAGATGAGGAGGAGGAGGAGGAGGCGGAGGGGTTGCAGGAGGAGAGGAAAATGGCATACAAGATCGAGTTCCAAAGGCAGAACACAAGTAGCGCCGCCAATGGAGGAGGGACGGGGGCGCCACCCTCTTTTTTGGCCATGGTTCAATAG
Protein Sequence:
- >SapurV1A.0047s0660.1.p|Salix_purpurea|Trihelix|SapurV1A.0047s0660.1.p
MQQEGGEGGSPPSQYGVSHQQQGDAPITAPPSAALETHMQQQQQQQQQVVEEASPISSRPPATTSGVMNLDEFMRLSGSGGAEEDSGAGEDADRTGGVASGNRWPRQETLALLQIRSEMDATFRDATLKGPLWEDVSRKLAEMGFKRNAKKCKEKFENVHKYYKRTKEGRAGRQDGKRYRFFSQLEALHNTTGGGGASASVINLTGAAPQQIATPLTSSLDVAPVSVGFPMPISSSVRIPPPSSQALQPASNIGSMFPPDLGATAAAAAAPPAAGAGPAGISFSSNGSSSSPSSEDDDDEDEELLGGQPSATAAGTSRKRKRAALSSARGETHRMMEFFEGLMKQVMQKQEAMQQRFLEAIEKREQDRMIRDEAWKRQEMARLSREHEIMAQERAISASRDAAIVAFLQKITGQTIHLPTSVSMAPPFSLPPPPPPQLPEPVQITPLVTVSTQPPPTQPQTIPQPQVTLPQQQQQQYQQGHRQHQLSISSDIVMAVPEQQRAPQEIGSGGGSGSEPASSRWPKPEVLALIKLRSGLETRYQEAGPKGPLWEEISAGMQRMGYRRSAKRCKEKWENINKYFKKVKESHKNRPEDAKTCPYFHELDALYRKKILGGSSGGGGGGGGSTSTSGFDSQSRPQEQQQQQESLKLDPMPHPMQQPPQQTQATESQNKNGAGGAVQASNIGLSGSLPGEGNGGASKPEDIVKELKKQQGTHQQQHLMVDYYDKMEEGDRENVNEDEYDDEDEGEEDEEEEEEAEGLQEERKMAYKIEFQRQNTSSAANGGGTGAPPSFLAMVQ*